BLASTX 7.6.2
Query= UN08727 /QuerySize=789
(788 letters)
Database: UniProt/TrEMBL;
11,397,958 sequences; 3,661,877,547 total letters
Score E
Sequences producing significant alignments: (bits) Value
tr|C6SZM2|C6SZM2_SOYBN Photosystem II reaction center psb28 prot... 208 7e-052
tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 prot... 206 3e-051
tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 prot... 198 5e-049
tr|B9SKL9|B9SKL9_RICCO Photosystem II reaction center psb28 prot... 198 5e-049
tr|B9GRD0|B9GRD0_POPTR Photosystem II reaction center psb28 prot... 198 9e-049
tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 prot... 194 1e-047
tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 prot... 193 2e-047
tr|C5XHQ4|C5XHQ4_SORBI Photosystem II reaction center psb28 prot... 191 6e-047
tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center psb28 prot... 191 1e-046
tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center psb28 prot... 190 2e-046
tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 prot... 161 7e-038
tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 prot... 154 1e-035
tr|B7FMR0|B7FMR0_MEDTR Photosystem II reaction center psb28 prot... 147 1e-033
tr|C1E7N8|C1E7N8_9CHLO Photosystem II reaction center psb28 prot... 146 4e-033
tr|A8III5|A8III5_CHLRE Photosystem II reaction center psb28 prot... 144 9e-033
tr|A6MVQ3|A6MVQ3_RHDSA Photosystem II reaction center psb28 prot... 142 6e-032
tr|B8C304|B8C304_THAPS Photosystem II reaction center psb28 prot... 141 8e-032
tr|A4S851|A4S851_OSTLU Photosystem II reaction center psb28 prot... 139 5e-031
tr|C1MYZ0|C1MYZ0_9CHLO Photosystem II reaction center psb28 prot... 129 4e-028
tr|B7T1U3|B7T1U3_VAULI Photosystem II reaction center psb28 prot... 127 1e-027
>tr|C6SZM2|C6SZM2_SOYBN Photosystem II reaction center psb28 protein OS=Glycine
max PE=2 SV=1
Length = 179
Score = 208 bits (528), Expect = 7e-052
Identities = 108/179 (60%), Positives = 133/179 (74%), Gaps = 9/179 (5%)
Frame = +2
Query: 134 SLTSLTHSPRDVPRSSGIVLTSCSVIPITRSSFIGSPISLPRVHPP--SSQTPPRPRNLL 307
+L+S + PRS + S V T SSF G + LP + P TP +
Sbjct: 8 ALSSPLSNSLQKPRSCAV--PSSIVHQSTNSSFNGQTLHLPCLRLPVLRQNTP-----MH 60
Query: 308 LPITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGL 487
+P+ MMVKP +QFIQGTDE TIPDV+LT+SRDG+NGMA+F FDQPSVFDSSGE+G+ITG
Sbjct: 61 MPVIMMVKPKIQFIQGTDEQTIPDVRLTKSRDGTNGMAIFTFDQPSVFDSSGEIGDITGF 120
Query: 488 YMIDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 664
YMIDEEGV+QS DV+A+FVNGKP I AK+VMR+P++WDRFMRFMERYS+ NGLQF+KK
Sbjct: 121 YMIDEEGVLQSVDVSAKFVNGKPSIIEAKYVMRSPRDWDRFMRFMERYSNANGLQFIKK 179
>tr|A9PHJ0|A9PHJ0_POPTR Photosystem II reaction center psb28 protein OS=Populus
trichocarpa PE=2 SV=1
Length = 181
Score = 206 bits (523), Expect = 3e-051
Identities = 98/147 (66%), Positives = 119/147 (80%), Gaps = 3/147 (2%)
Frame = +2
Query: 224 SSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRD 403
S F G + LPR+ P + R L +TMMVKP +QF+QG DE T+PDV+LT+SRD
Sbjct: 38 SLFNGQSLCLPRLRLPLIRRKLRTSGL---VTMMVKPAIQFVQGADEQTVPDVRLTKSRD 94
Query: 404 GSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVM 583
G+NGMA+F FDQPSVFDSS EVG+ITG YMIDEEG++QS DVNA+FVNGKPE I AK++M
Sbjct: 95 GTNGMAIFTFDQPSVFDSSAEVGDITGFYMIDEEGILQSVDVNAKFVNGKPERIEAKYIM 154
Query: 584 RTPKEWDRFMRFMERYSDQNGLQFVKK 664
RTP+EWDRFMRFME+Y++ NGLQFVKK
Sbjct: 155 RTPREWDRFMRFMEKYANANGLQFVKK 181
>tr|A9NPG6|A9NPG6_PICSI Photosystem II reaction center psb28 protein OS=Picea
sitchensis PE=2 SV=1
Length = 202
Score = 198 bits (503), Expect = 5e-049
Identities = 97/145 (66%), Positives = 118/145 (81%), Gaps = 1/145 (0%)
Frame = +2
Query: 233 IGSPISLPRVHPPSS-QTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGS 409
I S S R+H P+S R +P+TMM KP +QFIQGT+E +IPDVKLT+SRDG+
Sbjct: 58 ISSTFSGQRLHLPASLWVSARGSRKSIPVTMMSKPVIQFIQGTNEQSIPDVKLTKSRDGT 117
Query: 410 NGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVMRT 589
GMA F+FDQPSVFDSS E+G+ITGLYMIDEEGV+QS DVNA+FVNGKP I A+++MR+
Sbjct: 118 IGMATFSFDQPSVFDSSRELGDITGLYMIDEEGVLQSVDVNAKFVNGKPSTIEARYIMRS 177
Query: 590 PKEWDRFMRFMERYSDQNGLQFVKK 664
P EWDRFMRFMERYS++NGLQF+KK
Sbjct: 178 PPEWDRFMRFMERYSNENGLQFIKK 202
>tr|B9SKL9|B9SKL9_RICCO Photosystem II reaction center psb28 protein OS=Ricinus
communis GN=RCOM_0542030 PE=3 SV=1
Length = 178
Score = 198 bits (503), Expect = 5e-049
Identities = 98/149 (65%), Positives = 118/149 (79%), Gaps = 5/149 (3%)
Frame = +2
Query: 215 ITRSSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTR 394
I RS F G + L HP + T + ITMM KP++QFIQGTDE TIPDV+LT+
Sbjct: 34 IARSPFSGKSLRLS--HPQLTSTRQKSSRF---ITMMAKPSIQFIQGTDEQTIPDVRLTK 88
Query: 395 SRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAK 574
SRDG+NGMA+F FD+PSVFDSS E+G+ITG YMIDEEGV+QS DV+A+FVNGKP I AK
Sbjct: 89 SRDGTNGMAIFTFDEPSVFDSSAELGDITGFYMIDEEGVLQSVDVSAKFVNGKPARIEAK 148
Query: 575 HVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+VMR+P+EWDRFMRFMERY++ NGLQFVK
Sbjct: 149 YVMRSPREWDRFMRFMERYANANGLQFVK 177
>tr|B9GRD0|B9GRD0_POPTR Photosystem II reaction center psb28 protein OS=Populus
trichocarpa GN=POPTRDRAFT_799516 PE=3 SV=1
Length = 115
Score = 198 bits (501), Expect = 9e-049
Identities = 89/115 (77%), Positives = 105/115 (91%)
Frame = +2
Query: 320 MMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMID 499
MMVKP +QF+QG DE T+PDV+LT+SRDG+NGMA+F FDQPSVFDSS EVG+ITG YMID
Sbjct: 1 MMVKPAIQFVQGADEQTVPDVRLTKSRDGTNGMAIFTFDQPSVFDSSAEVGDITGFYMID 60
Query: 500 EEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 664
EEG++QS DVNA+FVNGKPE I AK++MRTP+EWDRFMRFMERY++ NGLQFVKK
Sbjct: 61 EEGILQSVDVNAKFVNGKPERIEAKYIMRTPREWDRFMRFMERYANANGLQFVKK 115
>tr|A3A1D0|A3A1D0_ORYSJ Photosystem II reaction center psb28 protein OS=Oryza
sativa subsp. japonica GN=OsJ_04705 PE=2 SV=1
Length = 180
Score = 194 bits (491), Expect = 1e-047
Identities = 96/147 (65%), Positives = 114/147 (77%), Gaps = 3/147 (2%)
Frame = +2
Query: 224 SSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRD 403
SSF G + R P S R R + + M +P +QFIQGTDE TIPDV+LT+SRD
Sbjct: 37 SSFGGVSLQCRRTKPASLH---RSRPSMQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRD 93
Query: 404 GSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVM 583
G+NG+A+F FDQPSVFDSS E+G+ITG YMID+EGV+QS DV+A+FVNGKP I AK+VM
Sbjct: 94 GTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVM 153
Query: 584 RTPKEWDRFMRFMERYSDQNGLQFVKK 664
RTP+EWDRFMRFMERYS NGLQFVKK
Sbjct: 154 RTPREWDRFMRFMERYSQANGLQFVKK 180
>tr|A2WYW0|A2WYW0_ORYSI Photosystem II reaction center psb28 protein OS=Oryza
sativa subsp. indica GN=OsI_05122 PE=3 SV=1
Length = 180
Score = 193 bits (490), Expect = 2e-047
Identities = 96/147 (65%), Positives = 114/147 (77%), Gaps = 3/147 (2%)
Frame = +2
Query: 224 SSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRD 403
SSF G + R P S R R + + M +P +QFIQGTDE TIPDV+LT+SRD
Sbjct: 37 SSFGGVSLQCRRTKPASLH---RSRPSVQVVMMAARPAIQFIQGTDEQTIPDVRLTKSRD 93
Query: 404 GSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVM 583
G+NG+A+F FDQPSVFDSS E+G+ITG YMID+EGV+QS DV+A+FVNGKP I AK+VM
Sbjct: 94 GTNGVAIFTFDQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPALIEAKYVM 153
Query: 584 RTPKEWDRFMRFMERYSDQNGLQFVKK 664
RTP+EWDRFMRFMERYS NGLQFVKK
Sbjct: 154 RTPREWDRFMRFMERYSQANGLQFVKK 180
>tr|C5XHQ4|C5XHQ4_SORBI Photosystem II reaction center psb28 protein OS=Sorghum
bicolor GN=Sb03g045320 PE=3 SV=1
Length = 176
Score = 191 bits (485), Expect = 6e-047
Identities = 92/138 (66%), Positives = 112/138 (81%), Gaps = 5/138 (3%)
Frame = +2
Query: 263 HPPSSQTPPRPRNL-----LLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALF 427
H S Q P RPR + + M +P++QFIQGTDE TIPDV+LT+SRDG+NG+A+F
Sbjct: 38 HGVSVQCPGRPRQATPRRGVQVVMMAARPSIQFIQGTDEQTIPDVRLTKSRDGTNGVAIF 97
Query: 428 NFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDR 607
F+QPSVFDSS E+G+ITGLYMID+EGV+QS DV+A+FVNGKP I AK+VMRTP++WDR
Sbjct: 98 TFEQPSVFDSSAELGDITGLYMIDDEGVLQSVDVSAKFVNGKPARIEAKYVMRTPRDWDR 157
Query: 608 FMRFMERYSDQNGLQFVK 661
FMRFMERYS NGLQFVK
Sbjct: 158 FMRFMERYSQANGLQFVK 175
>tr|B6SRI0|B6SRI0_MAIZE Photosystem II reaction center psb28 protein OS=Zea mays
PE=2 SV=1
Length = 180
Score = 191 bits (483), Expect = 1e-046
Identities = 92/147 (62%), Positives = 114/147 (77%), Gaps = 2/147 (1%)
Frame = +2
Query: 221 RSSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSR 400
+S F G + P P TP R + + + V+P +QFIQGTDE TIPDV+LT+SR
Sbjct: 35 QSPFHGVSVQCP--GRPRRATPRRGPQVAVVVAAAVRPAIQFIQGTDEQTIPDVRLTKSR 92
Query: 401 DGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHV 580
DG+NG+A+F F+QPSVFDSS E+G+ITG YMID+EGV+QS DV+A+FVNGKP I AK+V
Sbjct: 93 DGTNGVAIFTFEQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPARIEAKYV 152
Query: 581 MRTPKEWDRFMRFMERYSDQNGLQFVK 661
MRTP++WDRFMRFMERYS NGLQFVK
Sbjct: 153 MRTPRDWDRFMRFMERYSQANGLQFVK 179
>tr|B6TYC5|B6TYC5_MAIZE Photosystem II reaction center psb28 protein OS=Zea mays
PE=2 SV=1
Length = 179
Score = 190 bits (480), Expect = 2e-046
Identities = 93/147 (63%), Positives = 115/147 (78%), Gaps = 3/147 (2%)
Frame = +2
Query: 221 RSSFIGSPISLPRVHPPSSQTPPRPRNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSR 400
+S F G + P P TP R R + + + V+P +QFIQGTDE TIPDV+LT+SR
Sbjct: 35 QSPFHGVSVQCP--GRPRRATPRRGRQVAV-VAAAVRPAIQFIQGTDEQTIPDVRLTKSR 91
Query: 401 DGSNGMALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHV 580
DG+NG+A+F F+QPSVFDSS E+G+ITG YMID+EGV+QS DV+A+FVNGKP I AK+V
Sbjct: 92 DGTNGVAIFTFEQPSVFDSSAELGDITGFYMIDDEGVLQSVDVSAKFVNGKPARIEAKYV 151
Query: 581 MRTPKEWDRFMRFMERYSDQNGLQFVK 661
MRTP++WDRFMRFMERYS NGLQFVK
Sbjct: 152 MRTPRDWDRFMRFMERYSQANGLQFVK 178
>tr|A9TT51|A9TT51_PHYPA Photosystem II reaction center psb28 protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_61027 PE=3 SV=1
Length = 115
Score = 161 bits (407), Expect = 7e-038
Identities = 73/114 (64%), Positives = 95/114 (83%)
Frame = +2
Query: 320 MMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMID 499
M VKP LQFI+G DE ++P+++LTRS DG+NG A+F FDQPSVFDSS E+G+ITGLYM+D
Sbjct: 1 MQVKPVLQFIRGVDERSVPEIRLTRSPDGTNGKAIFVFDQPSVFDSSRELGDITGLYMLD 60
Query: 500 EEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
EEGV+ + DV+A+F+NGKP I ++++MR EWDRFMRFMERY+ +N L FVK
Sbjct: 61 EEGVLSTVDVSAKFLNGKPSKIESQYIMRNTTEWDRFMRFMERYAKENQLGFVK 114
>tr|A9SHP3|A9SHP3_PHYPA Photosystem II reaction center psb28 protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_57848 PE=3 SV=1
Length = 115
Score = 154 bits (387), Expect = 1e-035
Identities = 68/114 (59%), Positives = 93/114 (81%)
Frame = +2
Query: 320 MMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYMID 499
M VKP +QFI+G DE +P+++LTRS +G+NG A+F FDQPSVFD+S E+G+ITGLY++D
Sbjct: 1 MQVKPVIQFIRGVDERVVPEIRLTRSPNGTNGKAIFVFDQPSVFDASRELGDITGLYLVD 60
Query: 500 EEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
EEG + + +V+A+F+NGKP I +++VMR EWDRFMRFMERY+ +N L FVK
Sbjct: 61 EEGTLSTVEVSAKFLNGKPSKIESQYVMRNTTEWDRFMRFMERYAKENQLGFVK 114
>tr|B7FMR0|B7FMR0_MEDTR Photosystem II reaction center psb28 protein OS=Medicago
truncatula PE=3 SV=1
Length = 83
Score = 147 bits (370), Expect = 1e-033
Identities = 66/82 (80%), Positives = 76/82 (92%)
Frame = +2
Query: 416 MALFNFDQPSVFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPK 595
MA+F FDQPSVFDSSGEVG+ITG YMIDEEGV+QS DVNA+FVNGKP GI AK++MRTP+
Sbjct: 1 MAIFRFDQPSVFDSSGEVGDITGFYMIDEEGVLQSVDVNAKFVNGKPSGIEAKYIMRTPR 60
Query: 596 EWDRFMRFMERYSDQNGLQFVK 661
+WDRFMRF+ERYSD NGLQF+K
Sbjct: 61 DWDRFMRFVERYSDANGLQFIK 82
>tr|C1E7N8|C1E7N8_9CHLO Photosystem II reaction center psb28 protein
OS=Micromonas sp. RCC299 GN=PSBW1 PE=3 SV=1
Length = 118
Score = 146 bits (366), Expect = 4e-033
Identities = 63/118 (53%), Positives = 94/118 (79%)
Frame = +2
Query: 314 ITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYM 493
+T+ ++QF++GT+E ++PDVKLTRS+DG+NG A F F +P VF+++ GEITG+++
Sbjct: 1 MTVAADTSIQFVKGTNETSVPDVKLTRSKDGTNGTAFFWFSEPDVFEATELEGEITGMFL 60
Query: 494 IDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKKQ 667
ID+EG + + DVNA+F+NGKP+GI A +VM++ EW+RFMRFMERY++ NGL F K+
Sbjct: 61 IDQEGELSTVDVNAKFLNGKPQGIEATYVMKSTNEWNRFMRFMERYAEDNGLGFAAKK 118
>tr|A8III5|A8III5_CHLRE Photosystem II reaction center psb28 protein
OS=Chlamydomonas reinhardtii GN=PSB28 PE=3 SV=1
Length = 144
Score = 144 bits (363), Expect = 9e-033
Identities = 70/132 (53%), Positives = 95/132 (71%), Gaps = 6/132 (4%)
Frame = +2
Query: 269 PSSQTPPRP-RNLLLPITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPS 445
P PRP RN+ +LQFI+G E T+P+V+LTRSR G+NG A+F F+ PS
Sbjct: 18 PMQAVAPRPVRNVACDAA-----SLQFIKGVAEPTVPEVRLTRSRTGANGTAIFVFENPS 72
Query: 446 VFDSSGEVGEITGLYMIDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFME 625
+F +SGE+G+ITGL+M+D+EG + +TDV A+F+NGKP+ I AK MR+ EWDRFMRFM+
Sbjct: 73 IFQASGEMGDITGLFMVDDEGTLSTTDVKAKFINGKPQAIEAKFNMRSQFEWDRFMRFMD 132
Query: 626 RYSDQNGLQFVK 661
RY+ +N L F K
Sbjct: 133 RYAAENDLGFEK 144
>tr|A6MVQ3|A6MVQ3_RHDSA Photosystem II reaction center psb28 protein
OS=Rhodomonas salina GN=psb28 PE=3 SV=1
Length = 116
Score = 142 bits (356), Expect = 6e-032
Identities = 68/109 (62%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDS-SGEVGEITGLYMIDEEGVI 514
+QFIQG +E IPDV+LTRSRDGS G A F F P V ++ + G ITG+Y+IDEEG I
Sbjct: 4 IQFIQGVNEDVIPDVRLTRSRDGSTGTATFRFANPQVLEAQTTNKGTITGMYLIDEEGQI 63
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+ DVNARFVNGKP+GI A H+M++ ++WDRFMRFMERYS+ NGL F K
Sbjct: 64 VTRDVNARFVNGKPQGIEAVHIMQSKEDWDRFMRFMERYSEDNGLTFTK 112
>tr|B8C304|B8C304_THAPS Photosystem II reaction center psb28 protein (Fragment)
OS=Thalassiosira pseudonana GN=psbW PE=3 SV=1
Length = 113
Score = 141 bits (355), Expect = 8e-032
Identities = 62/109 (56%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFD-SSGEVGEITGLYMIDEEGVI 514
+QF++G +E +P +KLTR+RDGS+G+A FNF+ P+VFD S+ GEITG++++DEEG +
Sbjct: 3 IQFVKGLEEKVVPGIKLTRARDGSSGIATFNFNNPNVFDASTSSQGEITGMFLVDEEGEM 62
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVK 661
+++DVNA+F+NGKP+ I + VM++P+EWDRFMRFMERY + NGL F K
Sbjct: 63 RTSDVNAKFLNGKPQSIESVLVMQSPEEWDRFMRFMERYGEANGLGFTK 111
>tr|A4S851|A4S851_OSTLU Photosystem II reaction center psb28 protein
OS=Ostreococcus lucimarinus (strain CCE9901) GN=psbW PE=3 SV=1
Length = 129
Score = 139 bits (348), Expect = 5e-031
Identities = 62/117 (52%), Positives = 90/117 (76%), Gaps = 2/117 (1%)
Frame = +2
Query: 314 ITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYM 493
+T ++QF++G +E ++P+VKLTRS+DGSNG A F F +P VF++ G+ITG+++
Sbjct: 15 VTRAGTTSIQFVKGQNETSVPEVKLTRSKDGSNGTAFFIFAEPDVFENG--QGDITGMFL 72
Query: 494 IDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 664
DEEG + + DVNA+F+NGKP GI A++VM+T ++WDRFMRFM RY++ NGL F KK
Sbjct: 73 NDEEGEMSTVDVNAKFINGKPSGIEARYVMKTERDWDRFMRFMARYAEDNGLGFAKK 129
>tr|C1MYZ0|C1MYZ0_9CHLO Photosystem II reaction center psb28 protein
OS=Micromonas pusilla CCMP1545 GN=PSBW1 PE=3 SV=1
Length = 151
Score = 129 bits (323), Expect = 4e-028
Identities = 58/117 (49%), Positives = 85/117 (72%)
Frame = +2
Query: 314 ITMMVKPTLQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDSSGEVGEITGLYM 493
+ + K ++QFI+G +E T PDV+LTRS+DG+NG A F F + +F++ G+ITG+++
Sbjct: 35 VAPVAKTSIQFIKGLEETTQPDVRLTRSKDGTNGTAFFIFKESGIFEAPELPGDITGMFL 94
Query: 494 IDEEGVIQSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 664
DEEG I + DV +F NGKP I A++VM++ EW+RFMRFMERY++ NG+ F KK
Sbjct: 95 TDEEGEISTVDVKCKFSNGKPVQIEAQYVMKSTNEWNRFMRFMERYAEDNGMGFSKK 151
>tr|B7T1U3|B7T1U3_VAULI Photosystem II reaction center psb28 protein
OS=Vaucheria litorea GN=psb28 PE=3 SV=1
Length = 114
Score = 127 bits (319), Expect = 1e-027
Identities = 60/110 (54%), Positives = 82/110 (74%), Gaps = 1/110 (0%)
Frame = +2
Query: 338 LQFIQGTDEMTIPDVKLTRSRDGSNGMALFNFDQPSVFDS-SGEVGEITGLYMIDEEGVI 514
+QFIQG +E+ IP VKLTRS++G+ G A F F S+F++ S + GEITG+++ID EG++
Sbjct: 5 IQFIQGINEINIPRVKLTRSQNGTTGTATFLFTNSSLFNNESSKQGEITGMFLIDNEGIL 64
Query: 515 QSTDVNARFVNGKPEGIVAKHVMRTPKEWDRFMRFMERYSDQNGLQFVKK 664
+ DVN RF NG+P I A ++M P WDRFMRFMERY+ +NGL F+KK
Sbjct: 65 TTKDVNVRFKNGQPINIEALYIMTNPTNWDRFMRFMERYAKENGLTFIKK 114
Database: UniProt/TrEMBL
Posted date: Sat Aug 07 14:51:12 2010
Number of letters in database: 3,661,877,547
Number of sequences in database: 11,397,958
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 724,207,012,813
Number of Sequences: 11397958
Number of Extensions: 724207012813
Number of Successful Extensions: 306034353
Number of sequences better than 0.0: 0
|
