BLASTX 7.6.2
Query= UN09062 /QuerySize=861
(860 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 311 4e-085
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 311 4e-085
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 304 5e-083
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 151 9e-037
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 150 1e-036
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 150 1e-036
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 3e-036
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 149 3e-036
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 122 3e-028
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 3e-027
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 119 3e-027
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 118 5e-027
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 110 1e-024
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 97 2e-020
TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 93 2e-019
TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-rel... 65 4e-011
TAIR9_protein||AT2G11910.1 | Symbols: | unknown protein | chr2:... 59 5e-009
TAIR9_protein||AT2G11910.2 | Symbols: | unknown protein | chr2:... 59 5e-009
TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:... 57 1e-008
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 311 bits (796), Expect = 4e-085
Identities = 151/178 (84%), Positives = 168/178 (94%)
Frame = +1
Query: 97 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAF 276
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETRKEKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 277 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 456
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 457 YNKSMEEGSDESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDDDEDDDDEDDED 630
YNK++EEGSDESE S SE+NDEDEAS EEE +EK AG+D+E+++++D+DDDD+++ED
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 311 bits (796), Expect = 4e-085
Identities = 151/178 (84%), Positives = 168/178 (94%)
Frame = +1
Query: 97 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAF 276
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETRKEKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 277 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 456
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 457 YNKSMEEGSDESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDDDEDDDDEDDED 630
YNK++EEGSDESE S SE+NDEDEAS EEE +EK AG+D+E+++++D+DDDD+++ED
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEEELLEKEAAGDDEEEEEEEDDDDDDDEEED 178
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 304 bits (778), Expect = 5e-083
Identities = 151/185 (81%), Positives = 168/185 (90%), Gaps = 7/185 (3%)
Frame = +1
Query: 97 MKTAKGKGKAKTTKEALKPVDDRKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAF 276
MKTAKGK K KTTKEALKPVDDRKVGKRKAPAEKP+KRETRKEKKAKKDPNKPKRAPSAF
Sbjct: 1 MKTAKGKDKVKTTKEALKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAF 60
Query: 277 FVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDA 456
FVFLEDFR TFKKENP+VKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEK MDA
Sbjct: 61 FVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDA 120
Query: 457 YNKSMEEGSDESENSLSEVNDEDEASEE-------EEKVEKGKAGEDDEDDDDDDEDDDD 615
YNK++EEGSDESE S SE+NDEDEAS E EE +EK AG+D+E+++++D+DDDD
Sbjct: 121 YNKNLEEGSDESEKSRSEINDEDEASGEVTIPLSNEELLEKEAAGDDEEEEEEEDDDDDD 180
Query: 616 EDDED 630
+++ED
Sbjct: 181 DEEED 185
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 151 bits (379), Expect = 9e-037
Identities = 74/122 (60%), Positives = 94/122 (77%), Gaps = 3/122 (2%)
Frame = +1
Query: 202 SKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 381
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 382 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEASEEEEKV 552
S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S+SEVNDED+A + E+V
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEV 137
Query: 553 EK 558
+
Sbjct: 138 RR 139
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 150 bits (378), Expect = 1e-036
Identities = 80/124 (64%), Positives = 94/124 (75%), Gaps = 7/124 (5%)
Frame = +1
Query: 193 EKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 372
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAKGAGR-GKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 373 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---S 534
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A S
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 535 EEEE 546
EEEE
Sbjct: 138 EEEE 141
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 150 bits (377), Expect = 1e-036
Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 6/121 (4%)
Frame = +1
Query: 202 SKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 381
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 382 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---SEEE 543
S +EKAPY KA KRK EYEK M AYNK +EEG +ES+ S+SEVNDED+A SEEE
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGSEEE 137
Query: 544 E 546
E
Sbjct: 138 E 138
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 149 bits (375), Expect = 3e-036
Identities = 79/124 (63%), Positives = 94/124 (75%), Gaps = 7/124 (5%)
Frame = +1
Query: 193 EKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 372
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAKGAGR-GKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 373 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEA---S 534
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A S
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 535 EEEE 546
EEE+
Sbjct: 138 EEED 141
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 149 bits (374), Expect = 3e-036
Identities = 76/122 (62%), Positives = 92/122 (75%), Gaps = 4/122 (3%)
Frame = +1
Query: 193 EKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKW 372
+KP+K R K A KDPNKPKR SAFFVF+EDFR+TFKKENP K+V+ VGKA G KW
Sbjct: 19 KKPAKGAGR-GKAAAKDPNKPKRPASAFFVFMEDFRETFKKENPKNKSVATVGKAAGDKW 77
Query: 373 KSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEG---SDESENSLSEVNDEDEASEEE 543
KS+S +EKAPY KA KRK EYEK + AYNK +EEG +ES+ S+SEVNDED+A +
Sbjct: 78 KSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEESDKSVSEVNDEDDAEDGS 137
Query: 544 EK 549
E+
Sbjct: 138 EE 139
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 122 bits (305), Expect = 3e-028
Identities = 58/90 (64%), Positives = 71/90 (78%)
Frame = +1
Query: 202 SKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSM 381
+K+ + K A KDPNKPKR SAFFVF+EDFR T+K+E+P K+V+AVGKAGG+KWKS+
Sbjct: 18 TKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSL 77
Query: 382 SQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 471
S +EKAPY KA KRK EYEK M AYNK +
Sbjct: 78 SDSEKAPYVAKADKRKVEYEKNMKAYNKKL 107
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 119 bits (297), Expect = 3e-027
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Frame = +1
Query: 166 KVGKRKAPAEKPSKR-ETRKE---KKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 333
K G+ KA A +R +TR KK KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 334 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 501
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 502 LSEVNDEDEASEEEE 546
SEV DEA EEE
Sbjct: 122 KSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 119 bits (297), Expect = 3e-027
Identities = 69/135 (51%), Positives = 86/135 (63%), Gaps = 11/135 (8%)
Frame = +1
Query: 166 KVGKRKAPAEKPSKR-ETRKE---KKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 333
K G+ KA A +R +TR KK KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 334 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 501
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 502 LSEVNDEDEASEEEE 546
SEV DEA EEE
Sbjct: 122 KSEV---DEAVSEEE 133
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 118 bits (295), Expect = 5e-027
Identities = 67/134 (50%), Positives = 87/134 (64%), Gaps = 9/134 (6%)
Frame = +1
Query: 166 KVGKRKAPAEKPSKR-ETRKE---KKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVK 333
K G+ KA A +R +TR KK KKDPN+PKR PSAFFVFLEDFR+ F NP+ K
Sbjct: 2 KGGESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNK 61
Query: 334 AVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS----DESENS 501
+V+ VGKA G +WK+M+ +KAPY KA RK EY K + YN + G+ D+S+ S
Sbjct: 62 SVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASGTNREEDDSDKS 121
Query: 502 LSEVNDEDEASEEE 543
SEV DE EA +++
Sbjct: 122 KSEV-DEAEAEDDD 134
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 110 bits (274), Expect = 1e-024
Identities = 69/172 (40%), Positives = 104/172 (60%), Gaps = 11/172 (6%)
Frame = +1
Query: 127 KTTKEALKPVDDRKVGKRKAPAEKPSK-RETRKEKKAKKDPNKPKRAPSAFFVFLEDFRQ 303
+T EA K ++K K + KP + ++T EKK+ NKPKR +AFF+F+ DFR+
Sbjct: 74 ETQAEAKKKPAEKK--KTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLTAFFIFMSDFRK 131
Query: 304 TFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSMEEGS 483
TFK E+ A A K GG+KWKS+++ EK Y +KAA+ KAEY K +++ N + EE
Sbjct: 132 TFKSEHNGSLAKDA-AKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLES-NDADEEEE 189
Query: 484 DESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDDDEDDDDEDDEDEEE 639
DE + S +D D+A EE++V+ E+ E ++ DD+ + E E+EEE
Sbjct: 190 DEEKQS----DDVDDA--EEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEE 235
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 97 bits (239), Expect = 2e-020
Identities = 43/88 (48%), Positives = 59/88 (67%)
Frame = +1
Query: 220 KEKKAKKDPNKPKRAPSAFFVFLEDFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKA 399
K K KDPN+PK+ PS FFVFL+DFR+ F NPD K+V VG+A G+KWK+M++ E+A
Sbjct: 23 KVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERA 82
Query: 400 PYEEKAAKRKAEYEKLMDAYNKSMEEGS 483
P+ K+ +K EY M YN + G+
Sbjct: 83 PFVAKSQSKKTEYAVTMQQYNMELANGN 110
>TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 152
Score = 93 bits (229), Expect = 2e-019
Identities = 49/129 (37%), Positives = 77/129 (59%), Gaps = 5/129 (3%)
Frame = +1
Query: 118 GKAKTTKEALKPVDD--RKVGKRKAPAEKPSKRETRKEKKAKKDPNKPKRAPSAFFVFLE 291
G ++ + A+K + R R P KP + + K+K K PK+ +AFF FL+
Sbjct: 18 GSSRNLELAVKSSEGARRSTRLRLQPLRKP--KTSPKKKPVKLQTKMPKKPATAFFFFLD 75
Query: 292 DFRQTFKKENPDVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKLMDAYNKSM 471
DFR+ +++ENPDVK++ +GK G+KWK+M+ EK Y + A +++ E+ + M Y K M
Sbjct: 76 DFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRM 135
Query: 472 EEGS-DESE 495
E G+ DESE
Sbjct: 136 ESGAHDESE 144
>TAIR9_protein||AT5G63740.1 | Symbols: | zinc finger protein-related |
chr5:25510776-25511456 REVERSE
Length = 227
Score = 65 bits (158), Expect = 4e-011
Identities = 34/98 (34%), Positives = 54/98 (55%), Gaps = 10/98 (10%)
Frame = +1
Query: 433 EYEKLMDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDDD---- 600
EY K+ D +N EG + + E DED ++E+E ++ + +DD+DDDDDD
Sbjct: 47 EYIKVYDDHNND-GEGDGDGDGDGDEDEDEDADADEDEDEDEDEDDDDDDDDDDDDDADD 105
Query: 601 -----EDDDDEDDEDEEED*TGDRDQSLDLEDNYRFRR 699
+DDD++DDEDE++D D + + +D Y R
Sbjct: 106 ADDDEDDDDEDDDEDEDDDDDDDDENDEECDDEYDSHR 143
>TAIR9_protein||AT2G11910.1 | Symbols: | unknown protein | chr2:4805862-4807164
REVERSE
Length = 169
Score = 59 bits (140), Expect = 5e-009
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +1
Query: 472 EEGSDESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDD--DEDDDDEDDEDEEED 642
++ +DE + E+EA E++ V G G DDEDDDD+ D DD+DED+EDEEED
Sbjct: 92 DDANDEDFSGGEGDEGEEEADPEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEEED 150
>TAIR9_protein||AT2G11910.2 | Symbols: | unknown protein | chr2:4805862-4807164
REVERSE
Length = 169
Score = 59 bits (140), Expect = 5e-009
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 2/59 (3%)
Frame = +1
Query: 472 EEGSDESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDD--DEDDDDEDDEDEEED 642
++ +DE + E+EA E++ V G G DDEDDDD+ D DD+DED+EDEEED
Sbjct: 92 DDANDEDFSGGEGDEGEEEADPEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEEED 150
>TAIR9_protein||AT5G03710.1 | Symbols: | unknown protein | chr5:971107-971627
FORWARD
Length = 82
Score = 57 bits (136), Expect = 1e-008
Identities = 22/72 (30%), Positives = 50/72 (69%)
Frame = +1
Query: 448 MDAYNKSMEEGSDESENSLSEVNDEDEASEEEEKVEKGKAGEDDEDDDDDDEDDDDEDDE 627
M+ + + EE +E E E +E+E EEEE+ E+ + E++E++++++E++++E++E
Sbjct: 1 MEFWGEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 60
Query: 628 DEEED*TGDRDQ 663
+EEE+ +R++
Sbjct: 61 EEEEEEDREREE 72
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,125,628,435
Number of Sequences: 33410
Number of Extensions: 5125628435
Number of Successful Extensions: 194969585
Number of sequences better than 0.0: 0
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