BLASTX 7.6.2

Query= UN08843 /QuerySize=684
        (683 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT2G47640.1 | Symbols:  | small nuclear ribonucle...    220   6e-058
TAIR9_protein||AT2G47640.4 | Symbols:  | small nuclear ribonucle...    220   6e-058
TAIR9_protein||AT3G62840.1 | Symbols:  | FUNCTIONS IN: molecular...    220   6e-058
TAIR9_protein||AT2G47640.2 | Symbols:  | small nuclear ribonucle...    214   6e-056
TAIR9_protein||AT2G47640.3 | Symbols:  | small nuclear ribonucle...    214   6e-056
TAIR9_protein||AT3G62840.2 | Symbols:  | FUNCTIONS IN: molecular...    214   6e-056

>TAIR9_protein||AT2G47640.1 | Symbols:  | small nuclear ribonucleoprotein D2,
        putative / snRNP core protein D2, putative / Sm protein D2, putative |
        chr2:19537393-19538431 FORWARD

          Length = 110

 Score =  220 bits (560), Expect = 6e-058
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = +3

Query: 117 SRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 296
           S+PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV
Sbjct:   2 SKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 61

Query: 297 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 443
           LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*
Sbjct:  62 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 110

>TAIR9_protein||AT2G47640.4 | Symbols:  | small nuclear ribonucleoprotein D2,
        putative / snRNP core protein D2, putative / Sm protein D2, putative |
        chr2:19537393-19538431 FORWARD

          Length = 110

 Score =  220 bits (560), Expect = 6e-058
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = +3

Query: 117 SRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 296
           S+PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV
Sbjct:   2 SKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 61

Query: 297 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 443
           LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*
Sbjct:  62 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 110

>TAIR9_protein||AT3G62840.1 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; LOCATED IN: small nucleolar ribonucleoprotein complex,
        nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth
        stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein, core
        (InterPro:IPR001163), Like-Sm ribonucleoprotein, eukaryotic and
        archaea-type, core (InterPro:IPR006649), Like-Sm
        ribonucleoprotein-related, core (InterPro:IPR010920); BEST Arabidopsis
        thaliana protein match is: small nuclear ribonucleoprotein D2, putative
        / snRNP core protein D2, putative / Sm protein D2, putative
        (TAIR:AT2G47640.4); Has 535 Blast hits to 535 proteins in 164 species:
        Archae - 2; Bacteria - 0; Metazoa - 239; Fungi - 109; Plants - 78;
        Viruses - 0; Other Eukaryotes - 107 (source: NCBI BLink). |
        chr3:23235727-23236615 REVERSE

          Length = 110

 Score =  220 bits (560), Expect = 6e-058
 Identities = 107/109 (98%), Positives = 108/109 (99%)
 Frame = +3

Query: 117 SRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 296
           S+PMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV
Sbjct:   2 SKPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 61

Query: 297 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 443
           LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*
Sbjct:  62 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 110

>TAIR9_protein||AT2G47640.2 | Symbols:  | small nuclear ribonucleoprotein D2,
        putative / snRNP core protein D2, putative / Sm protein D2, putative |
        chr2:19537393-19538431 FORWARD

          Length = 109

 Score =  214 bits (543), Expect = 6e-056
 Identities = 106/109 (97%), Positives = 107/109 (98%), Gaps = 1/109 (0%)
 Frame = +3

Query: 117 SRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 296
           S+PMEEDTN GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV
Sbjct:   2 SKPMEEDTN-GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 60

Query: 297 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 443
           LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*
Sbjct:  61 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 109

>TAIR9_protein||AT2G47640.3 | Symbols:  | small nuclear ribonucleoprotein D2,
        putative / snRNP core protein D2, putative / Sm protein D2, putative |
        chr2:19537393-19538431 FORWARD

          Length = 109

 Score =  214 bits (543), Expect = 6e-056
 Identities = 106/109 (97%), Positives = 107/109 (98%), Gaps = 1/109 (0%)
 Frame = +3

Query: 117 SRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 296
           S+PMEEDTN GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV
Sbjct:   2 SKPMEEDTN-GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 60

Query: 297 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 443
           LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*
Sbjct:  61 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 109

>TAIR9_protein||AT3G62840.2 | Symbols:  | FUNCTIONS IN: molecular_function
        unknown; LOCATED IN: small nucleolar ribonucleoprotein complex,
        nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth
        stages; CONTAINS InterPro DOMAIN/s: Like-Sm ribonucleoprotein, core
        (InterPro:IPR001163), Like-Sm ribonucleoprotein, eukaryotic and
        archaea-type, core (InterPro:IPR006649), Like-Sm
        ribonucleoprotein-related, core (InterPro:IPR010920); BEST Arabidopsis
        thaliana protein match is: small nuclear ribonucleoprotein D2, putative
        / snRNP core protein D2, putative / Sm protein D2, putative
        (TAIR:AT2G47640.3); Has 537 Blast hits to 537 proteins in 165 species:
        Archae - 2; Bacteria - 0; Metazoa - 239; Fungi - 109; Plants - 78;
        Viruses - 0; Other Eukaryotes - 109 (source: NCBI BLink). |
        chr3:23235727-23236615 REVERSE

          Length = 109

 Score =  214 bits (543), Expect = 6e-056
 Identities = 106/109 (97%), Positives = 107/109 (98%), Gaps = 1/109 (0%)
 Frame = +3

Query: 117 SRPMEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 296
           S+PMEEDTN GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV
Sbjct:   2 SKPMEEDTN-GKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHCNMV 60

Query: 297 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 443
           LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK*
Sbjct:  61 LENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK* 109

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,033,652,294
Number of Sequences: 33410
Number of Extensions: 5033652294
Number of Successful Extensions: 189595926
Number of sequences better than 0.0: 0