BLASTX 7.6.2
Query= UN09232 /QuerySize=1001
(1000 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23... 472 2e-133
TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosyst... 410 1e-114
TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSB... 348 4e-096
>TAIR9_protein||AT1G06680.1 | Symbols: PSBP-1, OEE2, PSII-P, OE23 | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2047940-2049186
FORWARD
Length = 264
Score = 472 bits (1213), Expect = 2e-133
Identities = 241/266 (90%), Positives = 253/266 (95%), Gaps = 5/266 (1%)
Frame = -2
Query: 942 MAYSSACFLHQSALASSAARSSSPSSSSQRYVSLSK---LVCKAQQTHENDTSAVSRRLA 772
MAY SACFLHQSALASSAARSSS SSSSQR+VSLSK ++CKAQQ+HE+D SAVSRRLA
Sbjct: 1 MAY-SACFLHQSALASSAARSSS-SSSSQRHVSLSKPVQIICKAQQSHEDDNSAVSRRLA 58
Query: 771 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKQNTDFTAYSGDGFQVQVPAKWNPSREVE 592
LTLLVGAAAVGSKVSPADAAYGEAANVFGKPK NTDF Y+GDGF+VQVPAKWNPS+E+E
Sbjct: 59 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIE 118
Query: 591 YPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEG 412
YPGQVLR+EDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEG
Sbjct: 119 YPGQVLRFEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEG 178
Query: 411 GFDNNAVATANILETNIQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKA 232
GFDNNAVATANILE++ QEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKA
Sbjct: 179 GFDNNAVATANILESSSQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKA 238
Query: 231 QAGDKRWFKGANKFVEKAATSFSVA* 154
QAGDKRWFKGA KFVE AATSFSVA*
Sbjct: 239 QAGDKRWFKGARKFVESAATSFSVA* 264
>TAIR9_protein||AT2G30790.1 | Symbols: PSBP-2 | PSBP-2 (photosystem II subunit
P-2); calcium ion binding | chr2:13119047-13120090 REVERSE
Length = 262
Score = 410 bits (1052), Expect = 1e-114
Identities = 210/266 (78%), Positives = 234/266 (87%), Gaps = 7/266 (2%)
Frame = -2
Query: 942 MAYSSACFLHQSALASSAARSSSPSSSSQRYVSLSK---LVCKAQQTHENDTSAVSRRLA 772
MAYS + FLHQSALASSA RSSS SSSS R+VSLS+ LVC+AQQ+ EN+ SAV RRLA
Sbjct: 1 MAYSPS-FLHQSALASSAGRSSSSSSSSFRHVSLSRPVHLVCRAQQSQENNNSAVFRRLA 59
Query: 771 LTLLVGAAAVGSKVSPADAAYGEAANVFGKPKQNTDFTAYSGDGFQVQVPAKWNPSREVE 592
LTLLVGAAA+GSKVSPA + PK+NTDF Y+G+GF++Q+P+KWNPS+E+E
Sbjct: 60 LTLLVGAAAIGSKVSPAPPM---VKPLMCLPKKNTDFLPYTGEGFKIQIPSKWNPSKEIE 116
Query: 591 YPGQVLRYEDNFDATSNLNVMVTPTDKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEG 412
YPGQVLR+EDNFDATSN++VM+TPTDKKSITDYGSPE+FLSQVNYLLGKQAY GETASEG
Sbjct: 117 YPGQVLRFEDNFDATSNVSVMITPTDKKSITDYGSPEQFLSQVNYLLGKQAYVGETASEG 176
Query: 411 GFDNNAVATANILETNIQEVGGKPYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKA 232
GFD NAVATANILET+ QE+GGK YYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKA
Sbjct: 177 GFDANAVATANILETSTQEIGGKEYYYLSVLTRTADGDEGGKHQLITATVNGGKLYICKA 236
Query: 231 QAGDKRWFKGANKFVEKAATSFSVA* 154
QAGDKRWFKGA KFVE AATSFSVA*
Sbjct: 237 QAGDKRWFKGARKFVENAATSFSVA* 262
>TAIR9_protein||AT1G06680.2 | Symbols: PSBP-1, OEE2, PSII-P | PSBP-1
(PHOTOSYSTEM II SUBUNIT P-1); poly(U) binding | chr1:2048076-2049186
FORWARD
Length = 220
Score = 348 bits (892), Expect = 4e-096
Identities = 167/181 (92%), Positives = 174/181 (96%)
Frame = -2
Query: 696 NVFGKPKQNTDFTAYSGDGFQVQVPAKWNPSREVEYPGQVLRYEDNFDATSNLNVMVTPT 517
NVFGKPK NTDF Y+GDGF+VQVPAKWNPS+E+EYPGQVLR+EDNFDATSNLNVMVTPT
Sbjct: 40 NVFGKPKTNTDFLPYNGDGFKVQVPAKWNPSKEIEYPGQVLRFEDNFDATSNLNVMVTPT 99
Query: 516 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILETNIQEVGGKPY 337
DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILE++ QEVGGKPY
Sbjct: 100 DKKSITDYGSPEEFLSQVNYLLGKQAYFGETASEGGFDNNAVATANILESSSQEVGGKPY 159
Query: 336 YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGANKFVEKAATSFSVA 157
YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGA KFVE AATSFSVA
Sbjct: 160 YYLSVLTRTADGDEGGKHQLITATVNGGKLYICKAQAGDKRWFKGARKFVESAATSFSVA 219
Query: 156 * 154
*
Sbjct: 220 * 220
Score = 49 bits (114), Expect = 6e-006
Identities = 30/48 (62%), Positives = 32/48 (66%)
Frame = -3
Query: 806 KTIPPPSLAVSLSHSSSAPLRLVPKCLQPMLPTVKLQMCLGSQSKTQT 663
KTI PPS AV LS SSSAPL LVPK L M PTVKL + + KT T
Sbjct: 2 KTITPPSPAVLLSLSSSAPLLLVPKYLLLMPPTVKLVPNVFGKPKTNT 49
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,169,568,896
Number of Sequences: 33410
Number of Extensions: 5169568896
Number of Successful Extensions: 195030005
Number of sequences better than 0.0: 0
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