BLASTX 7.6.2
Query= UN09004 /QuerySize=578
(577 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G11475.1 | Symbols: NRPB10, NRPD10, NRPE10 | N... 148 4e-036
TAIR9_protein||AT1G61700.1 | Symbols: | DNA-directed RNA polyme... 137 5e-033
>TAIR9_protein||AT1G11475.1 | Symbols: NRPB10, NRPD10, NRPE10 | NRPB10; DNA
binding / DNA-directed RNA polymerase | chr1:3862520-3863805 FORWARD
Length = 72
Score = 148 bits (371), Expect = 4e-036
Identities = 69/72 (95%)
Frame = +3
Query: 120 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 299
MIIPVRCFTCGKVIGNKWD YLDLLQLDYTEGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIIPVRCFTCGKVIGNKWDQYLDLLQLDYTEGDALDALQLVRYCCRRMLMTHVDLIEKLL 60
Query: 300 NYNTLEKSDNS* 335
NYNTLEKSDNS*
Sbjct: 61 NYNTLEKSDNS* 72
>TAIR9_protein||AT1G61700.1 | Symbols: | DNA-directed RNA polymerase II,
putative (RPB10) | chr1:22787105-22788112 FORWARD
Length = 72
Score = 137 bits (344), Expect = 5e-033
Identities = 62/69 (89%), Positives = 65/69 (94%)
Frame = +3
Query: 120 MIIPVRCFTCGKVIGNKWDAYLDLLQLDYTEGDALDALNLVRYCCRRMLMTHVDLIEKLL 299
MI+PVRCFTCGKVIGNKWD YL+LLQ DY EGDALDAL LVRYCCRRMLMTHVDLIEKLL
Sbjct: 1 MIVPVRCFTCGKVIGNKWDTYLELLQADYAEGDALDALGLVRYCCRRMLMTHVDLIEKLL 60
Query: 300 NYNTLEKSD 326
NYNT+EKSD
Sbjct: 61 NYNTMEKSD 69
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,125,628,435
Number of Sequences: 33410
Number of Extensions: 5125628435
Number of Successful Extensions: 194969585
Number of sequences better than 0.0: 0
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