BLASTX 7.6.2
Query= UN08892 /QuerySize=843
(842 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast... 307 5e-084
TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast... 155 3e-038
TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein | chr1:... 139 3e-033
TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:... 84 1e-016
TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein | chr1:... 56 2e-008
>TAIR9_protein||AT5G32440.1 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G80040.1); Has 303 Blast hits to 289 proteins in 67 species:
Archae - 0; Bacteria - 2; Metazoa - 74; Fungi - 21; Plants - 93;
Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink). |
chr5:12077014-12078396 FORWARD
Length = 265
Score = 307 bits (786), Expect = 5e-084
Identities = 171/216 (79%), Positives = 183/216 (84%), Gaps = 16/216 (7%)
Frame = -3
Query: 840 DMDHQILERAIEECGDDIDSAIRCLNQLRLESTNKNSESS------IQEEAKVEAPQQQQ 679
DMD QILERAIEECGDD+DSAIRCLNQLRLES NKNS+S+ + +E VE PQQQ
Sbjct: 58 DMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVE-PQQQG 116
Query: 678 QGKEE--VLNMDGAEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARAGGADAAAA 505
KEE VLN+DG EWV+LFVREMMNASDMKDAK RAARALEALEKSI AR G DA
Sbjct: 117 SAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINART-GTDA--- 172
Query: 504 AQSSSLQQENSMLRQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQE 325
+LQQEN ML+QQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQ+VTQYQE
Sbjct: 173 --MQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQLVTQYQE 230
Query: 324 QLRTLEVNNYALTLHLKQAQQNNGSIPGRFHPDVF* 217
QLRTLEVNNYALTLHLKQAQQN+ SIPGR+HPDVF*
Sbjct: 231 QLRTLEVNNYALTLHLKQAQQNS-SIPGRYHPDVF* 265
>TAIR9_protein||AT5G32440.2 | Symbols: | LOCATED IN: chloroplast; EXPRESSED IN:
24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS
InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892);
Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria -
0; Metazoa - 1; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr5:12077014-12078091 FORWARD
Length = 188
Score = 155 bits (391), Expect = 3e-038
Identities = 89/129 (68%), Positives = 98/129 (75%), Gaps = 10/129 (7%)
Frame = -3
Query: 840 DMDHQILERAIEECGDDIDSAIRCLNQLRLESTNKNSESS------IQEEAKVEAPQQQQ 679
DMD QILERAIEECGDD+DSAIRCLNQLRLES NKNS+S+ + +E VE PQQQ
Sbjct: 58 DMDKQILERAIEECGDDLDSAIRCLNQLRLESANKNSDSATNQSPVVIQEPNVE-PQQQG 116
Query: 678 QGKEE--VLNMDGAEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARAGGADAAAA 505
KEE VLN+DG EWV+LFVREMMNASDMKDAK RAARALEALEKSI AR G DA
Sbjct: 117 SAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEALEKSINART-GTDAMQN 175
Query: 504 AQSSSLQQE 478
Q L ++
Sbjct: 176 LQQKLLYRK 184
>TAIR9_protein||AT1G80040.1 | Symbols: | unknown protein |
chr1:30109447-30111051 REVERSE
Length = 249
Score = 139 bits (348), Expect = 3e-033
Identities = 82/202 (40%), Positives = 120/202 (59%), Gaps = 11/202 (5%)
Frame = -3
Query: 825 ILERAIEECGDDIDSAIRCLNQLRLESTNKNSESSIQEEAKVEAPQQQQQGKEEVLNMDG 646
+L +A+E+ G D ++A++ L S K +E A + G G
Sbjct: 58 VLVKALEDNGSDFNAAMKSLYSF-ASSEEKKAEELAAGGAATQETDAVCGGNPPT---SG 113
Query: 645 AEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARAGGADAAAAAQSSSLQQENSML 466
+WV+L VRE++ +S DAK RAAR LEALEK + AR A + Q+E +
Sbjct: 114 DDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSAR------AREEAGNKFQEEKVAV 167
Query: 465 RQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQEQLRTLEVNNYALT 286
+QQ+E +V++N++LKRAV Q +RQ+ ED + +L L+Q+V QYQE+LR LEVNNYAL
Sbjct: 168 QQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLEVNNYALR 227
Query: 285 LHLKQAQQNNGSIPGRFHPDVF 220
+ L+Q + N S+P RF+PDVF
Sbjct: 228 MQLQQVEHGN-SMPARFNPDVF 248
>TAIR9_protein||AT5G02510.1 | Symbols: | unknown protein | chr5:560135-560860
FORWARD
Length = 180
Score = 84 bits (206), Expect = 1e-016
Identities = 34/94 (36%), Positives = 66/94 (70%)
Frame = -3
Query: 498 SSSLQQENSMLRQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQHLRQMVTQYQEQL 319
++S + E + +++ L++++ +N +LKR + Q +R E+E++++++ HLR +V QYQEQ+
Sbjct: 87 NASKKLEYASMKESLQSLINDNQILKRVIANQHQRSSENEEKAKQVLHLRGVVGQYQEQV 146
Query: 318 RTLEVNNYALTLHLKQAQQNNGSIPGRFHPDVF* 217
LE++NYA+ LHL+++QQ S G PD++*
Sbjct: 147 HKLELSNYAMKLHLQRSQQQQTSFSGNLPPDIY* 180
>TAIR9_protein||AT1G80040.2 | Symbols: | unknown protein |
chr1:30110059-30111051 REVERSE
Length = 181
Score = 56 bits (134), Expect = 2e-008
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 4/99 (4%)
Frame = -3
Query: 825 ILERAIEECGDDIDSAIRCLNQLRLESTNKNSESSIQEEAKVEAPQQQQQGKEEVLNMDG 646
+L +A+E+ G D ++A++ L S K +E A + G G
Sbjct: 58 VLVKALEDNGSDFNAAMKSLYSF-ASSEEKKAEELAAGGAATQETDAVCGGNPPT---SG 113
Query: 645 AEWVDLFVREMMNASDMKDAKDRAARALEALEKSIKARA 529
+WV+L VRE++ +S DAK RAAR LEALEK + ARA
Sbjct: 114 DDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARA 152
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,033,652,294
Number of Sequences: 33410
Number of Extensions: 5033652294
Number of Successful Extensions: 189595926
Number of sequences better than 0.0: 0
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