BLASTX 7.6.2
Query= UN09104 /QuerySize=619
(618 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G03870.2 | Symbols: | small nuclear ribonucle... 184 4e-047
TAIR9_protein||AT2G03870.1 | Symbols: | small nuclear ribonucle... 184 4e-047
TAIR9_protein||AT2G23930.1 | Symbols: SNRNP-G | SNRNP-G (PROBABL... 54 7e-008
TAIR9_protein||AT2G23930.2 | Symbols: SNRNP-G | SNRNP-G (PROBABL... 47 6e-006
>TAIR9_protein||AT2G03870.2 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr2:1180306-1181256 FORWARD
Length = 100
Score = 184 bits (466), Expect = 4e-047
Identities = 94/100 (94%)
Frame = +3
Query: 117 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGAVESVRDHDDPLKT 296
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD AVE VRDHDDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKT 60
Query: 297 TDQTRPLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV* 416
TDQTR LGLIVCRGTAVMLVSPTDGTEEIANPFV EAV*
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVTAEAV* 100
>TAIR9_protein||AT2G03870.1 | Symbols: | small nuclear ribonucleoprotein,
putative / snRNP, putative / Sm protein, putative |
chr2:1180306-1181256 FORWARD
Length = 100
Score = 184 bits (466), Expect = 4e-047
Identities = 94/100 (94%)
Frame = +3
Query: 117 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGAVESVRDHDDPLKT 296
MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLD AVE VRDHDDPLKT
Sbjct: 1 MSGRKETVLDLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDEAVEFVRDHDDPLKT 60
Query: 297 TDQTRPLGLIVCRGTAVMLVSPTDGTEEIANPFVQPEAV* 416
TDQTR LGLIVCRGTAVMLVSPTDGTEEIANPFV EAV*
Sbjct: 61 TDQTRRLGLIVCRGTAVMLVSPTDGTEEIANPFVTAEAV* 100
>TAIR9_protein||AT2G23930.1 | Symbols: SNRNP-G | SNRNP-G (PROBABLE SMALL NUCLEAR
RIBONUCLEOPROTEIN G) | chr2:10182353-10183026 FORWARD
Length = 81
Score = 54 bits (128), Expect = 7e-008
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3
Query: 144 DLAKFVDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGAVE 263
DL K++DK +Q+KL R VTGTL+G+DQ +NLV+D VE
Sbjct: 9 DLKKYMDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE 48
>TAIR9_protein||AT2G23930.2 | Symbols: SNRNP-G | SNRNP-G (PROBABLE SMALL NUCLEAR
RIBONUCLEOPROTEIN G) | chr2:10182496-10183026 FORWARD
Length = 68
Score = 47 bits (111), Expect = 6e-006
Identities = 20/35 (57%), Positives = 27/35 (77%)
Frame = +3
Query: 159 VDKGVQVKLTGGRQVTGTLKGYDQLLNLVLDGAVE 263
+DK +Q+KL R VTGTL+G+DQ +NLV+D VE
Sbjct: 1 MDKKLQIKLNANRMVTGTLRGFDQFMNLVVDNTVE 35
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,146,786,476
Number of Sequences: 33410
Number of Extensions: 5146786476
Number of Successful Extensions: 194998838
Number of sequences better than 0.0: 0
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