BLASTX 7.6.2
Query= UN08528 /QuerySize=888
(887 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297796859|ref|XP_002866314.1| DNA-directed RNA polymerase II ... 184 2e-044
gi|15237831|ref|NP_200726.1| DNA-directed RNA polymerase II subu... 181 1e-043
gi|1173137|sp|P46279.1|RPB7_SOYBN RecName: Full=DNA-directed RNA... 174 1e-041
gi|225434800|ref|XP_002282298.1| PREDICTED: hypothetical protein... 174 1e-041
gi|255558950|ref|XP_002520498.1| DNA-directed RNA polymerase II ... 174 1e-041
gi|217071674|gb|ACJ84197.1| unknown [Medicago truncatula] 174 2e-041
gi|226500588|ref|NP_001149597.1| DNA-directed RNA polymerase II ... 174 2e-041
gi|224056563|ref|XP_002298912.1| predicted protein [Populus tric... 174 2e-041
gi|326497319|dbj|BAK02244.1| predicted protein [Hordeum vulgare ... 174 2e-041
gi|326496519|dbj|BAJ94721.1| predicted protein [Hordeum vulgare ... 174 2e-041
gi|115463767|ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japo... 173 4e-041
gi|168056096|ref|XP_001780058.1| predicted protein [Physcomitrel... 163 4e-038
gi|302754896|ref|XP_002960872.1| hypothetical protein SELMODRAFT... 161 2e-037
>gi|297796859|ref|XP_002866314.1| DNA-directed RNA polymerase II [Arabidopsis
lyrata subsp. lyrata]
Length = 176
Score = 184 bits (465), Expect = 2e-044
Identities = 90/90 (100%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKECEVRLKIIGTRVDATEIFCVGTI
Sbjct: 133 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 162
Score = 145 bits (364), Expect = 1e-032
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIES+GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|15237831|ref|NP_200726.1| DNA-directed RNA polymerase II subunit RPB7
[Arabidopsis thaliana]
Length = 176
Score = 181 bits (459), Expect = 1e-043
Identities = 89/90 (98%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKECEVRLKIIGTRVDAT IFCVGTI
Sbjct: 133 SVKIQKECEVRLKIIGTRVDATAIFCVGTI 162
Score = 141 bits (355), Expect = 1e-031
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPRFFGRNL+ENLVSKLMKDVEGTCSGRHGFVVAITGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|1173137|sp|P46279.1|RPB7_SOYBN RecName: Full=DNA-directed RNA polymerase II
subunit RPB7; Short=RNA polymerase II subunit B7
Length = 176
Score = 174 bits (441), Expect = 1e-041
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
Score = 141 bits (354), Expect = 2e-031
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTCSGRHGFVVA+TGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|225434800|ref|XP_002282298.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 176
Score = 174 bits (441), Expect = 1e-041
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
Score = 136 bits (340), Expect = 8e-030
Identities = 64/71 (90%), Positives = 69/71 (97%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPR FGR+LR+NLV+KL+KDVEGTCSGRHGFVVAITGIE+VGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRHFGRHLRDNLVAKLVKDVEGTCSGRHGFVVAITGIENVGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|255558950|ref|XP_002520498.1| DNA-directed RNA polymerase II 19 kD
polypeptide rpb7, putative [Ricinus communis]
Length = 176
Score = 174 bits (441), Expect = 1e-041
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
Score = 144 bits (362), Expect = 2e-032
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPR+FGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|217071674|gb|ACJ84197.1| unknown [Medicago truncatula]
Length = 176
Score = 174 bits (440), Expect = 2e-041
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ GDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQTGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
Score = 140 bits (352), Expect = 3e-031
Identities = 64/71 (90%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTCSGRHGFVVA+TGIE++GKG+IR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGIIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|226500588|ref|NP_001149597.1| DNA-directed RNA polymerase II 19 kDa
polypeptide [Zea mays]
Length = 177
Score = 174 bits (440), Expect = 2e-041
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GD+PNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKE EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKESEVRLKIIGTRVDATEIFCIGTI 162
>gi|224056563|ref|XP_002298912.1| predicted protein [Populus trichocarpa]
Length = 176
Score = 174 bits (440), Expect = 2e-041
Identities = 84/90 (93%), Positives = 87/90 (96%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ GDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQTGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
Score = 143 bits (359), Expect = 5e-032
Identities = 67/71 (94%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPRFFGRNLREN+VSKLMKDVEGTCSGRHGFVVAITGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLRENIVSKLMKDVEGTCSGRHGFVVAITGIENIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>gi|326497319|dbj|BAK02244.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 177
Score = 174 bits (440), Expect = 2e-041
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GD+PNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKE EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKESEVRLKIIGTRVDATEIFCIGTI 162
>gi|326496519|dbj|BAJ94721.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 236
Score = 174 bits (440), Expect = 2e-041
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GD+PNYTTSDG
Sbjct: 132 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDG 191
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKE EVRLKIIGTRVDATEIFC+GTI
Sbjct: 192 SVKIQKESEVRLKIIGTRVDATEIFCIGTI 221
>gi|115463767|ref|NP_001055483.1| Os05g0400700 [Oryza sativa Japonica Group]
Length = 177
Score = 173 bits (437), Expect = 4e-041
Identities = 83/90 (92%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GD+PNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDVPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
>gi|168056096|ref|XP_001780058.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 177
Score = 163 bits (411), Expect = 4e-038
Identities = 77/90 (85%), Positives = 85/90 (94%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILE+VVT+VNKMGFFAEAGPVQIFVS HLIPDDM FQ+ D+PNY TSDG
Sbjct: 73 QCVVFRPFKGEILESVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMAFQSDDVPNYKTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SV+IQK+ EVRLKI+GTRVDATEIFC+GTI
Sbjct: 133 SVRIQKDSEVRLKIVGTRVDATEIFCIGTI 162
>gi|302754896|ref|XP_002960872.1| hypothetical protein SELMODRAFT_75793
[Selaginella moellendorffii]
Length = 177
Score = 161 bits (405), Expect = 2e-037
Identities = 77/90 (85%), Positives = 83/90 (92%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILE VVTLVNKMGFFAEAGPVQIFVS HLIPDDM FQ+GD+P Y TSD
Sbjct: 73 QCVVFRPFKGEILEGVVTLVNKMGFFAEAGPVQIFVSNHLIPDDMSFQSGDVPCYETSDS 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SV+IQK+ EVRLKI+GTRVDATEIFC+GTI
Sbjct: 133 SVRIQKDSEVRLKIVGTRVDATEIFCIGTI 162
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,053,028,657,214
Number of Sequences: 15229318
Number of Extensions: 1053028657214
Number of Successful Extensions: 300909508
Number of sequences better than 0.0: 0
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