BLASTX 7.6.2
Query= UN08528 /QuerySize=888
(887 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P38421|RPB7_ARATH DNA-directed RNA polymerase II subunit RPB7... 181 5e-045
sp|P46279|RPB7_SOYBN DNA-directed RNA polymerase II subunit RPB7... 174 7e-043
sp|Q54P04|RPB7_DICDI DNA-directed RNA polymerase II subunit rpb7... 110 2e-023
sp|Q5E9B8|RPB7_BOVIN DNA-directed RNA polymerase II subunit RPB7... 103 2e-021
sp|Q7ZW41|RPB7_DANRE DNA-directed RNA polymerase II subunit RPB7... 103 2e-021
sp|P62487|RPB7_HUMAN DNA-directed RNA polymerase II subunit RPB7... 103 2e-021
sp|P62488|RPB7_MOUSE DNA-directed RNA polymerase II subunit RPB7... 103 2e-021
sp|P62489|RPB7_RAT DNA-directed RNA polymerase II subunit RPB7 O... 103 2e-021
sp|O14459|RPB7_SCHPO DNA-directed RNA polymerase II subunit rpb7... 102 4e-021
sp|P34087|RPB7_YEAST DNA-directed RNA polymerase II subunit RPB7... 71 8e-012
>sp|P38421|RPB7_ARATH DNA-directed RNA polymerase II subunit RPB7 OS=Arabidopsis
thaliana GN=RPB19 PE=1 SV=1
Length = 176
Score = 181 bits (459), Expect = 5e-045
Identities = 89/90 (98%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKECEVRLKIIGTRVDAT IFCVGTI
Sbjct: 133 SVKIQKECEVRLKIIGTRVDATAIFCVGTI 162
Score = 141 bits (355), Expect = 6e-033
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPRFFGRNL+ENLVSKLMKDVEGTCSGRHGFVVAITGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>sp|P46279|RPB7_SOYBN DNA-directed RNA polymerase II subunit RPB7 OS=Glycine max
PE=2 SV=1
Length = 176
Score = 174 bits (441), Expect = 7e-043
Identities = 84/90 (93%), Positives = 88/90 (97%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVT+VNKMGFFAEAGPVQIFVS HLIPDDMEFQ+GDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQSGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQK+ EVRLKIIGTRVDATEIFC+GTI
Sbjct: 133 SVKIQKDSEVRLKIIGTRVDATEIFCIGTI 162
Score = 141 bits (354), Expect = 8e-033
Identities = 65/71 (91%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPR+FGRNLR+NLVSKLMKDVEGTCSGRHGFVVA+TGIE++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRYFGRNLRDNLVSKLMKDVEGTCSGRHGFVVAVTGIENIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
>sp|Q54P04|RPB7_DICDI DNA-directed RNA polymerase II subunit rpb7
OS=Dictyostelium discoideum GN=polr2g PE=3 SV=1
Length = 172
Score = 110 bits (274), Expect = 2e-023
Identities = 54/91 (59%), Positives = 70/91 (76%), Gaps = 1/91 (1%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQA-GDMPNYTTSD 493
+ ++F+PFKGE+L+A+VT V +GFFAEAGP+ IFVS LIP DM F A +P + + D
Sbjct: 73 KAIIFKPFKGEVLDAIVTKVTNLGFFAEAGPLSIFVSTQLIPSDMIFDAQSAVPCFVSED 132
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
GS KI K+ EVRL+I GTRVDATEIF +G+I
Sbjct: 133 GSSKISKDDEVRLQIKGTRVDATEIFAIGSI 163
Score = 74 bits (180), Expect = 1e-012
Identities = 30/75 (40%), Positives = 50/75 (66%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFH+ LE+++ +HP+ G NL +L +VEGTC+GR+GF++ IT ++ + KG +
Sbjct: 1 MFFHLTLEKDLHMHPKHCGPNLFTIATQQLYSEVEGTCTGRYGFIITITSVDFLSKGKVL 60
Query: 282 DGTAFVTFPVKCSAL 326
+ + +V F VK A+
Sbjct: 61 ESSGYVVFNVKYKAI 75
>sp|Q5E9B8|RPB7_BOVIN DNA-directed RNA polymerase II subunit RPB7 OS=Bos taurus
GN=POLR2G PE=2 SV=1
Length = 172
Score = 103 bits (256), Expect = 2e-021
Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQA-GDMPNYTTSD 493
+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF + P Y T D
Sbjct: 73 KAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMD 132
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
+ IQ++ E+RLKI+GTRVD +IF +G++
Sbjct: 133 EDIVIQQDDEIRLKIVGTRVDKNDIFAIGSL 163
Score = 89 bits (218), Expect = 5e-017
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 282 DGTAFVTFPVKCSAL 326
G FV +PVK A+
Sbjct: 61 PGRGFVLYPVKYKAI 75
>sp|Q7ZW41|RPB7_DANRE DNA-directed RNA polymerase II subunit RPB7 OS=Danio rerio
GN=polr2g PE=2 SV=1
Length = 172
Score = 103 bits (256), Expect = 2e-021
Identities = 48/91 (52%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQA-GDMPNYTTSD 493
+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF + P Y T D
Sbjct: 73 KAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTVD 132
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
V IQ++ E+RLKI+GTRVD +IF +G++
Sbjct: 133 EDVVIQQDDEIRLKIVGTRVDKNDIFAIGSL 163
Score = 89 bits (218), Expect = 5e-017
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 282 DGTAFVTFPVKCSAL 326
G FV +PVK A+
Sbjct: 61 PGRGFVLYPVKYKAI 75
>sp|P62487|RPB7_HUMAN DNA-directed RNA polymerase II subunit RPB7 OS=Homo
sapiens GN=POLR2G PE=1 SV=1
Length = 172
Score = 103 bits (256), Expect = 2e-021
Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQA-GDMPNYTTSD 493
+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF + P Y T D
Sbjct: 73 KAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMD 132
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
+ IQ++ E+RLKI+GTRVD +IF +G++
Sbjct: 133 EDIVIQQDDEIRLKIVGTRVDKNDIFAIGSL 163
Score = 89 bits (218), Expect = 5e-017
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 282 DGTAFVTFPVKCSAL 326
G FV +PVK A+
Sbjct: 61 PGRGFVLYPVKYKAI 75
>sp|P62488|RPB7_MOUSE DNA-directed RNA polymerase II subunit RPB7 OS=Mus
musculus GN=Polr2g PE=2 SV=1
Length = 172
Score = 103 bits (256), Expect = 2e-021
Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQA-GDMPNYTTSD 493
+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF + P Y T D
Sbjct: 73 KAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMD 132
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
+ IQ++ E+RLKI+GTRVD +IF +G++
Sbjct: 133 EDIVIQQDDEIRLKIVGTRVDKNDIFAIGSL 163
Score = 89 bits (218), Expect = 5e-017
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 282 DGTAFVTFPVKCSAL 326
G FV +PVK A+
Sbjct: 61 PGRGFVLYPVKYKAI 75
>sp|P62489|RPB7_RAT DNA-directed RNA polymerase II subunit RPB7 OS=Rattus
norvegicus GN=Polr2g PE=2 SV=1
Length = 172
Score = 103 bits (256), Expect = 2e-021
Identities = 47/91 (51%), Positives = 67/91 (73%), Gaps = 1/91 (1%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQA-GDMPNYTTSD 493
+ +VFRPFKGE+++AVVT VNK+G F E GP+ F+S+H IP +MEF + P Y T D
Sbjct: 73 KAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPMSCFISRHSIPSEMEFDPNSNPPCYKTMD 132
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
+ IQ++ E+RLKI+GTRVD +IF +G++
Sbjct: 133 EDIVIQQDDEIRLKIVGTRVDKNDIFAIGSL 163
Score = 89 bits (218), Expect = 5e-017
Identities = 38/75 (50%), Positives = 55/75 (73%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MF+HI LE + LHPR+FG NL + KL +VEGTC+G++GFV+A+T I+++G G+I+
Sbjct: 1 MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGVIQ 60
Query: 282 DGTAFVTFPVKCSAL 326
G FV +PVK A+
Sbjct: 61 PGRGFVLYPVKYKAI 75
>sp|O14459|RPB7_SCHPO DNA-directed RNA polymerase II subunit rpb7
OS=Schizosaccharomyces pombe GN=rpb7 PE=1 SV=1
Length = 172
Score = 102 bits (253), Expect = 4e-021
Identities = 49/91 (53%), Positives = 67/91 (73%), Gaps = 3/91 (3%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQ-AGDMPNYTTSD 493
+ V++RPF+GE+++A+VT VNKMGFFA GP+ +FVS HL+P DM+F + PNY+ D
Sbjct: 76 RAVLWRPFRGEVVDAIVTTVNKMGFFANIGPLNVFVSSHLVPPDMKFDPTANPPNYSGED 135
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
I+K VRLKI+GTR DATEIF + T+
Sbjct: 136 --QVIEKGSNVRLKIVGTRTDATEIFAIATM 164
Score = 59 bits (140), Expect = 5e-008
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Frame = +3
Query: 105 FFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAI--TGIESVGKGLI 278
FF L + LHP +FG +++ L +KL+ DVEGTCSG++G+++ + + + KG +
Sbjct: 3 FFLKELSLTISLHPSYFGPRMQDYLKAKLLADVEGTCSGQYGYIICVLDSNTIDIDKGRV 62
Query: 279 RDGTAFVTFPVKCSAL 326
G F F VK A+
Sbjct: 63 VPGQGFAEFEVKYRAV 78
>sp|P34087|RPB7_YEAST DNA-directed RNA polymerase II subunit RPB7
OS=Saccharomyces cerevisiae GN=RPB7 PE=1 SV=1
Length = 171
Score = 71 bits (173), Expect = 8e-012
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAG-DMPNYTTSD 493
+ VVF+PFKGE+++ V ++ GF + GP+++FV+KHL+P D+ F AG + P+Y +S+
Sbjct: 75 RAVVFKPFKGEVVDGTVVSCSQHGFEVQVGPMKVFVTKHLMPQDLTFNAGSNPPSYQSSE 134
Query: 494 GSVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
+ I+ +R+KI G + I +G+I
Sbjct: 135 DVITIKS--RIRVKIEGCISQVSSIHAIGSI 163
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,801,685,782
Number of Sequences: 518415
Number of Extensions: 36801685782
Number of Successful Extensions: 258262551
Number of sequences better than 0.0: 0
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