BLASTX 7.6.2
Query= UN08727 /QuerySize=789
(788 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 prote... 299 1e-080
sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 prote... 194 9e-049
sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 prote... 143 2e-033
sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 prote... 142 3e-033
sp|P49508|PSB28_ODOSI Photosystem II reaction center psb28 prote... 142 3e-033
sp|P51347|PSB28_PORPU Photosystem II reaction center psb28 prote... 142 4e-033
sp|Q1XDE0|PSB28_PORYE Photosystem II reaction center psb28 prote... 142 4e-033
sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 prote... 136 2e-031
sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 prote... 136 2e-031
sp|P48264|PSB28_CYAPA Photosystem II reaction center psb28 prote... 135 5e-031
sp|Q8DLJ8|PSB28_THEEB Photosystem II reaction center Psb28 prote... 129 3e-029
sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center Psb28 prote... 127 1e-028
sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center Psb28 prote... 127 1e-028
sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 prote... 125 4e-028
sp|B7K2E0|PSB28_CYAP8 Photosystem II reaction center Psb28 prote... 123 1e-027
sp|B2J5G7|PSB28_NOSP7 Photosystem II reaction center Psb28 prote... 121 7e-027
sp|Q85G21|PSB28_CYAME Photosystem II reaction center psb28 prote... 121 9e-027
sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center Psb28 prote... 120 2e-026
sp|Q3MFL9|PSB28_ANAVT Photosystem II reaction center Psb28 prote... 119 2e-026
sp|B1XL01|PSB28_SYNP2 Photosystem II reaction center Psb28 prote... 119 2e-026
>sp|Q8W0Y8|PSB28_ARATH Photosystem II reaction center PSB28 protein,
chloroplastic OS=Arabidopsis thaliana GN=PSB28 PE=1 SV=1
Length = 183
Score = 299 bits (765), Expect = 1e-080
Identities = 155/182 (85%), Positives = 165/182 (90%), Gaps = 3/182 (1%)
Frame = +2
Query: 122 RSIGSLTSLTHSPRDVPRSSGIVLTSCSVIPITRSSFIGSPISLPRVHPPSSQTPPRPRN 301
RSIGSLTS+ HS R+VPR SGIVL+SCSV+PI SSF GSP+SLPR PSS+T RP
Sbjct: 5 RSIGSLTSVNHSQRNVPR-SGIVLSSCSVLPIKSSSFTGSPVSLPRAQ-PSSRTALRPMK 62
Query: 302 LLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEIT 481
+ ITMMVKP LQFIQGTDEMTIPDVKLTRSRDGSNGMALF+FDQPSVFDSSGEVGEIT
Sbjct: 63 -PVSITMMVKPALQFIQGTDEMTIPDVKLTRSRDGSNGMALFSFDQPSVFDSSGEVGEIT 121
Query: 482 GLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
GLYMIDEEGVIQSTDVNARFVNGKPEGIVAKH+MR+PKEWDRFMRFMERYSDQNGLQFVK
Sbjct: 122 GLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHIMRSPKEWDRFMRFMERYSDQNGLQFVK 181
Query: 662 KQ 667
KQ
Sbjct: 182 KQ 183
>sp|Q0JG75|PSB28_ORYSJ Photosystem II reaction center PSB28 protein,
chloroplastic OS=Oryza sativa subsp. japonica GN=PSB28 PE=2 SV=2
Length = 180
Score = 194 bits (491), Expect = 9e-049
Identities = 96/147 (65%), Positives = 114/147 (77%), Gaps = 3/147 (2%)
Frame = +2
Query: 224 SSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRD 403
SSF G + R P S R R + + M +P +QFIQGTDE TIPDV+LT+SRD
Sbjct: 37 SSFGGVSLQCRRTKPASLH---RSRPSMQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRD 93
Query: 404 GSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVM 583
G+NG+A+F FDQPSVFDSS E+G+ITG YMID+EGV+QS DV+A+FVNGKP I AK+VM
Sbjct: 94 GTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVM 153
Query: 584 RTPKEWDRFMRFMERYSDQNGLQFVKK 664
RTP+EWDRFMRFMERYS NGLQFVKK
Sbjct: 154 RTPREWDRFMRFMERYSQANGLQFVKK 180
>sp|A0T0H5|PSB28_PHATR Photosystem II reaction center psb28 protein
OS=Phaeodactylum tricornutum GN=psb28 PE=3 SV=1
Length = 115
Score = 143 bits (359), Expect = 2e-033
Identities = 64/109 (58%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFD-SSGEVGEITGLYMIDEEGVI 514
+QFI+G DE +PDV+LTRS+DGS G A F F P++ D ++ + GEITG+Y+IDEEG++
Sbjct: 5 IQFIKGLDEKVLPDVRLTRSKDGSTGTATFRFKNPNILDKTTAKEGEITGMYLIDEEGIL 64
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
++ DVNARFVNGKPE I + ++M++P+ WDRFMRFMERY + NGL F K
Sbjct: 65 ETRDVNARFVNGKPEAIESIYIMKSPEAWDRFMRFMERYGETNGLVFSK 113
>sp|O78418|PSB28_GUITH Photosystem II reaction center psb28 protein
OS=Guillardia theta GN=psb28 PE=3 SV=1
Length = 116
Score = 142 bits (357), Expect = 3e-033
Identities = 67/109 (61%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEV-GEITGLYMIDEEGVI 514
+QFIQG +E IPDV+LTRSRDGS G A F F P V ++ V G ITG+Y+IDEEG +
Sbjct: 4 IQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPKVLEAQSSVKGNITGMYLIDEEGQL 63
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ DVNARFVNGKP+GI A ++M++ ++WDRFMRFMERYS+ NGL F K
Sbjct: 64 VTRDVNARFVNGKPQGIEAVYIMQSKEDWDRFMRFMERYSEDNGLSFTK 112
>sp|P49508|PSB28_ODOSI Photosystem II reaction center psb28 protein OS=Odontella
sinensis GN=psb28 PE=3 SV=1
Length = 115
Score = 142 bits (357), Expect = 3e-033
Identities = 63/109 (57%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFD-SSGEVGEITGLYMIDEEGVI 514
+QFI+G DE +PDV+LTRSRDGS G A F F P++ D S+ + GEITG+Y+ID+EG +
Sbjct: 5 IQFIKGLDEKVLPDVRLTRSRDGSTGTATFRFKNPNILDKSTAKEGEITGMYLIDQEGTL 64
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
++ DVNA+F+NGKPE I + ++M++P+ WDRFMRFMERY + NGL F K
Sbjct: 65 ETRDVNAQFINGKPEAIESIYIMKSPEAWDRFMRFMERYGESNGLVFTK 113
>sp|P51347|PSB28_PORPU Photosystem II reaction center psb28 protein OS=Porphyra
purpurea GN=psb28 PE=3 SV=1
Length = 115
Score = 142 bits (356), Expect = 4e-033
Identities = 65/110 (59%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Frame = +2
Query: 335 TLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSS-GEVGEITGLYMIDEEGV 511
T+QFIQG +E +PDV+LTRSRDGS G A F F P + D+S + GEITG+Y++D EG
Sbjct: 3 TIQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQ 62
Query: 512 IQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
I + DVNA+F+NGKP+ I A HV+++P +WDRFMRFMERY+ NGL F K
Sbjct: 63 IITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGLTFTK 112
>sp|Q1XDE0|PSB28_PORYE Photosystem II reaction center psb28 protein OS=Porphyra
yezoensis GN=psb28 PE=3 SV=1
Length = 115
Score = 142 bits (356), Expect = 4e-033
Identities = 65/110 (59%), Positives = 84/110 (76%), Gaps = 1/110 (0%)
Frame = +2
Query: 335 TLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSS-GEVGEITGLYMIDEEGV 511
T+QFIQG +E +PDV+LTRSRDGS G A F F P + D+S + GEITG+Y++D EG
Sbjct: 3 TIQFIQGINEEVVPDVRLTRSRDGSTGTATFRFTNPKILDASMADKGEITGMYLMDTEGQ 62
Query: 512 IQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
I + DVNA+F+NGKP+ I A HV+++P +WDRFMRFMERY+ NGL F K
Sbjct: 63 IITRDVNAKFINGKPQAIEAVHVIKSPDDWDRFMRFMERYAQDNGLTFTK 112
>sp|Q00UI6|PSB28_OSTTA Photosystem II reaction center psb28 protein,
chloroplastic OS=Ostreococcus tauri GN=psb28 PE=3 SV=1
Length = 147
Score = 136 bits (341), Expect = 2e-031
Identities = 61/110 (55%), Positives = 86/110 (78%), Gaps = 2/110 (1%)
Frame = +2
Query: 335 TLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVI 514
++QF++G +E +P+V+LTRS+DGSNG A F F P VF++ G+ITG+++ DEEG +
Sbjct: 40 SIQFVKGQNETAVPEVRLTRSKDGSNGTAFFIFSDPDVFENG--QGDITGMFLTDEEGEM 97
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 664
+ DVNA+FVNGKP GI A++VM+T +W+RFMRFMERY++ NGL F KK
Sbjct: 98 STVDVNAKFVNGKPTGIEARYVMKTEADWNRFMRFMERYAEDNGLGFSKK 147
>sp|A0T0W9|PSB28_THAPS Photosystem II reaction center psb28 protein
OS=Thalassiosira pseudonana GN=psb28 PE=3 SV=1
Length = 114
Score = 136 bits (341), Expect = 2e-031
Identities = 62/109 (56%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEV-GEITGLYMIDEEGVI 514
+QFI+G DE +PDV+LTRSRDGS G A F F ++ + S + GEITG+YMIDEEG++
Sbjct: 5 IQFIKGIDEKVLPDVRLTRSRDGSTGTATFLFKNANLINKSLALNGEITGMYMIDEEGIL 64
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
++ DV+ARFVNGKP+ + + ++M++P+ WDRFMRFMERY + NGL F K
Sbjct: 65 ETRDVSARFVNGKPQAVESIYIMKSPEAWDRFMRFMERYGESNGLAFTK 113
>sp|P48264|PSB28_CYAPA Photosystem II reaction center psb28 protein
OS=Cyanophora paradoxa GN=psb28 PE=3 SV=1
Length = 112
Score = 135 bits (338), Expect = 5e-031
Identities = 64/108 (59%), Positives = 83/108 (76%), Gaps = 2/108 (1%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QFIQG DE IPDVKL+RS+DG+NG+A F FD+P+VFD GEITGLY+IDEEG +
Sbjct: 4 IQFIQGVDEEAIPDVKLSRSQDGANGIAKFYFDKPTVFDV--YQGEITGLYLIDEEGELS 61
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ V A+F+NGKP+ I A ++M +EW+RF+RFMERY+ QN L F K
Sbjct: 62 TRTVYAKFINGKPQSIEASYIMNNREEWERFIRFMERYAKQNDLSFTK 109
>sp|Q8DLJ8|PSB28_THEEB Photosystem II reaction center Psb28 protein
OS=Thermosynechococcus elongatus (strain BP-1) GN=psb28 PE=3 SV=1
Length = 116
Score = 129 bits (323), Expect = 3e-029
Identities = 58/110 (52%), Positives = 82/110 (74%), Gaps = 2/110 (1%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QFI+G +E +PDV+LTR+RDGS+G A+F FD P + E+TG+YM+DEEG I
Sbjct: 7 IQFIRGINEEVVPDVRLTRARDGSSGQAMFYFDNPKIVQEGNL--EVTGMYMVDEEGEIV 64
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKKQ 667
+ DVNA+F+NG+P I A + MR+P+EWDRF+RFM+RY+ +GL F K +
Sbjct: 65 TRDVNAKFINGQPVAIEATYTMRSPQEWDRFIRFMDRYAASHGLGFQKSE 114
>sp|Q31ML0|PSB28_SYNE7 Photosystem II reaction center Psb28 protein
OS=Synechococcus elongatus (strain PCC 7942) GN=psb28 PE=3 SV=1
Length = 112
Score = 127 bits (318), Expect = 1e-028
Identities = 58/109 (53%), Positives = 83/109 (76%), Gaps = 3/109 (2%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEV-GEITGLYMIDEEGVI 514
+QF +G DE +PDV+LTRSRDG NG A F FD+P GEV +ITG+Y++D+EG +
Sbjct: 5 IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGEL 62
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ +V A+F+NG+P G+ A ++MR+P+EWDRFMRFM+RY++ NGL F +
Sbjct: 63 ATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE 111
>sp|Q5MZB9|PSB28_SYNP6 Photosystem II reaction center Psb28 protein
OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
GN=psb28 PE=3 SV=1
Length = 112
Score = 127 bits (318), Expect = 1e-028
Identities = 58/109 (53%), Positives = 83/109 (76%), Gaps = 3/109 (2%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEV-GEITGLYMIDEEGVI 514
+QF +G DE +PDV+LTRSRDG NG A F FD+P GEV +ITG+Y++D+EG +
Sbjct: 5 IQFTRGIDEPVVPDVRLTRSRDGQNGTATFYFDEPQAL--VGEVRQDITGMYLLDDEGEL 62
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ +V A+F+NG+P G+ A ++MR+P+EWDRFMRFM+RY++ NGL F +
Sbjct: 63 ATREVKAKFINGQPAGLEAVYLMRSPEEWDRFMRFMQRYAEANGLGFTE 111
>sp|Q6B8Z7|PSB28_GRATL Photosystem II reaction center psb28 protein
OS=Gracilaria tenuistipitata var. liui GN=psb28 PE=3 SV=1
Length = 114
Score = 125 bits (313), Expect = 4e-028
Identities = 55/109 (50%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGE-VGEITGLYMIDEEGVI 514
+QFI+G +E + DV LTRSRDGS G A F F+ P + S E G+ITG+Y+ D+EG +
Sbjct: 4 IQFIKGINETVVADVSLTRSRDGSKGTATFRFNNPDILKSGMEDKGDITGMYLKDDEGEL 63
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ DV+A+F+NGKP+ + A +++++P+EWDRFMRFME+Y+++N L F K
Sbjct: 64 MTRDVSAKFINGKPQAVEAIYIIKSPQEWDRFMRFMEKYANENKLSFTK 112
>sp|B7K2E0|PSB28_CYAP8 Photosystem II reaction center Psb28 protein
OS=Cyanothece sp. (strain PCC 8801) GN=psb28 PE=3 SV=1
Length = 114
Score = 123 bits (308), Expect = 1e-027
Identities = 57/106 (53%), Positives = 78/106 (73%), Gaps = 1/106 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QF +G E IPDV+LTRSR G +G A F F +PS+F+S E+TG+Y++DEEG I
Sbjct: 4 IQFSRGVAEPVIPDVRLTRSRSGQSGTATFYFREPSIFNSE-STDEVTGMYLVDEEGEIT 62
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQF 655
+T+V +F+NGK I A +MR+P+EWDRFMRFMERY+ + GL+F
Sbjct: 63 TTEVKGKFINGKATDIEAILIMRSPEEWDRFMRFMERYAKEQGLEF 108
>sp|B2J5G7|PSB28_NOSP7 Photosystem II reaction center Psb28 protein OS=Nostoc
punctiforme (strain ATCC 29133 / PCC 73102) GN=psb28 PE=3 SV=1
Length = 113
Score = 121 bits (302), Expect = 7e-027
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 1/110 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QF +G DE+ IP+V+LTRSR G +G A F F P + D G +ITG+Y+ DEEG I
Sbjct: 4 IQFSRGLDEVVIPEVRLTRSRTGDSGTATFIFTNPKILD-QGSTEDITGMYLSDEEGEII 62
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKKQ 667
+ +V A+FVNGKPE + A +VM++ +EWDRFMRFMERY+++N L K +
Sbjct: 63 TREVKAKFVNGKPEALEALYVMKSAQEWDRFMRFMERYAEENDLGLSKAE 112
>sp|Q85G21|PSB28_CYAME Photosystem II reaction center psb28 protein
OS=Cyanidioschyzon merolae GN=psb28 PE=3 SV=1
Length = 109
Score = 121 bits (301), Expect = 9e-027
Identities = 59/106 (55%), Positives = 76/106 (71%), Gaps = 3/106 (2%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QFIQG DE IP V+LTRSRDG G A+F F QP + + GEITG+YMIDEEG I
Sbjct: 4 IQFIQGVDEDIIPTVRLTRSRDGQTGTAVFRFVQPKLLQ---QQGEITGMYMIDEEGEIV 60
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQF 655
+ +V A+FVNG+P+ I A +VM+ + W+RFMRFM RY++ GL F
Sbjct: 61 TREVQAKFVNGQPQIIEALYVMKNAQAWERFMRFMNRYAEAKGLSF 106
>sp|B0CE32|PSB28_ACAM1 Photosystem II reaction center Psb28 protein
OS=Acaryochloris marina (strain MBIC 11017) GN=psb28 PE=3 SV=1
Length = 111
Score = 120 bits (299), Expect = 2e-026
Identities = 56/108 (51%), Positives = 82/108 (75%), Gaps = 2/108 (1%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QFI+G DE IPDV+LTR++DGS+G A+F F+ P++ G++ E+ G+Y+ DEEG +
Sbjct: 5 IQFIRGVDEEVIPDVRLTRAKDGSSGRAIFYFENPNLI-QEGKL-EVMGMYLQDEEGELT 62
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ DV+A+FVNGKP I A + M++ +EWDRFMRFM RY++ +GL F K
Sbjct: 63 TLDVSAKFVNGKPHAIEANYDMKSEEEWDRFMRFMNRYAESHGLGFSK 110
>sp|Q3MFL9|PSB28_ANAVT Photosystem II reaction center Psb28 protein OS=Anabaena
variabilis (strain ATCC 29413 / PCC 7937) GN=psb28 PE=3 SV=1
Length = 111
Score = 119 bits (298), Expect = 2e-026
Identities = 56/108 (51%), Positives = 77/108 (71%), Gaps = 1/108 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QF +G DE IP+V+LTRSR G G A F F P + D G +ITG+Y+IDEEG I
Sbjct: 4 IQFSRGLDEEVIPEVRLTRSRTGDTGTATFIFTNPKILD-QGTTEDITGMYLIDEEGEII 62
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ +V +FVNG+PEG+ A +VM++ +EW+RF+RFMERY+ +N L F K
Sbjct: 63 TREVKGKFVNGRPEGVEAVYVMKSAQEWERFIRFMERYAQENDLGFSK 110
>sp|B1XL01|PSB28_SYNP2 Photosystem II reaction center Psb28 protein
OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=psb28
PE=3 SV=1
Length = 111
Score = 119 bits (298), Expect = 2e-026
Identities = 57/108 (52%), Positives = 78/108 (72%), Gaps = 1/108 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQ 517
+QF QG +E +P ++LTRS DGS G A+F+F+ P+ + EITG+Y+IDEEG I
Sbjct: 4 IQFSQGVNEPEVPGIRLTRSPDGSTGTAVFSFEDPAAL-AQESTDEITGMYLIDEEGEIV 62
Query: 518 STDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ +V A+F +GKP I A+ VMR+ EWDRFMRFMERY+ +NGL+F K
Sbjct: 63 TREVKAKFYDGKPRIIEARLVMRSTAEWDRFMRFMERYAAENGLEFTK 110
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,801,685,782
Number of Sequences: 518415
Number of Extensions: 36801685782
Number of Successful Extensions: 258262551
Number of sequences better than 0.0: 0
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