BLASTX 7.6.2
Query= UN08419 /QuerySize=436
(435 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|7209506|dbj|BAA92248.1| pollen coat protein class A no. 1 [Br... 125 2e-027
gi|3395460|emb|CAA06464.1| pollen coat protein, class 'A', 1 (PC... 122 1e-026
gi|1653972|emb|CAA65766.1| pollen coat protein [Brassica olerace... 68 3e-010
gi|3062795|dbj|BAA25682.1| PCP-1 family [Brassica rapa] 58 3e-007
gi|1263100|emb|CAA65767.1| pollen coat protein [Brassica olerace... 58 3e-007
gi|7649936|dbj|BAA94096.1| SLR1 binding pollen coat protein [Bra... 57 4e-007
gi|7649804|dbj|BAA94095.1| SLR1 binding pollen coat protein [Bra... 57 6e-007
gi|15076829|gb|AAK82951.1|AF198612_1 pollen coat protein class A... 56 1e-006
>gi|7209506|dbj|BAA92248.1| pollen coat protein class A no. 1 [Brassica rapa]
Length = 81
Score = 125 bits (312), Expect = 2e-027
Identities = 60/82 (73%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQKRKLPCYSNKMG-TCEIKSCKAHCVQKHKKILI 206
MKN KLSLIGF MLT+LLFGETVIAQK K PCYS + TCE+K CKA+CV+KHKKIL
Sbjct: 1 MKNTVKLSLIGFFMLTVLLFGETVIAQKGK-PCYSEEPDKTCEVKRCKANCVKKHKKILA 59
Query: 207 GTMCITEKDGTTYCRCQYPCPP 272
T CI EK+G T+CRCQYPCPP
Sbjct: 60 FTTCIKEKNGNTFCRCQYPCPP 81
>gi|3395460|emb|CAA06464.1| pollen coat protein, class 'A', 1 (PCP-A1) [Brassica
oleracea var. alboglabra]
Length = 81
Score = 122 bits (306), Expect = 1e-026
Identities = 59/82 (71%), Positives = 65/82 (79%), Gaps = 2/82 (2%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQKRKLPCYSNKMG-TCEIKSCKAHCVQKHKKILI 206
MKN KLSLIGFVMLT+LL GETVIAQKRK PCYS + TCE+ CKA+CV+KHKKIL
Sbjct: 1 MKNTVKLSLIGFVMLTVLLLGETVIAQKRK-PCYSQEPDKTCEVNRCKANCVKKHKKILA 59
Query: 207 GTMCITEKDGTTYCRCQYPCPP 272
T CI E +G YCRCQYPCPP
Sbjct: 60 FTSCIKENNGNMYCRCQYPCPP 81
>gi|1653972|emb|CAA65766.1| pollen coat protein [Brassica oleracea var.
alboglabra]
Length = 84
Score = 68 bits (164), Expect = 3e-010
Identities = 41/86 (47%), Positives = 48/86 (55%), Gaps = 9/86 (10%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQKRK------LPCYSNKMGTCEIKSCKAHCVQKH 191
MK AFK LIGF ML I LFGET IAQ++K LP N+ GTC C+A CV++H
Sbjct: 1 MKVAFKPWLIGFFMLAIFLFGETAIAQEKKTDNQCNLPLI-NQSGTCAANQCQAACVKRH 59
Query: 192 KKILIGTMCITEKDGTTYCRCQYPCP 269
K + C T D C C Y CP
Sbjct: 60 KDGV--GKCTTNPDKKMRCICFYLCP 83
>gi|3062795|dbj|BAA25682.1| PCP-1 family [Brassica rapa]
Length = 83
Score = 58 bits (139), Expect = 3e-007
Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQK----RK--LPCYSNKMGTCEIKSCKAHCVQKH 191
MK ++ SLIGFVMLTILL G AQK RK + Y + G C I CKA C +
Sbjct: 1 MKIYYRSSLIGFVMLTILLLGVVANAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 192 KKILIGTMCITEKDGTTYCRCQYPC 266
K L CI G CRC Y C
Sbjct: 61 KGGL--ARCIDTGKGHMQCRCDYHC 83
>gi|1263100|emb|CAA65767.1| pollen coat protein [Brassica oleracea var.
alboglabra]
Length = 80
Score = 58 bits (138), Expect = 3e-007
Identities = 37/82 (45%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFG--ETVIAQKRKLPCYSNKMGTCEIKSCKAHCVQKHKKIL 203
MK AFK LIGF ML I LFG E + LP NK GTC C+A CV++HK +
Sbjct: 1 MKVAFKPWLIGFFMLAIFLFGFSEEKTDNQCNLPLI-NKSGTCAANQCQAACVKRHKDGV 59
Query: 204 IGTMCITEKDGTTYCRCQYPCP 269
C T D C C Y CP
Sbjct: 60 --GKCTTNPDKKMRCVCFYLCP 79
>gi|7649936|dbj|BAA94096.1| SLR1 binding pollen coat protein [Brassica juncea]
Length = 83
Score = 57 bits (137), Expect = 4e-007
Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQK----RK--LPCYSNKMGTCEIKSCKAHCVQKH 191
MK ++ SLIG VMLTILL G V AQK RK + Y + G C I CKA C +
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVVNAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 192 KKILIGTMCITEKDGTTYCRCQYPC 266
K L CI G CRC Y C
Sbjct: 61 KGGL--ARCIDTGKGHMQCRCDYHC 83
>gi|7649804|dbj|BAA94095.1| SLR1 binding pollen coat protein [Brassica napus]
Length = 83
Score = 57 bits (136), Expect = 6e-007
Identities = 38/85 (44%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQK----RK--LPCYSNKMGTCEIKSCKAHCVQKH 191
MK ++ SLIG VMLTILL G V AQK RK + Y + G C I CKA C +
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVVNAQKGGPVRKQCVEQYPDPNGKCVIGQCKAQCAKNR 60
Query: 192 KKILIGTMCITEKDGTTYCRCQYPC 266
K L CI G CRC Y C
Sbjct: 61 KGGL--ARCIDTGKGHMQCRCDYHC 83
>gi|15076829|gb|AAK82951.1|AF198612_1 pollen coat protein class A no. 2
precursor [Brassica napus]
Length = 83
Score = 56 bits (133), Expect = 1e-006
Identities = 37/85 (43%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Frame = +3
Query: 30 MKNAFKLSLIGFVMLTILLFGETVIAQK----RK--LPCYSNKMGTCEIKSCKAHCVQKH 191
MK ++ SLIG VMLTILL G AQK RK + Y + G C I CKA C +
Sbjct: 1 MKIYYRSSLIGLVMLTILLLGVVANAQKGGPVRKQCVEQYPDPNGKCVIDQCKAQCAKNR 60
Query: 192 KKILIGTMCITEKDGTTYCRCQYPC 266
K L CI G CRC Y C
Sbjct: 61 KGGL--ARCIDTGKGHMQCRCDYHC 83
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 964,703,055,540
Number of Sequences: 15229318
Number of Extensions: 964703055540
Number of Successful Extensions: 290412761
Number of sequences better than 0.0: 0
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