BLASTX 7.6.2
Query= UN08829 /QuerySize=718
(717 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1 162 3e-039
sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1 145 4e-034
sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=M... 142 3e-033
sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1 135 4e-031
sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE... 131 4e-030
sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musc... 89 2e-017
sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taur... 89 3e-017
sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sap... 87 7e-017
sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus g... 87 1e-016
sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus g... 86 3e-016
sp|P26584|HMGB2_CHICK High mobility group protein B2 OS=Gallus g... 82 3e-015
sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taur... 81 5e-015
sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithr... 81 5e-015
sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Calliceb... 81 5e-015
sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis fa... 81 5e-015
sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus ca... 81 5e-015
sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sap... 81 5e-015
sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca f... 81 5e-015
sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) ... 81 7e-015
sp|P41848|SSP1A_CAEEL FACT complex subunit SSRP1-A OS=Caenorhabd... 78 6e-014
>sp|P26585|HMGL_SOYBN HMG1/2-like protein OS=Glycine max PE=2 SV=1
Length = 152
Score = 162 bits (408), Expect = 3e-039
Identities = 86/152 (56%), Positives = 111/152 (73%), Gaps = 15/152 (9%)
Frame = -2
Query: 608 MKGGETKAQAKGTDDRL-------KTRGKK-AGK-KAAKDPNKPKRPPSAFFVFLEGFRK 456
MKGG++K ++K D +L T+ +K AGK KAAKDPNKPKRPPSAFFVF+E FRK
Sbjct: 1 MKGGKSKTESKRADPKLAVNKKGAATKARKPAGKGKAAKDPNKPKRPPSAFFVFMEEFRK 60
Query: 455 EFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMKLANGT 276
FN +P+NK+V AVGKAAGAKWK+M+D +KAP+VAK+E +K EY K M+ YN K A G
Sbjct: 61 VFNKEHPENKAVSAVGKAAGAKWKTMSDAEKAPYVAKSEKRKVEYEKNMRAYNKKQAEGP 120
Query: 275 STAGDDDSDKSKSEVN------EGASEEEEDD 198
+ +++S+KS SEVN EG+ EEE+DD
Sbjct: 121 TGGDEEESEKSVSEVNDEDDDEEGSGEEEDDD 152
>sp|P40619|HMGL_IPONI HMG1/2-like protein OS=Ipomoea nil PE=2 SV=1
Length = 144
Score = 145 bits (364), Expect = 4e-034
Identities = 76/148 (51%), Positives = 103/148 (69%), Gaps = 15/148 (10%)
Frame = -2
Query: 608 MKGGETKAQAKGTDDRLKTRGK----KAGKKAAKDPNKPKRPPSAFFVFLEGFRKEFNLA 441
MKGG++KA+ +D++L + + K KKA KDPNKPKRPPSAFFVF+E FRK +
Sbjct: 1 MKGGKSKAK---SDNKLAVKKQAADTKKTKKAVKDPNKPKRPPSAFFVFMEDFRKTYKEK 57
Query: 440 NPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMKLANGTSTAGD 261
+P+NKSV VGKA G KWK +T +KAPF++KAE +K EY K +Q YN K A G A +
Sbjct: 58 HPNNKSVAVVGKAGGDKWKQLTAAEKAPFISKAEKRKQEYEKNLQAYNKKQAAG--AAEE 115
Query: 260 DDSDKSKSEVN------EGASEEEEDDD 195
++SDKS+SEVN +G+ E++ +DD
Sbjct: 116 EESDKSRSEVNDDDEDQDGSGEDDSEDD 143
>sp|P27347|MNB1B_MAIZE DNA-binding protein MNB1B OS=Zea mays GN=MNB1B PE=1 SV=1
Length = 157
Score = 142 bits (357), Expect = 3e-033
Identities = 85/161 (52%), Positives = 100/161 (62%), Gaps = 28/161 (17%)
Frame = -2
Query: 608 MKGGETKAQAKGTDDRLKTRGKKAGK-------KAAKDPNKPKRPPSAFFVFLEGFRKEF 450
MKG ++K AK D +L + K A K KA KDPNKPKR PSAFFVF+E FRKEF
Sbjct: 1 MKGAKSKGAAK-ADAKLAVKSKGAEKPAKGRKGKAGKDPNKPKRAPSAFFVFMEEFRKEF 59
Query: 449 NLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMKLANGTST 270
NP NKSV AVGKAAG +WKS+++ DKAP+VAKA K EY K + YN G ST
Sbjct: 60 KEKNPKNKSVAAVGKAAGDRWKSLSESDKAPYVAKANKLKLEYNKAIAAYN----KGEST 115
Query: 269 AG------------DDDSDKSKSEVN----EGASEEEEDDD 195
A +++SDKSKSEVN E SEE+EDDD
Sbjct: 116 AAKKAPAKEEEEEDEEESDKSKSEVNDEDDEEGSEEDEDDD 156
>sp|P40620|HMGL_VICFA HMG1/2-like protein OS=Vicia faba PE=2 SV=1
Length = 149
Score = 135 bits (338), Expect = 4e-031
Identities = 71/142 (50%), Positives = 93/142 (65%), Gaps = 8/142 (5%)
Frame = -2
Query: 605 KGGETKAQAKGTDDRLKTRGKKAGKKAA-----KDPNKPKRPPSAFFVFLEGFRKEFNLA 441
KG KA+ K ++ K GKK A KDPNKPKRPPSAFFVF+ FR+++
Sbjct: 7 KGESKKAETKLAVNKKGAAATKGGKKPAKGKEPKDPNKPKRPPSAFFVFMADFREQYKKD 66
Query: 440 NPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMKLANGTSTAGD 261
+P+NKSV AVGKA G +WKS+++E+KAP+V +A KK EY T+Q YN KL G
Sbjct: 67 HPNNKSVAAVGKACGEEWKSLSEEEKAPYVDRALKKKEEYEITLQAYNKKLEGKDDEEG- 125
Query: 260 DDSDKSKSEVNEGASEEEEDDD 195
SDKSKSEVN+ +EE+++D
Sbjct: 126 --SDKSKSEVNDEDEDEEDEED 145
>sp|P40621|HMGL_WHEAT HMG1/2-like protein OS=Triticum aestivum PE=2 SV=1
Length = 161
Score = 131 bits (329), Expect = 4e-030
Identities = 73/157 (46%), Positives = 93/157 (59%), Gaps = 20/157 (12%)
Frame = -2
Query: 608 MKGGETKAQAKGTDDRLKTRGKKAGK--------KAAKDPNKPKRPPSAFFVFLEGFRKE 453
MKG ++K AK D +L + K A K KA KDPNKPKR PSAFFVF+ FR+E
Sbjct: 1 MKGAKSKGAAK-ADAKLAVKSKGAEKPAAKGKKGKAGKDPNKPKRAPSAFFVFMGEFREE 59
Query: 452 FNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYN-------- 297
F NP NKSV AVGKAAG +WKS+++ +KAP+VAKA K EY K + YN
Sbjct: 60 FKQKNPKNKSVAAVGKAAGERWKSLSESEKAPYVAKANKLKGEYNKAIAAYNKGESAAAA 119
Query: 296 ---MKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
A +++SDKSKSE+N+ +E D+D
Sbjct: 120 APKKAAAKEVEEEDEEESDKSKSEINDDDDDEGSDED 156
>sp|O54879|HMGB3_MOUSE High mobility group protein B3 OS=Mus musculus GN=Hmgb3
PE=2 SV=3
Length = 200
Score = 89 bits (220), Expect = 2e-017
Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Frame = -2
Query: 689 EKEKKK--------SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG 534
E+ KKK +E S S+ KT++ + S+ KA D +K G G
Sbjct: 25 EEHKKKNPEVPVNFAEFSKKCSERWKTMSSKEKSKF-DEMAKADKVRYDREMKDYGPAKG 83
Query: 533 KKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPF 354
K KDPN PKRPPS FF+F FR + NP S+G V K G W +++D +K P+
Sbjct: 84 GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLSDNEKQPY 142
Query: 353 VAKAETKKSEYTKTMQKYNMK----LANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
V KA K +Y K + Y K A G + ++ + E E EEEE++D
Sbjct: 143 VTKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEEEEEEEEEEEEEEEED 199
>sp|Q32L31|HMGB3_BOVIN High mobility group protein B3 OS=Bos taurus GN=HMGB3
PE=2 SV=2
Length = 200
Score = 89 bits (218), Expect = 3e-017
Identities = 60/177 (33%), Positives = 84/177 (47%), Gaps = 14/177 (7%)
Frame = -2
Query: 689 EKEKKK--------SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG 534
E+ KKK +E S S+ KT++ + S+ KA D +K G G
Sbjct: 25 EEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF-DEMAKADKVRYDREMKDYGPAKG 83
Query: 533 KKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPF 354
K KDPN PKRPPS FF+F FR + ANP S+G V K G W +++D +K P+
Sbjct: 84 GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSANP-GISIGDVAKKLGEMWNNLSDSEKQPY 142
Query: 353 VAKAETKKSEYTKTMQKYNMK----LANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
+ KA K +Y K + Y K A G + ++ E E EEEE++D
Sbjct: 143 INKAAKLKEKYEKDVADYKSKGKFDGAKGAAKVARKKVEEEDEEDEEEEEEEEEEED 199
>sp|O15347|HMGB3_HUMAN High mobility group protein B3 OS=Homo sapiens GN=HMGB3
PE=1 SV=4
Length = 200
Score = 87 bits (215), Expect = 7e-017
Identities = 59/177 (33%), Positives = 82/177 (46%), Gaps = 14/177 (7%)
Frame = -2
Query: 689 EKEKKK--------SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG 534
E+ KKK +E S S+ KT++ + S+ KA D +K G G
Sbjct: 25 EEHKKKNPEVPVNFAEFSKKCSERWKTMSGKEKSKF-DEMAKADKVRYDREMKDYGPAKG 83
Query: 533 KKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPF 354
K KDPN PKRPPS FF+F FR + NP S+G V K G W ++ D +K P+
Sbjct: 84 GKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDVAKKLGEMWNNLNDSEKQPY 142
Query: 353 VAKAETKKSEYTKTMQKYNMK----LANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
+ KA K +Y K + Y K A G + ++ E E EEEE++D
Sbjct: 143 ITKAAKLKEKYEKDVADYKSKGKFDGAKGPAKVARKKVEEEDEEEEEEEEEEEEEED 199
>sp|P40618|HMGB3_CHICK High mobility group protein B3 OS=Gallus gallus GN=HMGB3
PE=2 SV=2
Length = 202
Score = 87 bits (214), Expect = 1e-016
Identities = 53/137 (38%), Positives = 68/137 (49%), Gaps = 6/137 (4%)
Frame = -2
Query: 590 KAQAKGTDDRLKTRGKKAGKKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANPDNKSVGAV 411
KA D +K G G K KDPN PKRPPSAFF+F FR + NP S+G V
Sbjct: 65 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSAFFLFCSEFRPKIKSTNP-GISIGDV 123
Query: 410 GKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMK----LANGTST-AGDDDSDK 246
K G W +++D +K P+ KA K +Y K + Y K A G +T A ++
Sbjct: 124 AKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEE 183
Query: 245 SKSEVNEGASEEEEDDD 195
E E EE+EDDD
Sbjct: 184 EDEEEEEDEEEEDEDDD 200
>sp|P36194|HMGB1_CHICK High mobility group protein B1 OS=Gallus gallus GN=HMGB1
PE=2 SV=2
Length = 201
Score = 86 bits (210), Expect = 3e-016
Identities = 52/137 (37%), Positives = 67/137 (48%), Gaps = 6/137 (4%)
Frame = -2
Query: 590 KAQAKGTDDRLKTRGKKAGKKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANPDNKSVGAV 411
KA D +K G G K KDPN PKRPPS FF+F FR + NP S+G V
Sbjct: 64 KADKVRYDREMKDYGPAKGGKKKKDPNAPKRPPSGFFLFCSEFRPKIKSTNP-GISIGDV 122
Query: 410 GKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMK----LANGTST-AGDDDSDK 246
K G W +++D +K P+ KA K +Y K + Y K A G +T A ++
Sbjct: 123 AKKLGEMWNNLSDGEKQPYNNKAAKLKEKYEKDVADYKSKGKFDGAKGAATKAARKKVEE 182
Query: 245 SKSEVNEGASEEEEDDD 195
E E EE+EDDD
Sbjct: 183 EDEEEEEDEEEEDEDDD 199
>sp|P26584|HMGB2_CHICK High mobility group protein B2 OS=Gallus gallus GN=HMGB2
PE=2 SV=2
Length = 207
Score = 82 bits (201), Expect = 3e-015
Identities = 58/177 (32%), Positives = 83/177 (46%), Gaps = 16/177 (9%)
Frame = -2
Query: 689 EKEKKKSESSSL----WSK*KKTLTFTDLSEMKGGETKAQAKGTDDR--------LKTRG 546
E+ KKK SS+ +S+ K + + +S + G+ + AKG R + +G
Sbjct: 25 EEHKKKHPDSSVNFAEFSR-KCSERWKTMSSKEKGKFEEMAKGDKARYDREMKNYVPPKG 83
Query: 545 KKAGKKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDED 366
+K GKK KDPN PKRPPSAFF+F R + +P S+G K G W +D
Sbjct: 84 EKKGKK--KDPNAPKRPPSAFFLFCSEHRPKIKNDHP-GLSIGDTAKKLGEMWSEQLAKD 140
Query: 365 KAPFVAKAETKKSEYTKTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K P+ KA K +Y K + Y K + G SK + EEEE+D+
Sbjct: 141 KQPYEQKAAKLKEKYEKDIAAYRAKSKSDAGKKGPGRPAGSKKKAEPEEEEEEEEDE 197
>sp|P10103|HMGB1_BOVIN High mobility group protein B1 OS=Bos taurus GN=HMGB1
PE=1 SV=3
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|B0CM99|HMGB1_CALJA High mobility group protein B1 OS=Callithrix jacchus
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|B1MTB0|HMGB1_CALMO High mobility group protein B1 OS=Callicebus moloch
GN=HMGB1 PE=3 SV=1
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|Q6YKA4|HMGB1_CANFA High mobility group protein B1 OS=Canis familiaris
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|Q08IE6|HMGB1_HORSE High mobility group protein B1 OS=Equus caballus GN=HMGB1
PE=2 SV=3
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|P09429|HMGB1_HUMAN High mobility group protein B1 OS=Homo sapiens GN=HMGB1
PE=1 SV=3
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|Q4R844|HMGB1_MACFA High mobility group protein B1 OS=Macaca fascicularis
GN=HMGB1 PE=2 SV=3
Length = 215
Score = 81 bits (199), Expect = 5e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 39 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 97
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 98 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 156
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 157 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEEDEEDEEDE 197
>sp|P07156|HMGB1_CRIGR High mobility group protein B1 (Fragment) OS=Cricetulus
griseus GN=HMGB1 PE=1 SV=1
Length = 180
Score = 81 bits (198), Expect = 7e-015
Identities = 54/161 (33%), Positives = 79/161 (49%), Gaps = 4/161 (2%)
Frame = -2
Query: 671 SESSSLWSK*KKTLTFTDLSEMKGGETKAQAKGTDDRLKTRGKKAG--KKAAKDPNKPKR 498
SE S S+ KT++ + + + KA + +KT G KK KDPN PKR
Sbjct: 4 SEFSKKCSERWKTMSAKEKGKFE-DMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKR 62
Query: 497 PPSAFFVFLEGFRKEFNLANPDNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYT 318
PPSAFF+F +R + +P S+G V K G W + +DK P+ KA K +Y
Sbjct: 63 PPSAFFLFCSEYRPKIKGEHP-GLSIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYE 121
Query: 317 KTMQKYNMKLANGTSTAGDDDSDKSKSEVNEGASEEEEDDD 195
K + Y K + G ++KSK + E EE+E+D+
Sbjct: 122 KDIAAYRAKGKPDAAKKGVVKAEKSKKKKEEEDDEEDEEDE 162
>sp|P41848|SSP1A_CAEEL FACT complex subunit SSRP1-A OS=Caenorhabditis elegans
GN=hmg-4 PE=2 SV=1
Length = 697
Score = 78 bits (190), Expect = 6e-014
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 8/136 (5%)
Frame = -2
Query: 614 SEMKGGETKAQAKGTDDRLKTRGKKAGKKAAKDPNKPKRPPSAFFVFLEGFRKEFNLANP 435
S+ + GE K + + + R K GKK GKK KDPN PKR SA +++ F N
Sbjct: 522 SKRRKGEPKEKREKKEKREKKEGKK-GKK-DKDPNAPKRATSA---YMQWFLASRNELKE 576
Query: 434 DNKSVGAVGKAAGAKWKSMTDEDKAPFVAKAETKKSEYTKTMQKYNMKLANGTSTAGDDD 255
D SV V K GAKWK+M+ +DK + KAE KS Y K M++Y NG ++
Sbjct: 577 DGDSVADVAKKGGAKWKTMSSDDKKKWEEKAEEDKSRYEKEMKEYR---KNGPPSSSSKP 633
Query: 254 SDKSKSEVNEGASEEE 207
S S+ + G S +
Sbjct: 634 SSSKTSKKSSGPSSSK 649
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,801,685,782
Number of Sequences: 518415
Number of Extensions: 36801685782
Number of Successful Extensions: 258262551
Number of sequences better than 0.0: 0
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