BLASTX 7.6.2
Query= UN08528 /QuerySize=888
(887 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G59180.1 | Symbols: NRPB7 | NRPB7; DNA-directe... 181 5e-046
>TAIR9_protein||AT5G59180.1 | Symbols: NRPB7 | NRPB7; DNA-directed RNA
polymerase/ RNA binding | chr5:23883499-23884976 FORWARD
Length = 177
Score = 181 bits (459), Expect = 5e-046
Identities = 89/90 (98%)
Frame = +2
Query: 317 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 496
QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG
Sbjct: 73 QCVVFRPFKGEILEAVVTLVNKMGFFAEAGPVQIFVSKHLIPDDMEFQAGDMPNYTTSDG 132
Query: 497 SVKIQKECEVRLKIIGTRVDATEIFCVGTI 586
SVKIQKECEVRLKIIGTRVDAT IFCVGTI
Sbjct: 133 SVKIQKECEVRLKIIGTRVDATAIFCVGTI 162
Score = 141 bits (355), Expect = 6e-034
Identities = 66/71 (92%), Positives = 70/71 (98%)
Frame = +3
Query: 102 MFFHIVLERNMQLHPRFFGRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIESVGKGLIR 281
MFFHIVLERNMQLHPRFFGRNL+ENLVSKLMKDVEGTCSGRHGFVVAITGI+++GKGLIR
Sbjct: 1 MFFHIVLERNMQLHPRFFGRNLKENLVSKLMKDVEGTCSGRHGFVVAITGIDTIGKGLIR 60
Query: 282 DGTAFVTFPVK 314
DGT FVTFPVK
Sbjct: 61 DGTGFVTFPVK 71
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,849,746,719
Number of Sequences: 33410
Number of Extensions: 4849746719
Number of Successful Extensions: 179095343
Number of sequences better than 0.0: 0
|