Library    |     Search    |     Batch query    |     SNP    |     SSR  

SwissProt blast output of UN08382


BLASTX 7.6.2

Query= UN08382 /QuerySize=666
        (665 letters)

Database: UniProt/SwissProt;
          518,415 sequences; 182,829,261 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

sp|Q9S7N7|PSAG_ARATH Photosystem I reaction center subunit V, ch...    273   8e-073
sp|P12357|PSAG_SPIOL Photosystem I reaction center subunit V, ch...    208   4e-053
sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, ch...    182   3e-045
sp|Q9SPM4|PSAG_TORRU Photosystem I reaction center subunit V, ch...     87   1e-016
sp|P14224|PSAG_CHLRE Photosystem I reaction center subunit V, ch...     72   2e-012
sp|P20120|PSAG_PEA Photosystem I reaction center subunit V (Frag...     64   1e-009

>sp|Q9S7N7|PSAG_ARATH Photosystem I reaction center subunit V, chloroplastic
        OS=Arabidopsis thaliana GN=PSAG PE=1 SV=1

          Length = 160

 Score =  273 bits (697), Expect = 8e-073
 Identities = 142/162 (87%), Positives = 150/162 (92%), Gaps = 4/162 (2%)
 Frame = +3

Query:  63 MATSASALLTPAT-TAAFSHQNPNSISFHGLRPLRLGGSSSALPKLSTTSGRRSSSSPVV 239
           MATSASALL+P T + A SH+NPNSISFHGLRPLRLGGSSSALPKLSTT   R SSS VV
Sbjct:   1 MATSASALLSPTTFSTAISHKNPNSISFHGLRPLRLGGSSSALPKLSTTG--RKSSSAVV 58

Query: 240 KAELSPSVVISLSTGLSLFLGRFVFFNLQSENVAKQ-VPEQNGKTHFEAGDDRAKEYVSL 416
           +AELSPS+VISLSTGLSLFLGRFVFFN Q ENVAKQ +PEQNGKTHFEAGDDRAKEYVSL
Sbjct:  59 RAELSPSIVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQNGKTHFEAGDDRAKEYVSL 118

Query: 417 LKSNDPVGFNIVDVLAWGSIGHIVAYYVLATSSNGYDPSFFG 542
           LKSNDP+GFNIVDVLAWGSIGHIVAYY+LATSSNGYDPSFFG
Sbjct: 119 LKSNDPIGFNIVDVLAWGSIGHIVAYYILATSSNGYDPSFFG 160

>sp|P12357|PSAG_SPIOL Photosystem I reaction center subunit V, chloroplastic
        OS=Spinacia oleracea GN=PSAG PE=1 SV=1

          Length = 167

 Score =  208 bits (527), Expect = 4e-053
 Identities = 112/165 (67%), Positives = 128/165 (77%), Gaps = 10/165 (6%)
 Frame = +3

Query:  66 ATSASALLTPATT------AAFSHQNPNSISFHGLRPLRLG-GSSSALPKLSTTSGRRSS 224
           A+ +S LL P ++          HQ     SF GLRPL+L   S+++   LS +S RRS 
Sbjct:   6 ASLSSTLLAPCSSKQPQPQQQHQHQQLKCKSFSGLRPLKLNISSNNSSSSLSMSSARRSM 65

Query: 225 SSPVVKAELSPSVVISLSTGLSLFLGRFVFFNLQSENVAKQVPEQNGKTHFEAGDDRAKE 404
           +    +AELSPS+VISLSTGLSLFLGRFVFFN Q EN+AKQVPEQNG +HFEAGD RAKE
Sbjct:  66 T---CRAELSPSLVISLSTGLSLFLGRFVFFNFQRENMAKQVPEQNGMSHFEAGDTRAKE 122

Query: 405 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYVLATSSNGYDPSFF 539
           YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYY+LAT+SNGYDPSFF
Sbjct: 123 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYILATASNGYDPSFF 167

>sp|Q00327|PSAG_HORVU Photosystem I reaction center subunit V, chloroplastic
        OS=Hordeum vulgare GN=PSAG PE=1 SV=1

          Length = 143

 Score =  182 bits (460), Expect = 3e-045
 Identities = 94/130 (72%), Positives = 104/130 (80%), Gaps = 5/130 (3%)
 Frame = +3

Query: 159 LRLGGSSSALPKLSTTS--GRRSSSSPVVKAELSPSVVISLSTGLSLFLGRFVFFNLQSE 332
           LRL  S  A       S   RRS ++   +A L PSVVISLSTGLSL +GRFVFFN Q E
Sbjct:  17 LRLAPSPRAAASFRGVSPPARRSVAA---RAALEPSVVISLSTGLSLVMGRFVFFNFQRE 73

Query: 333 NVAKQVPEQNGKTHFEAGDDRAKEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYVLATS 512
           NVAKQVPEQNGKTHFEAGD+RAKE+  +LKSNDPVGFN+VDVLAWGSIGHIVAYY+LAT+
Sbjct:  74 NVAKQVPEQNGKTHFEAGDERAKEFAGILKSNDPVGFNLVDVLAWGSIGHIVAYYILATT 133

Query: 513 SNGYDPSFFG 542
           SNGYDP FFG
Sbjct: 134 SNGYDPPFFG 143

>sp|Q9SPM4|PSAG_TORRU Photosystem I reaction center subunit V, chloroplastic
        OS=Tortula ruralis GN=PSAG PE=3 SV=1

          Length = 112

 Score =  87 bits (213), Expect = 1e-016
 Identities = 45/103 (43%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
 Frame = +3

Query: 222 SSSPVVKAELSPSVVISLSTGLSLFLGRFVFFNLQSENVAKQ-VPEQNGKTHFEAGDDRA 398
           S++ V     + S +IS ST   L LGRFVF   Q   V++  +PEQNG           
Sbjct:   7 SAAKVTCDGANTSFIISASTAALLALGRFVFLPFQRSMVSRHGLPEQNGVPTTRRVTAVR 66

Query: 399 KEYVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYVLATSSNGYD 527
           + + S+LK+NDP GF +VDVLAWG++GH V +++LAT++NGY+
Sbjct:  67 RRWWSMLKTNDPAGFTLVDVLAWGALGHAVGFFILATATNGYN 109

>sp|P14224|PSAG_CHLRE Photosystem I reaction center subunit V, chloroplastic
        OS=Chlamydomonas reinhardtii GN=PSAG PE=2 SV=1

          Length = 126

 Score =  72 bits (176), Expect = 2e-012
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 7/97 (7%)
 Frame = +3

Query: 234 VVKAELSPSVVISLSTGLSLFLGRFVFFNLQSENV---AKQVPEQNGKTHFEAGDDRAKE 404
           V KA L P +VIS ST   L +GRFVF   Q       +   P+  G T+F    D  ++
Sbjct:  27 VTKAALDPQIVISGSTAAFLAIGRFVFLGYQRREANFDSTVGPKTTGATYF----DDLQK 82

Query: 405 YVSLLKSNDPVGFNIVDVLAWGSIGHIVAYYVLATSS 515
             ++  +NDP GFNI+DV  WG++GH V + VLA +S
Sbjct:  83 NSTIFATNDPAGFNIIDVAGWGALGHAVGFAVLAINS 119

>sp|P20120|PSAG_PEA Photosystem I reaction center subunit V (Fragment) OS=Pisum
        sativum GN=PSAG PE=1 SV=1

          Length = 39

 Score =  64 bits (153), Expect = 1e-009
 Identities = 33/39 (84%), Positives = 36/39 (92%), Gaps = 1/39 (2%)
 Frame = +3

Query: 246 ELSPSVVISLSTGLSLFLGRFVFFNLQSENVAKQ-VPEQ 359
           EL+PS+VISLSTGLSLFLGRFVFFN Q ENVAKQ +PEQ
Sbjct:   1 ELNPSLVISLSTGLSLFLGRFVFFNFQRENVAKQGLPEQ 39

  Database: UniProt/SwissProt
    Posted date:  Sat Aug 07 14:36:18 2010
  Number of letters in database: 182,829,261
  Number of sequences in database:  518,415

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,788,331,444
Number of Sequences: 518415
Number of Extensions: 33788331444
Number of Successful Extensions: 244876492
Number of sequences better than 0.0: 0