Library    |     Search    |     Batch query    |     SNP    |     SSR  

TAIR blast output of UN08779


BLASTX 7.6.2

Query= UN08779 /QuerySize=560
        (559 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT5G44540.1 | Symbols:  | tapetum-specific protei...    165   2e-041
TAIR9_protein||AT4G20420.1 | Symbols:  | tapetum-specific protei...     76   1e-014

>TAIR9_protein||AT5G44540.1 | Symbols:  | tapetum-specific protein-related |
        chr5:17941287-17941646 REVERSE

          Length = 120

 Score =  165 bits (416), Expect = 2e-041
 Identities = 89/121 (73%), Positives = 96/121 (79%), Gaps = 2/121 (1%)
 Frame = +3

Query:  54 MSKMSKVSSFCLLLLVVFFVLSSQPALSLRVPKPQ-SETASPQTMIDDDSSPIMGMIDHA 230
           MSK+SK SS CLLLL VFF+ SSQPALSLR PK Q SE  S QT++++ SS       +A
Sbjct:   1 MSKISKASSLCLLLL-VFFLFSSQPALSLRGPKLQSSEPKSAQTLMNNSSSMNKINSGNA 59

Query: 231 KSMIAGFFSHKFPLMGWPFPKYPPFTMVNPNIPTNPSGAQEESEKLPSSPSNLNKDGGNA 410
           KSMIAGFFSHKFPL GWPFPKYPPFTMVNPNI TNPSGAQEES KLPSSPS  NKDG NA
Sbjct:  60 KSMIAGFFSHKFPLKGWPFPKYPPFTMVNPNIATNPSGAQEESAKLPSSPSKDNKDGRNA 119

Query: 411 * 413
           *
Sbjct: 120 * 120

>TAIR9_protein||AT4G20420.1 | Symbols:  | tapetum-specific protein-related |
        chr4:11017041-11017469 FORWARD

          Length = 143

 Score =  76 bits (186), Expect = 1e-014
 Identities = 44/85 (51%), Positives = 53/85 (62%), Gaps = 12/85 (14%)
 Frame = +3

Query: 195 DSSPIMGMIDH--AKSMIAGFFSHKFPLMGWPFPKYPPFTM---VNPNIP---TNPSGA- 347
           DSS  M  ID    KS IAGFF ++ P  GWPF KY PF M    NP++P   T  SGA 
Sbjct:  59 DSSSSMTHIDEPATKSAIAGFFRYRLPFQGWPFHKYAPFPMGTPTNPSVPVTSTPSSGAA 118

Query: 348 ---QEESEKLPSSPSNLNKDGGNA* 413
              +EE+EK+PS+PS  N+DGGNA*
Sbjct: 119 AAEEEETEKVPSAPSKGNRDGGNA* 143

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,940,565,389
Number of Sequences: 33410
Number of Extensions: 4940565389
Number of Successful Extensions: 184278111
Number of sequences better than 0.0: 0