BLASTX 7.6.2
Query= UN08706 /QuerySize=1318
(1317 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G22850.1 | Symbols: | INVOLVED IN: biological... 348 7e-096
TAIR9_protein||AT5G19070.1 | Symbols: | LOCATED IN: endomembran... 111 2e-024
TAIR9_protein||AT1G03260.1 | Symbols: | LOCATED IN: endomembran... 106 6e-023
>TAIR9_protein||AT1G22850.1 | Symbols: | INVOLVED IN: biological_process
unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: SNARE
associated Golgi protein (InterPro:IPR015414); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT1G03260.1); Has 3098
Blast hits to 3098 proteins in 664 species: Archae - 6; Bacteria -
1614; Metazoa - 182; Fungi - 59; Plants - 145; Viruses - 0; Other
Eukaryotes - 1092 (source: NCBI BLink). | chr1:8080671-8082816 REVERSE
Length = 345
Score = 348 bits (891), Expect = 7e-096
Identities = 182/194 (93%), Positives = 185/194 (95%), Gaps = 1/194 (0%)
Frame = -2
Query: 740 AGYALFIAVYAGLEILAIPALPLTMSAGLLFGSLVGTIIVSISGTMAASVAFLIARYFAR 561
AGYALFIAVYAGLEILAIPALPLTMSAGLLFG L+GTIIVSISGTMAASVAFLIARYFAR
Sbjct: 151 AGYALFIAVYAGLEILAIPALPLTMSAGLLFGPLIGTIIVSISGTMAASVAFLIARYFAR 210
Query: 560 ERILKLVEGNKKFLTIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS 381
ERILKLVE NKKFL IDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS
Sbjct: 211 ERILKLVEDNKKFLAIDKAIGENGFRVVTLLRLSPLLPFSLGNYLYGLTSVKFVPYVLGS 270
Query: 380 WLGMLPGSWAYVSAGAFGRAIIQEESTVGLPGGNGQLLTLGLGLLVTALAATYVTGLAKD 201
WLGMLPGSWAYVSAGAFGRAIIQEES VGLPGGNGQLLTLG+GLLVTALA TYVT LAKD
Sbjct: 271 WLGMLPGSWAYVSAGAFGRAIIQEESNVGLPGGNGQLLTLGVGLLVTALAGTYVTSLAKD 330
Query: 200 AIKDI-DDEYRDMR 162
AIKDI DDE RD +
Sbjct: 331 AIKDIDDDEKRDAK 344
Score = 189 bits (478), Expect = 5e-048
Identities = 112/161 (69%), Positives = 121/161 (75%), Gaps = 25/161 (15%)
Frame = -3
Query: 1168 MRSLT--LTLRSSSLPLFTFTSS---------SSSFR---RFHFLKPCSSLKQT-KKNQQ 1034
MRSLT LTLRSSS FT + SSSFR RFHFLKPCSSLKQT KK QQ
Sbjct: 1 MRSLTLGLTLRSSSSSSLPFTCNSRFCSPPPPSSSFRLYKRFHFLKPCSSLKQTKKKKQQ 60
Query: 1033 SLRRSPPPPSTAPPPKSLRWFFNPKSSDDGNEDDDATSPAAESDDD-GSNGDAALKGTIL 857
SL PSTAPPP+SLRWFFN KS++D N++DD S ESDDD GS GDAA+KGTIL
Sbjct: 61 SL------PSTAPPPQSLRWFFNSKSTNDENDEDDVKS---ESDDDGGSEGDAAIKGTIL 111
Query: 856 AGVLLVGTVGGFAGVGYVYRDQINTFLTQFSTFIEGYVRLG 734
AGVLL+GTVGGFAGVGYVYRDQINTFLTQFST+IEGY G
Sbjct: 112 AGVLLIGTVGGFAGVGYVYRDQINTFLTQFSTYIEGYGTAG 152
>TAIR9_protein||AT5G19070.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein
(InterPro:IPR015414); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT1G03260.1); Has 3029 Blast hits to 3029
proteins in 693 species: Archae - 10; Bacteria - 1724; Metazoa - 229;
Fungi - 74; Plants - 161; Viruses - 0; Other Eukaryotes - 831 (source:
NCBI BLink). | chr5:6375569-6377470 FORWARD
Length = 281
Score = 111 bits (275), Expect = 2e-024
Identities = 65/202 (32%), Positives = 112/202 (55%), Gaps = 5/202 (2%)
Frame = -2
Query: 791 DQYLSHSVLHFHRRLCPAGYALFIAVYAGLEILAIPALPLTMSAGLLFGSLVGTIIVSIS 612
++ L +L + L P G Y L +LA+PA LT+ G LFG +G + S+
Sbjct: 31 EKLLKDFLLWVEQDLGPWGPFALAVAYIPLTVLAVPASVLTLGGGYLFGLPIGFVADSVG 90
Query: 611 GTMAASVAFLIARYFARERILKLVEGNKKFLTIDKAIGENGFRVVTLLRLSPLLPFSLGN 432
T+ + AFL+ R + ++ ++ +F ++ AI ++GF++ LLRL+PLLPFS+ N
Sbjct: 91 ATLGSGAAFLLGRTIGKPFVVAKLKDYPQFQSVALAIEKSGFKICLLLRLAPLLPFSMLN 150
Query: 431 YLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAGAFGRAI--IQEESTVGLPGGNGQLLTLG 258
YL +T ++ PY+L SWLGM+P + A V G + + + + + PG L++
Sbjct: 151 YLLSVTPIRLGPYLLSSWLGMMPITLALVYVGTTLKDLSDVTHKWSEFSPGRWAFLIS-- 208
Query: 257 LGLLVTALAATYVTGLAKDAIK 192
L+++ + VT +AKDA++
Sbjct: 209 -SLVISVILMVCVTKVAKDALR 229
>TAIR9_protein||AT1G03260.1 | Symbols: | LOCATED IN: endomembrane system;
EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages;
CONTAINS InterPro DOMAIN/s: SNARE associated Golgi protein
(InterPro:IPR015414); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT5G19070.1); Has 3432 Blast hits to 3432
proteins in 730 species: Archae - 8; Bacteria - 1831; Metazoa - 239;
Fungi - 87; Plants - 162; Viruses - 0; Other Eukaryotes - 1105 (source:
NCBI BLink). | chr1:795678-798102 REVERSE
Length = 275
Score = 106 bits (262), Expect = 6e-023
Identities = 56/152 (36%), Positives = 86/152 (56%)
Frame = -2
Query: 791 DQYLSHSVLHFHRRLCPAGYALFIAVYAGLEILAIPALPLTMSAGLLFGSLVGTIIVSIS 612
+Q L +L L P G Y L I+A+PA LT+ G LFG VG + S+
Sbjct: 33 EQKLKDFLLWIKEDLGPFGPLALALAYIPLTIVAVPASVLTLGGGYLFGLPVGFVADSLG 92
Query: 611 GTMAASVAFLIARYFARERILKLVEGNKKFLTIDKAIGENGFRVVTLLRLSPLLPFSLGN 432
T+ A+ AFL+ R + + ++ KF + AI ++GF++V LLR+ P+LPF++ N
Sbjct: 93 ATLGATAAFLLGRTIGKSYVTSKIKHYPKFQAVSVAIQKSGFKIVLLLRVVPILPFNMLN 152
Query: 431 YLYGLTSVKFVPYVLGSWLGMLPGSWAYVSAG 336
YL +T V+ Y+L +WLGM+P ++A V G
Sbjct: 153 YLLSVTPVRLGEYMLATWLGMMPITFALVYVG 184
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,940,565,389
Number of Sequences: 33410
Number of Extensions: 4940565389
Number of Successful Extensions: 184278111
Number of sequences better than 0.0: 0
|
