BLASTX 7.6.2
Query= UN08687 /QuerySize=1043
(1042 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G61170.1 | Symbols: | 40S ribosomal protein S... 230 1e-060
TAIR9_protein||AT3G02080.1 | Symbols: | 40S ribosomal protein S... 226 2e-059
TAIR9_protein||AT5G15520.1 | Symbols: | 40S ribosomal protein S... 225 6e-059
TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular... 114 9e-026
>TAIR9_protein||AT5G61170.1 | Symbols: | 40S ribosomal protein S19 (RPS19C) |
chr5:24611158-24612202 FORWARD
Length = 144
Score = 230 bits (585), Expect = 1e-060
Identities = 111/113 (98%), Positives = 112/113 (99%)
Frame = +3
Query: 492 LELPAWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS 671
+ELP WTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS
Sbjct: 29 IELPLWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS 88
Query: 672 RPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAA 830
RPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAA
Sbjct: 89 RPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAA 141
>TAIR9_protein||AT3G02080.1 | Symbols: | 40S ribosomal protein S19 (RPS19A) |
chr3:364138-365161 REVERSE
Length = 144
Score = 226 bits (576), Expect = 2e-059
Identities = 107/114 (93%), Positives = 112/114 (98%)
Frame = +3
Query: 492 LELPAWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS 671
+ELP WTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS
Sbjct: 29 IELPTWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS 88
Query: 672 RPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAAE 833
RPPHFCKSSGG+ARHILQQL+TMNIV+LDTKGGR+ITSSGQRDLDQVAGRIA E
Sbjct: 89 RPPHFCKSSGGIARHILQQLETMNIVELDTKGGRRITSSGQRDLDQVAGRIAVE 142
>TAIR9_protein||AT5G15520.1 | Symbols: | 40S ribosomal protein S19 (RPS19B) |
chr5:5037242-5038136 REVERSE
Length = 144
Score = 225 bits (571), Expect = 6e-059
Identities = 105/115 (91%), Positives = 114/115 (99%)
Frame = +3
Query: 492 LELPAWTDIVKTGKLKELAPYDPDWYYIRAASMARKVYLRGGLGVGAFRRIYGGSKRNGS 671
+ELP WTDIVKTG+LKELAPYDPDWYYIRAASMARK+YLRGGLGVGAFRRIYGGSKRNGS
Sbjct: 29 IELPLWTDIVKTGRLKELAPYDPDWYYIRAASMARKIYLRGGLGVGAFRRIYGGSKRNGS 88
Query: 672 RPPHFCKSSGGVARHILQQLQTMNIVDLDTKGGRKITSSGQRDLDQVAGRIAAEA 836
RPPHFCKSSGG+ARHILQQL+TM+IV+LDTKGGR+ITSSGQRDLDQVAGRIAAE+
Sbjct: 89 RPPHFCKSSGGIARHILQQLETMSIVELDTKGGRRITSSGQRDLDQVAGRIAAES 143
>TAIR9_protein||AT4G19390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved
protein UCP022348 (InterPro:IPR016804), Uncharacterised protein family
UPF0114 (InterPro:IPR005134); BEST Arabidopsis thaliana protein match
is: unknown protein (TAIR:AT5G13720.1); Has 553 Blast hits to 553
proteins in 219 species: Archae - 18; Bacteria - 407; Metazoa - 0;
Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 74 (source:
NCBI BLink). | chr4:10574903-10576355 REVERSE
Length = 274
Score = 114 bits (285), Expect = 9e-026
Identities = 68/113 (60%), Positives = 81/113 (71%), Gaps = 12/113 (10%)
Frame = +1
Query: 76 SSPCRTINANNAVTAPPSPSGMIFHGCRDSVPIDKRLAKSSSRGLNLPTKRL-------- 231
++PCRTINAN A PSPSG+IF+G RD VPI+KRL SS RGL LP++
Sbjct: 2 TTPCRTINAN--AIAAPSPSGLIFNGFRDFVPIEKRLVISSFRGLKLPSRTTKTITSSDW 59
Query: 232 AWSLSSPGRLLLSSSSSSPVASSSTSAAVTSNSSNRLEALEEGIEKVKRVDRF 390
+WS SPGR L+S+S+S AS+STSAAVTSNS+NR EALEEGIEKV RF
Sbjct: 60 SWSYRSPGR--LASASTSTSASTSTSAAVTSNSTNRFEALEEGIEKVIYSCRF 110
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,940,565,389
Number of Sequences: 33410
Number of Extensions: 4940565389
Number of Successful Extensions: 184278111
Number of sequences better than 0.0: 0
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