BLASTX 7.6.2
Query= UN08315 /QuerySize=997
(996 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G02470.1 | Symbols: | FUNCTIONS IN: molecular... 302 2e-082
TAIR9_protein||AT1G02470.2 | Symbols: | FUNCTIONS IN: molecular... 298 5e-081
TAIR9_protein||AT1G02475.1 | Symbols: | FUNCTIONS IN: molecular... 198 6e-051
TAIR9_protein||AT4G01883.1 | Symbols: | LOCATED IN: chloroplast... 171 8e-043
>TAIR9_protein||AT1G02470.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase
(InterPro:IPR005031); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G02475.1); Has 276 Blast hits to 276 proteins
in 86 species: Archae - 0; Bacteria - 162; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 85 (source: NCBI BLink). |
chr1:511916-513573 REVERSE
Length = 221
Score = 302 bits (773), Expect = 2e-082
Identities = 158/227 (69%), Positives = 182/227 (80%), Gaps = 8/227 (3%)
Frame = +3
Query: 123 MSSIVSGTVPTTKSSACFRRIQKSATFSSRSMLLSSSSSPPASAKLLNSANGSSSSSSSP 302
MSSI SGTV TT+S+ CFR+I KSAT SML SSSS P LL+S++ +S+ +
Sbjct: 1 MSSIASGTVSTTRSTLCFRKIPKSATV--LSMLHRSSSSSPRMLLLLSSSSANSAKLLNS 58
Query: 303 KPFRPVMRSREADKLEEERLLHVQWQDVTVKMAVDAPASVAYKLYADRELFPRWMPFLSS 482
+ S + + +QWQDVTVKM VDAPASVAYKLYADRE+FP+WMPFLSS
Sbjct: 59 NNGLLISSSPKPFRPV------MQWQDVTVKMVVDAPASVAYKLYADREMFPKWMPFLSS 112
Query: 483 VEAVEGSPDLSRYLVKLESFGNKFEYYFLAKNLEPIQDRKLHWRSIEGFANRGSVRFFPR 662
VEA+EGSPDLSRYLVKLESFG EY+FLAKNL+PI DRK+HWRSIEGF NRGSVRFFPR
Sbjct: 113 VEAMEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIPDRKIHWRSIEGFENRGSVRFFPR 172
Query: 663 GPSSCLVEINFSFEVPHAFAPVAFLMKPFMERLIRGGLERFAAFVKT 803
GPSSCLVEI+FS+EVP+AFAPVAF MKPFME++IRGGLERFAAFVKT
Sbjct: 173 GPSSCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGGLERFAAFVKT 219
>TAIR9_protein||AT1G02470.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 4
anthesis, C globular stage, petal differentiation and expansion stage;
CONTAINS InterPro DOMAIN/s: Streptomyces cyclase/dehydrase
(InterPro:IPR005031); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G02475.1); Has 273 Blast hits to 273 proteins
in 85 species: Archae - 0; Bacteria - 160; Metazoa - 0; Fungi - 0;
Plants - 29; Viruses - 0; Other Eukaryotes - 84 (source: NCBI BLink). |
chr1:511916-513573 REVERSE
Length = 222
Score = 298 bits (761), Expect = 5e-081
Identities = 158/228 (69%), Positives = 182/228 (79%), Gaps = 9/228 (3%)
Frame = +3
Query: 123 MSSIVSGTVPTTKSSACFRRIQKSATFSSRSMLLSSSSSPPASAKLLNSANGSSSSSSSP 302
MSSI SGTV TT+S+ CFR+I KSAT SML SSSS P LL+S++ +S+ +
Sbjct: 1 MSSIASGTVSTTRSTLCFRKIPKSATV--LSMLHRSSSSSPRMLLLLSSSSANSAKLLNS 58
Query: 303 KPFRPVMRSREADKLEEERLLHVQWQDVT-VKMAVDAPASVAYKLYADRELFPRWMPFLS 479
+ S + + +QWQDVT VKM VDAPASVAYKLYADRE+FP+WMPFLS
Sbjct: 59 NNGLLISSSPKPFRPV------MQWQDVTRVKMVVDAPASVAYKLYADREMFPKWMPFLS 112
Query: 480 SVEAVEGSPDLSRYLVKLESFGNKFEYYFLAKNLEPIQDRKLHWRSIEGFANRGSVRFFP 659
SVEA+EGSPDLSRYLVKLESFG EY+FLAKNL+PI DRK+HWRSIEGF NRGSVRFFP
Sbjct: 113 SVEAMEGSPDLSRYLVKLESFGQNIEYHFLAKNLQPIPDRKIHWRSIEGFENRGSVRFFP 172
Query: 660 RGPSSCLVEINFSFEVPHAFAPVAFLMKPFMERLIRGGLERFAAFVKT 803
RGPSSCLVEI+FS+EVP+AFAPVAF MKPFME++IRGGLERFAAFVKT
Sbjct: 173 RGPSSCLVEISFSYEVPNAFAPVAFAMKPFMEKIIRGGLERFAAFVKT 220
>TAIR9_protein||AT1G02475.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Streptomyces
cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT4G01883.1); Has 350 Blast
hits to 350 proteins in 105 species: Archae - 0; Bacteria - 211;
Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes -
110 (source: NCBI BLink). | chr1:514110-515331 REVERSE
Length = 220
Score = 198 bits (502), Expect = 6e-051
Identities = 95/179 (53%), Positives = 125/179 (69%), Gaps = 5/179 (2%)
Frame = +3
Query: 273 NGSSSSSSSPKPFRPVMRSREADKLEEERLLHVQWQDVTVKMAVDAPASVAYKLYADREL 452
NG SS SSS RSR + ++WQD +VKM VD P SVAY Y DRE
Sbjct: 47 NGFSSYSSSVS-----RRSRFIIPKRRRFSVSMEWQDCSVKMEVDVPVSVAYNFYLDRES 101
Query: 453 FPRWMPFLSSVEAVEGSPDLSRYLVKLESFGNKFEYYFLAKNLEPIQDRKLHWRSIEGFA 632
FP+WMPF+SSV+ ++ PDLSR+ +K +FG +Y +LA+NL+P ++K+HWRS+EG
Sbjct: 102 FPKWMPFISSVQVLKDKPDLSRWSLKYNAFGQDIKYSWLARNLQPTPNQKIHWRSLEGLP 161
Query: 633 NRGSVRFFPRGPSSCLVEINFSFEVPHAFAPVAFLMKPFMERLIRGGLERFAAFVKTT* 809
N+GSVRFFP+GPSSC+VE+ S+EVP PVA +++PF+E L+RGGLERFAA KTT*
Sbjct: 162 NKGSVRFFPKGPSSCIVELTVSYEVPALLTPVASVLRPFIESLLRGGLERFAALAKTT* 220
>TAIR9_protein||AT4G01883.1 | Symbols: | LOCATED IN: chloroplast; CONTAINS
InterPro DOMAIN/s: Streptomyces cyclase/dehydrase (InterPro:IPR005031);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G02475.1); Has 320 Blast hits to 320 proteins in 96 species:
Archae - 0; Bacteria - 186; Metazoa - 0; Fungi - 0; Plants - 29;
Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink). |
chr4:813162-814800 FORWARD
Length = 225
Score = 171 bits (432), Expect = 8e-043
Identities = 85/204 (41%), Positives = 131/204 (64%), Gaps = 3/204 (1%)
Frame = +3
Query: 201 FSSRSMLLSSSSSPPASAKLLNSANGSSSSSSSPKPFRPVMRSREADKLEEERLLH--VQ 374
F +R+ S+ + P S++L S++ + F P++ + + K R ++
Sbjct: 19 FGNRTFHSRSNFAKP-SSRLFPSSSSPMKPLTLASRFSPLISTNRSFKSSVFRRFDTLME 77
Query: 375 WQDVTVKMAVDAPASVAYKLYADRELFPRWMPFLSSVEAVEGSPDLSRYLVKLESFGNKF 554
WQ+ VKM V+ P SVAY LY++RE P+WM F+SSV+ ++ PDLSR+ +K ++FG
Sbjct: 78 WQECKVKMKVEVPVSVAYGLYSERESIPKWMTFISSVKVLKDKPDLSRWTLKYKAFGQNL 137
Query: 555 EYYFLAKNLEPIQDRKLHWRSIEGFANRGSVRFFPRGPSSCLVEINFSFEVPHAFAPVAF 734
EY +LAKNL+P+ ++K+HW S+EG N+G+VRFFP GPSSC VE+ F++EVP P A
Sbjct: 138 EYAWLAKNLQPLPNQKIHWISLEGLPNKGTVRFFPLGPSSCDVELTFAYEVPLLLIPFAA 197
Query: 735 LMKPFMERLIRGGLERFAAFVKTT 806
++P M+ LI+ LE+FA K+T
Sbjct: 198 ALQPLMQGLIKNSLEQFAEIAKST 221
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,760,199,660
Number of Sequences: 33410
Number of Extensions: 4760199660
Number of Successful Extensions: 173999632
Number of sequences better than 0.0: 0
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