BLASTX 7.6.2
Query= UN08564 /QuerySize=915
(914 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15235242|ref|NP_194556.1| E3 ubiquitin-protein ligase RMA2 [A... 326 4e-087
gi|297799146|ref|XP_002867457.1| zinc finger family protein [Ara... 323 3e-086
gi|225446337|ref|XP_002272136.1| PREDICTED: similar to ring doma... 121 3e-025
gi|255638201|gb|ACU19414.1| unknown [Glycine max] 119 6e-025
gi|255635730|gb|ACU18214.1| unknown [Glycine max] 117 2e-024
gi|224127182|ref|XP_002329420.1| predicted protein [Populus tric... 114 2e-023
gi|224121892|ref|XP_002330679.1| predicted protein [Populus tric... 112 7e-023
gi|255553769|ref|XP_002517925.1| rnf5, putative [Ricinus communis] 111 3e-022
gi|75291821|sp|Q6R567.1|RMA1_CAPAN RecName: Full=E3 ubiquitin-pr... 110 4e-022
gi|30687607|ref|NP_194477.2| E3 ubiquitin-protein ligase RMA3 [A... 108 2e-021
gi|4972072|emb|CAB43879.1| putative RING zinc finger protein [Ar... 108 2e-021
gi|297803354|ref|XP_002869561.1| zinc finger family protein [Ara... 106 9e-021
gi|225461411|ref|XP_002282248.1| PREDICTED: hypothetical protein... 104 2e-020
gi|302143025|emb|CBI20320.3| unnamed protein product [Vitis vini... 104 2e-020
gi|224136590|ref|XP_002326898.1| predicted protein [Populus tric... 103 6e-020
gi|224096906|ref|XP_002310781.1| predicted protein [Populus tric... 102 1e-019
gi|168042258|ref|XP_001773606.1| predicted protein [Physcomitrel... 80 3e-013
gi|297825287|ref|XP_002880526.1| zinc finger family protein [Ara... 78 2e-012
gi|21553849|gb|AAM62942.1| putative RING zinc finger protein [Ar... 77 3e-012
gi|15224062|ref|NP_179958.1| ubiquitin-protein ligase RNF5 [Arab... 75 1e-011
>gi|15235242|ref|NP_194556.1| E3 ubiquitin-protein ligase RMA2 [Arabidopsis
thaliana]
Length = 193
Score = 326 bits (834), Expect = 4e-087
Identities = 155/193 (80%), Positives = 169/193 (87%), Gaps = 2/193 (1%)
Frame = -1
Query: 713 EIHNQEDNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVD 534
EI ED+ L DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCI+KWT ++NNSRQRVD
Sbjct: 2 EIEKDEDD-TTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVD 60
Query: 533 QYDNMKESTKCPVCKSDVSDATLVPIYGRGQKVPQSGSNVPTRPSGPVYDLRRVGQRAGQ 354
QYD+ +E KCPVCKSDVS+ATLVPIYGRGQK PQSGSNVP+RP+GPVYDLR VGQR G+
Sbjct: 61 QYDHKREPPKCPVCKSDVSEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGE 120
Query: 353 GESERYMYRMPDPVVGVVCEMVYRRLFGESSSNVTPYRSDRYTS-RRTMQADESLSRVYL 177
GES+RYMYRMPDPV+GVVCEMVYRRLFGESSSN+ PYR S RR MQA+ESLSRVYL
Sbjct: 121 GESQRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYRDMNVRSRRRAMQAEESLSRVYL 180
Query: 176 FLLCFMVMCLILF 138
FLLCFM MCL LF
Sbjct: 181 FLLCFMFMCLFLF 193
>gi|297799146|ref|XP_002867457.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 193
Score = 323 bits (827), Expect = 3e-086
Identities = 154/193 (79%), Positives = 168/193 (87%), Gaps = 2/193 (1%)
Frame = -1
Query: 713 EIHNQEDNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVD 534
EI N E N L DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCI+KWT ++NNSRQRVD
Sbjct: 2 EIENDE-NDTTLVDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVD 60
Query: 533 QYDNMKESTKCPVCKSDVSDATLVPIYGRGQKVPQSGSNVPTRPSGPVYDLRRVGQRAGQ 354
QYD+ +E KCPVCKSDVS+ATLVPIYGRGQK PQSGS VP+RPSGPVYDLR V QR G+
Sbjct: 61 QYDSKREPPKCPVCKSDVSEATLVPIYGRGQKTPQSGSTVPSRPSGPVYDLRGVSQRLGE 120
Query: 353 GESERYMYRMPDPVVGVVCEMVYRRLFGESSSNVTPYRSDRYTS-RRTMQADESLSRVYL 177
G+S+RYMYRMPDPV+GVVCEMVYRRLFGESSSN+ PYR S RR MQA+ESLSRVYL
Sbjct: 121 GQSQRYMYRMPDPVMGVVCEMVYRRLFGESSSNMAPYRDTNVRSRRRAMQAEESLSRVYL 180
Query: 176 FLLCFMVMCLILF 138
FLLCFM MCL+LF
Sbjct: 181 FLLCFMFMCLLLF 193
>gi|225446337|ref|XP_002272136.1| PREDICTED: similar to ring domain containing
protein isoform 2 [Vitis vinifera]
Length = 260
Score = 121 bits (301), Expect = 3e-025
Identities = 57/101 (56%), Positives = 68/101 (67%), Gaps = 12/101 (11%)
Frame = -1
Query: 674 DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCPV 495
+S G FDCNICLD V+DPVVTLCGHLFCWPCIYKW + S + DQ + +CPV
Sbjct: 38 NSYGGFDCNICLDFVQDPVVTLCGHLFCWPCIYKWLHFQSISTENPDQ-----KHPQCPV 92
Query: 494 CKSDVSDATLVPIYGRGQ-------KVPQSGSNVPTRPSGP 393
CK++VSD TL+P+YGRGQ K P +P RPSGP
Sbjct: 93 CKAEVSDTTLIPLYGRGQATKPSNAKAPHPDIFIPRRPSGP 133
>gi|255638201|gb|ACU19414.1| unknown [Glycine max]
Length = 236
Score = 119 bits (298), Expect = 6e-025
Identities = 64/133 (48%), Positives = 82/133 (61%), Gaps = 25/133 (18%)
Frame = -1
Query: 704 NQEDNLAALGDSG----GDFDCNICLDQVRDPVVTLCGHLFCWPCIYKW----TTSTNNS 549
N + + + DSG G FDCNICL+ V+DPVVTLCGHL+CWPCIYKW +TS +N
Sbjct: 15 NWKSSSEIIADSGRNASGSFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQSTSLDNE 74
Query: 548 RQRVDQYDNMKESTKCPVCKSDVSDATLVPIYGRGQ-------KVPQSGSNVPTRPSGP- 393
Q+ Q CPVCKS+VS ++LVP+YGRGQ K Q G+ +P RP GP
Sbjct: 75 EQQKPQ---------CPVCKSEVSQSSLVPLYGRGQTTIPSKGKPHQVGTVIPQRPHGPR 125
Query: 392 VYDLRRVGQRAGQ 354
+++R V Q Q
Sbjct: 126 THNIRSVSQPISQ 138
>gi|255635730|gb|ACU18214.1| unknown [Glycine max]
Length = 240
Score = 117 bits (293), Expect = 2e-024
Identities = 58/115 (50%), Positives = 74/115 (64%), Gaps = 13/115 (11%)
Frame = -1
Query: 674 DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCPV 495
++ GDFDCNICL+ V+DPVVTLCGHL+CWPCIYKW + S D ++ +CPV
Sbjct: 29 NASGDFDCNICLECVQDPVVTLCGHLYCWPCIYKWLHFQSTSLD-----DEEQQRPQCPV 83
Query: 494 CKSDVSDATLVPIYGRGQ-------KVPQSGSNVPTRPSGP-VYDLRRVGQRAGQ 354
CKS+VS ++LVP+YGRGQ K Q G+ +P RP GP + R V Q Q
Sbjct: 84 CKSEVSQSSLVPLYGRGQTTLPSKGKPRQVGTVIPQRPHGPRTLNTRSVSQPISQ 138
>gi|224127182|ref|XP_002329420.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 114 bits (284), Expect = 2e-023
Identities = 52/95 (54%), Positives = 65/95 (68%), Gaps = 11/95 (11%)
Frame = -1
Query: 659 FDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCPVCKSDV 480
FDCNICLD V+DPVVTLCGHL+CWPCIYKW S + S + DQ + +CPVCK++V
Sbjct: 45 FDCNICLDSVQDPVVTLCGHLYCWPCIYKWLHSQSISAENQDQ----QPQQQCPVCKAEV 100
Query: 479 SDATLVPIYGRGQ-------KVPQSGSNVPTRPSG 396
S +T+VP++GRGQ K P G +P RP G
Sbjct: 101 SQSTIVPLFGRGQTTKPSMRKAPNVGIIIPHRPPG 135
>gi|224121892|ref|XP_002330679.1| predicted protein [Populus trichocarpa]
Length = 263
Score = 112 bits (280), Expect = 7e-023
Identities = 51/95 (53%), Positives = 63/95 (66%), Gaps = 11/95 (11%)
Frame = -1
Query: 659 FDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCPVCKSDV 480
FDCNICLD V DPVVTLCGHL+CWPCIYKW + S + DQ+ +CPVCK++V
Sbjct: 45 FDCNICLDSVHDPVVTLCGHLYCWPCIYKWLHFQSISAENQDQHPQQ----QCPVCKAEV 100
Query: 479 SDATLVPIYGRGQ-------KVPQSGSNVPTRPSG 396
S +T+VP++GRGQ K P G +P RP G
Sbjct: 101 SQSTIVPLFGRGQTTKPCKGKAPNLGIIIPRRPPG 135
>gi|255553769|ref|XP_002517925.1| rnf5, putative [Ricinus communis]
Length = 225
Score = 111 bits (275), Expect = 3e-022
Identities = 51/95 (53%), Positives = 64/95 (67%), Gaps = 11/95 (11%)
Frame = -1
Query: 659 FDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCPVCKSDV 480
FDCNICLD V+DPVVTLCGHL+CWPCIYKW + S + D ++ +CPVCK++V
Sbjct: 48 FDCNICLDPVQDPVVTLCGHLYCWPCIYKWLHFQSISTENED----LQLHQQCPVCKAEV 103
Query: 479 SDATLVPIYGRGQ-------KVPQSGSNVPTRPSG 396
S+ TLVP++GRGQ K P G +P RP G
Sbjct: 104 SEGTLVPLFGRGQTTKPSKSKAPNLGIIIPRRPRG 138
>gi|75291821|sp|Q6R567.1|RMA1_CAPAN RecName: Full=E3 ubiquitin-protein ligase
RMA1H1; AltName: Full=Protein RING membrane-anchor 1 homolog 1
Length = 252
Score = 110 bits (274), Expect = 4e-022
Identities = 50/99 (50%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Frame = -1
Query: 665 GDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCPVCKS 486
G FDCNICLD V +PV+TLCGHL+CWPCIYKW + S + DQ + +CPVCK+
Sbjct: 37 GGFDCNICLDCVHEPVITLCGHLYCWPCIYKWIYFQSVSSENSDQ-----QQPQCPVCKA 91
Query: 485 DVSDATLVPIYGRG--------QKVPQSGSNVPTRPSGP 393
+VS+ TL+P+YGRG K P G +P RP P
Sbjct: 92 EVSEKTLIPLYGRGGQSTKPSEGKAPNLGIVIPQRPPSP 130
>gi|30687607|ref|NP_194477.2| E3 ubiquitin-protein ligase RMA3 [Arabidopsis
thaliana]
Length = 243
Score = 108 bits (268), Expect = 2e-021
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Frame = -1
Query: 737 DNLFNDKMEIHNQEDNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTST 558
DN F K + + A + G FDCNICLD DPVVTLCGHLFCWPCIYKW
Sbjct: 16 DNGFIAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKW-LHV 74
Query: 557 NNSRQRVDQYDNMKESTKCPVCKSDVSDATLVPIYGRGQKVPQS----------GSNVPT 408
S VDQ+ N CPVCKS+++ +LVP+YGRG P S +++P
Sbjct: 75 QLSSVSVDQHQN-----NCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPR 129
Query: 407 RPS 399
RP+
Sbjct: 130 RPA 132
>gi|4972072|emb|CAB43879.1| putative RING zinc finger protein [Arabidopsis
thaliana]
Length = 264
Score = 108 bits (268), Expect = 2e-021
Identities = 56/123 (45%), Positives = 69/123 (56%), Gaps = 16/123 (13%)
Frame = -1
Query: 737 DNLFNDKMEIHNQEDNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTST 558
DN F K + + A + G FDCNICLD DPVVTLCGHLFCWPCIYKW
Sbjct: 28 DNGFIAKQKPNLTTAPTAGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKW-LHV 86
Query: 557 NNSRQRVDQYDNMKESTKCPVCKSDVSDATLVPIYGRGQKVPQS----------GSNVPT 408
S VDQ+ N CPVCKS+++ +LVP+YGRG P S +++P
Sbjct: 87 QLSSVSVDQHQN-----NCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDALSTDIPR 141
Query: 407 RPS 399
RP+
Sbjct: 142 RPA 144
>gi|297803354|ref|XP_002869561.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 243
Score = 106 bits (262), Expect = 9e-021
Identities = 56/124 (45%), Positives = 69/124 (55%), Gaps = 21/124 (16%)
Frame = -1
Query: 725 NDKMEIHNQEDNLAALGDSG-----GDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTS 561
+D I Q+ NL G G FDCNICLD DPVVTLCGHLFCWPCIYKW
Sbjct: 15 HDNGFIVKQKPNLITAPTGGQANESGCFDCNICLDTAHDPVVTLCGHLFCWPCIYKW-LH 73
Query: 560 TNNSRQRVDQYDNMKESTKCPVCKSDVSDATLVPIYGRGQKVPQS----------GSNVP 411
S +DQ+ N CPVCKS+++ +LVP+YGRG P S +++P
Sbjct: 74 VQLSSVSIDQHHN-----NCPVCKSNITITSLVPLYGRGMSSPSSTFGSKKQDAQSTDIP 128
Query: 410 TRPS 399
RP+
Sbjct: 129 RRPA 132
>gi|225461411|ref|XP_002282248.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 253
Score = 104 bits (259), Expect = 2e-020
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Frame = -1
Query: 686 AALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKEST 507
AA +S G FDCNICLD DPVVTLCGHL+CWPCIYKW + S Q +
Sbjct: 34 AASENSNGSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQSTSPVTEQQQN------ 87
Query: 506 KCPVCKSDVSDATLVPIYGRGQKVPQS-------GSNVPTRP 402
CPVCK+++S +LVP+YGRG +S G +P RP
Sbjct: 88 -CPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPRRP 128
>gi|302143025|emb|CBI20320.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 104 bits (259), Expect = 2e-020
Identities = 50/102 (49%), Positives = 61/102 (59%), Gaps = 14/102 (13%)
Frame = -1
Query: 686 AALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKEST 507
AA +S G FDCNICLD DPVVTLCGHL+CWPCIYKW + S Q +
Sbjct: 134 AASENSNGSFDCNICLDSAHDPVVTLCGHLYCWPCIYKWLHVQSTSPVTEQQQN------ 187
Query: 506 KCPVCKSDVSDATLVPIYGRGQKVPQS-------GSNVPTRP 402
CPVCK+++S +LVP+YGRG +S G +P RP
Sbjct: 188 -CPVCKANISHTSLVPLYGRGPSPSESETKKLHVGPAIPRRP 228
>gi|224136590|ref|XP_002326898.1| predicted protein [Populus trichocarpa]
Length = 228
Score = 103 bits (255), Expect = 6e-020
Identities = 50/100 (50%), Positives = 64/100 (64%), Gaps = 20/100 (20%)
Frame = -1
Query: 677 GDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCP 498
GD+ GDF+CNIC D +DP+VTLCGHLFCWPC+YKW + SR+ CP
Sbjct: 25 GDA-GDFECNICFDLAQDPIVTLCGHLFCWPCLYKWLHFHSKSRE-------------CP 70
Query: 497 VCKSDVSDATLVPIYGRGQKV--PQS----GSNVPTRPSG 396
VCK+ V + LVP+YGRG+ P+S G N+P RP+G
Sbjct: 71 VCKALVEEEKLVPLYGRGKTSTDPRSKSIPGVNIPNRPAG 110
>gi|224096906|ref|XP_002310781.1| predicted protein [Populus trichocarpa]
Length = 230
Score = 102 bits (253), Expect = 1e-019
Identities = 46/100 (46%), Positives = 64/100 (64%), Gaps = 19/100 (19%)
Frame = -1
Query: 677 GDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQRVDQYDNMKESTKCP 498
G+ GDF+CNIC + RDP+VTLCGHL+CWPC+Y+W ++S + CP
Sbjct: 23 GNDAGDFECNICFELARDPIVTLCGHLYCWPCLYQWLHLHSHSHE-------------CP 69
Query: 497 VCKSDVSDATLVPIYGRG--QKVPQS----GSNVPTRPSG 396
VCK+ + + LVP+YGRG Q P+S G ++P+RPSG
Sbjct: 70 VCKAIIQEEKLVPLYGRGNSQSDPRSKSYPGIDIPSRPSG 109
>gi|168042258|ref|XP_001773606.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 234
Score = 80 bits (197), Expect = 3e-013
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Frame = -1
Query: 722 DKMEIHNQEDNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQ 543
D + +E + A D GG FDCNICL+ +DPVVTLCGHLFCWPC+Y+W + ++
Sbjct: 17 DPHPVGGEETSAAGSSDQGGSFDCNICLELAQDPVVTLCGHLFCWPCLYRWLQMHSICQE 76
Query: 542 RVDQYDNMKESTKCPVCKSDVSDATLVPIYGRGQKVPQSGSNVPTRPSG 396
+++E P+ + + R + VP G N+P RP G
Sbjct: 77 CPVCKGSVEEDKVIPL----YGRGKVNCVDPRTKAVP--GLNIPHRPVG 119
>gi|297825287|ref|XP_002880526.1| zinc finger family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 226
Score = 78 bits (190), Expect = 2e-012
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = -1
Query: 695 DNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQ 543
DN D GGDF+CNIC + +DP+VTLCGHLFCWPC+Y+W ++S++
Sbjct: 14 DNNNGANDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQE 64
>gi|21553849|gb|AAM62942.1| putative RING zinc finger protein [Arabidopsis
thaliana]
Length = 227
Score = 77 bits (188), Expect = 3e-012
Identities = 28/51 (54%), Positives = 38/51 (74%)
Frame = -1
Query: 695 DNLAALGDSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQ 543
DN D GGDF+CNIC + +DP+VTLCGHLFCWPC+Y+W ++S++
Sbjct: 14 DNNNDTNDQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQE 64
>gi|15224062|ref|NP_179958.1| ubiquitin-protein ligase RNF5 [Arabidopsis
thaliana]
Length = 227
Score = 75 bits (184), Expect = 1e-011
Identities = 26/44 (59%), Positives = 36/44 (81%)
Frame = -1
Query: 674 DSGGDFDCNICLDQVRDPVVTLCGHLFCWPCIYKWTTSTNNSRQ 543
D GGDF+CNIC + +DP+VTLCGHLFCWPC+Y+W ++S++
Sbjct: 21 DQGGDFECNICFELAQDPIVTLCGHLFCWPCLYRWLHHHSHSQE 64
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,053,028,657,214
Number of Sequences: 15229318
Number of Extensions: 1053028657214
Number of Successful Extensions: 300909508
Number of sequences better than 0.0: 0
|
