BLASTX 7.6.2
Query= UN09255 /QuerySize=1227
(1226 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis l... 462 8e-128
gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis th... 452 6e-125
gi|225446038|ref|XP_002268721.1| PREDICTED: hypothetical protein... 270 4e-070
gi|225429793|ref|XP_002282796.1| PREDICTED: hypothetical protein... 263 5e-068
gi|255634690|gb|ACU17707.1| unknown [Glycine max] 255 1e-065
gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsi... 242 1e-061
gi|224121196|ref|XP_002330767.1| predicted protein [Populus tric... 241 2e-061
gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum] 236 5e-060
gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa su... 210 5e-052
gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis] 203 5e-050
gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT... 201 3e-049
gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis ... 195 1e-047
gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit... 190 6e-046
gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japo... 178 2e-042
gi|222623970|gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryz... 178 2e-042
gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryz... 178 2e-042
gi|194693140|gb|ACF80654.1| unknown [Zea mays] 171 4e-040
gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare ... 170 5e-040
gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT... 168 2e-039
gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidop... 168 3e-039
>gi|297825411|ref|XP_002880588.1| ATRPA2/ROR1/RPA2 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 462 bits (1187), Expect = 8e-128
Identities = 235/280 (83%), Positives = 253/280 (90%), Gaps = 9/280 (3%)
Frame = +1
Query: 55 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTT-KGIVPVTVKQINES-SHSGEK 228
MFS+SQFEPNSAFSGGGFMSSQP+Q YESSSS++ + +G+VPVTVKQI E SGEK
Sbjct: 1 MFSSSQFEPNSAFSGGGFMSSQPSQAYESSSSTAKNREFQGLVPVTVKQITECFQTSGEK 60
Query: 229 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 408
SG+VINGI LTNVSLVGLVCDKDVSKVTEV+FTLDDGTGRIDCKRWVNE+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNETFDAREMESVR 120
Query: 409 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 588
DGTYVR+NGHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+NSESQ GQQVGD
Sbjct: 121 DGTYVRVNGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-GQQVGDV 179
Query: 589 TQSHTV------NANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 750
TQS N NQAT LNPV+ SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATPLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 751 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL 870
EIAQQLKVPKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL
Sbjct: 240 EIAQQLKVPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL 279
>gi|18400560|ref|NP_565571.1| replicon protein A2 [Arabidopsis thaliana]
Length = 279
Score = 452 bits (1162), Expect = 6e-125
Identities = 230/280 (82%), Positives = 250/280 (89%), Gaps = 9/280 (3%)
Frame = +1
Query: 55 MFSNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTT-KGIVPVTVKQINES-SHSGEK 228
MFS+SQFEPNS FSGGGFMSSQP+Q YESSSS++ + +G+VPVTVKQI E SGEK
Sbjct: 1 MFSSSQFEPNSGFSGGGFMSSQPSQAYESSSSTAKNRDFQGLVPVTVKQITECFQSSGEK 60
Query: 229 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 408
SG+VINGI LTNVSLVGLVCDKD SKVTEV+FTLDDGTGRIDCKRWV+E+FDAREMESV+
Sbjct: 61 SGLVINGISLTNVSLVGLVCDKDESKVTEVRFTLDDGTGRIDCKRWVSETFDAREMESVR 120
Query: 409 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 588
DGTYVRL+GHLKTFQG QLLVFSVRPI+DFNEVTFHYIECIHFYS+NSESQ QQVGD
Sbjct: 121 DGTYVRLSGHLKTFQGKTQLLVFSVRPIMDFNEVTFHYIECIHFYSQNSESQ-RQQVGDV 179
Query: 589 TQSHTV------NANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 750
TQS N NQAT LNPV+ SQN+DGNGRKNLDDMILDYLKQPACTARQQGIH+D
Sbjct: 180 TQSVNTTFQGGSNTNQATLLNPVVSSQNNDGNGRKNLDDMILDYLKQPACTARQQGIHID 239
Query: 751 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL 870
EIAQQLK+PKNKLEGV+QSLEGDGLIYSTIDEYHFKHVEL
Sbjct: 240 EIAQQLKIPKNKLEGVVQSLEGDGLIYSTIDEYHFKHVEL 279
>gi|225446038|ref|XP_002268721.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 277
Score = 270 bits (689), Expect = 4e-070
Identities = 141/275 (51%), Positives = 193/275 (70%), Gaps = 10/275 (3%)
Frame = +1
Query: 55 MFSNSQFEPNSAFSGGGFMSSQPTQPYESS-SSSSSSTTKGIVPVTVKQINES-SHSGEK 228
M+S+SQF+ N+AFSGGGFM SQ TQ E S + + T+ ++P+TVKQI+E+ S +K
Sbjct: 1 MYSHSQFDGNAAFSGGGFMPSQATQAAEPGFSPARNRDTQALLPLTVKQISEAFLSSDDK 60
Query: 229 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 408
S +I+G+E+ NV+LVG+V +K +VT+V F LDDGTGRIDC RWVNE+ D +EME +
Sbjct: 61 SNFLIDGVEVNNVTLVGMVFNK-AERVTDVGFMLDDGTGRIDCNRWVNEAVDTKEMEGIL 119
Query: 409 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 588
DG YVR++GHLK FQG + L VFS+RP+ DFNE+ H+IECI+ + N++S++ Q G
Sbjct: 120 DGMYVRVHGHLKGFQGKRHLNVFSIRPVTDFNEIASHFIECIYVHIYNTKSRV--QAGGP 177
Query: 589 TQSHTVNANQATTLNPVMPSQNSD-----GNGRKNLDDMILDYLKQPACTARQQGIHLDE 753
TQSH N T L SQ + G G K +D +++DYL+QP AR QG+ DE
Sbjct: 178 TQSHVTNPAIGTPLKGYQASQPNQFSGQYGAGLKGVDQLVIDYLQQPQSLARDQGVGRDE 237
Query: 754 IAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
+AQQL VP +K+ I+SLE +GLIYSTIDE+H+K
Sbjct: 238 LAQQLNVPVDKIMESIRSLEEEGLIYSTIDEWHYK 272
>gi|225429793|ref|XP_002282796.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 268
Score = 263 bits (671), Expect = 5e-068
Identities = 135/264 (51%), Positives = 185/264 (70%), Gaps = 8/264 (3%)
Frame = +1
Query: 70 QFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHSG-EKSGIVIN 246
QF+P S GGF SSQ T SS+ S T+G++PVTVKQI+E+SHSG +KS I+
Sbjct: 7 QFDPFS----GGFSSSQSTD--SGVSSAKSRETQGLIPVTVKQISEASHSGDDKSNFQID 60
Query: 247 GIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVR 426
G+++TN++LVG+V DK +VT+V F LDDGTGRI+CKRWVNE+FD REME++ DG YVR
Sbjct: 61 GVDVTNITLVGMVFDKS-ERVTDVSFALDDGTGRIECKRWVNEAFDTREMENISDGIYVR 119
Query: 427 LNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTV 606
LNGHL++ GN+QL+ FSVRP+ +F+E+ FH+IE IH + KNS+++L S +V
Sbjct: 120 LNGHLRSSGGNRQLVAFSVRPVTNFDEIAFHFIEVIHLHLKNSKTRLPSDALTQPLSASV 179
Query: 607 NANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNK 786
P +G K LD M+LDYL+QP+ R++GIH DE++QQLK+ K
Sbjct: 180 KTESTGYQTPSSQLSAQSVDGVKGLDQMVLDYLQQPSNYDREKGIHRDELSQQLKISTEK 239
Query: 787 LEGVIQSLEGDGLIYSTIDEYHFK 858
+ I++LE +GLIYSTIDE+H+K
Sbjct: 240 IMESIRTLEEEGLIYSTIDEFHYK 263
>gi|255634690|gb|ACU17707.1| unknown [Glycine max]
Length = 292
Score = 255 bits (651), Expect = 1e-065
Identities = 132/281 (46%), Positives = 198/281 (70%), Gaps = 11/281 (3%)
Frame = +1
Query: 40 SPIEKMFSNSQFEPNSAFSGGGFMSSQPTQPYESS-SSSSSSTTKGIVPVTVKQINESSH 216
S + KMFS SQF+ +AFSGGGF SSQP+ +SS + S+S T G+VPVTVKQI+E+S
Sbjct: 13 SRVSKMFSGSQFDTTTAFSGGGFTSSQPSTLNDSSPAPSNSRETPGLVPVTVKQISEASQ 72
Query: 217 SG-EKSGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDARE 393
SG EKS VING++L NV+LVG++ +K V + T+V F LDDGTGRI C+RW+NE+FD +E
Sbjct: 73 SGDEKSNFVINGVDLNNVTLVGMMFEK-VERNTDVSFVLDDGTGRIKCRRWINEAFDTKE 131
Query: 394 MESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQ 573
ME+V + YVR+ GHLK+FQG +QL+ FSVRP+ +F+E+ FH+I+CIH + ++ G
Sbjct: 132 MEAVMNDMYVRVYGHLKSFQGVKQLVAFSVRPVTNFDEIPFHFIDCIHNHLRSKIKVEGI 191
Query: 574 QVGDATQSHTVNA------NQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQ 735
+ + ++ N++ NPV ++ D G K +D +++DYL+Q + + +
Sbjct: 192 TSANPSSGSSLETPVKSAPNRSQASNPVCAQRSVD--GLKGIDKLVMDYLEQHSDRSDGR 249
Query: 736 GIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
GIH+DE++++LK+P K++ +++L DG IYSTID+ H+K
Sbjct: 250 GIHVDELSRELKLPIEKIKLSLKTLADDGEIYSTIDDDHYK 290
>gi|68299229|emb|CAJ13715.1| putative replication factor A [Capsicum chinense]
Length = 299
Score = 242 bits (616), Expect = 1e-061
Identities = 126/278 (45%), Positives = 190/278 (68%), Gaps = 20/278 (7%)
Frame = +1
Query: 64 NSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTTKG-----IVPVTVKQINES-SHSGE 225
N+QF+ N+AFSGGGFM SQ TQ ++S S S TK ++P+TVKQI+E+ S +
Sbjct: 24 NNQFDGNAAFSGGGFMPSQATQ---TASDHSFSPTKNRDSQTLIPLTVKQISEAFQSSDD 80
Query: 226 KSGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESV 405
K+ +I+G+++ NV LVG++ +K +T V F +DDGTGR+DC RWVNE+ D +EME++
Sbjct: 81 KTNFLIDGVDVNNVKLVGILFNK-AEMLTAVSFVVDDGTGRLDCFRWVNEAVDTKEMEAL 139
Query: 406 QDGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNS-------ESQ 564
+G YVR++GHLK FQG +QL+ +SVRP+ D+NE+ H+ E I+ +S NS S
Sbjct: 140 TNGIYVRVHGHLKGFQGKKQLMAYSVRPVDDYNEIASHFAEVIYVHSYNSRLRKQQDSSF 199
Query: 565 LGQQVGDATQSHTVNANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIH 744
+ QV ++ + + QA+ N P N DG G + M+LDYL+QP+C A ++G+H
Sbjct: 200 MSAQVPSSSFNTPLKGYQASASNQ-FPGFNMDGIG--GVHKMVLDYLQQPSCLALEKGVH 256
Query: 745 LDEIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
+E+AQQL+VP K+ G +++LE +GL+YSTID++H+K
Sbjct: 257 RNELAQQLRVPSEKIMGAMEALESEGLVYSTIDDFHYK 294
>gi|224121196|ref|XP_002330767.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 241 bits (614), Expect = 2e-061
Identities = 130/276 (47%), Positives = 187/276 (67%), Gaps = 17/276 (6%)
Frame = +1
Query: 58 FSNSQFEPNSAFSGGGFMSSQPTQPYES--SSSSSSSTTKGIVPVTVKQINESSHSG-EK 228
FS F P+ + S P+ S S S SS + G+VPVTVKQI+++S SG EK
Sbjct: 13 FSGGGFMPSQSTQ---LTDSTPSPAKASLLSLSLSSRNSLGVVPVTVKQISQASQSGDEK 69
Query: 229 SGIVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQ 408
S VING+++TNV++VG+V +K K T+V F +DDGTGRI C+RWV E+FD EME+VQ
Sbjct: 70 SSFVINGVDVTNVTVVGMVFNK-AEKSTDVSFVIDDGTGRIGCRRWVTENFDKLEMEAVQ 128
Query: 409 DGTYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDA 588
DG YVR+ GHL+ FQ +QL+ FSVRP+ +F+E+TFH+I+CIH + +NS+ Q G +
Sbjct: 129 DGMYVRVIGHLRVFQDVKQLVAFSVRPVTNFDEITFHFIDCIHSHLQNSK----LQGGAS 184
Query: 589 TQSHTVNANQAT------TLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLD 750
TQ H V ++ T T + S+ D +G K+ D ++LD L+Q + +++G+H+D
Sbjct: 185 TQLHMVESSMNTPVRNGQTFTSNLMSKQFDVDGLKDCDQLVLDRLQQSSSIGQEKGMHMD 244
Query: 751 EIAQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
E+ QQLK+P K++ I+SLE +GLIYSTIDE+H+K
Sbjct: 245 ELCQQLKLPMEKIKESIRSLEDEGLIYSTIDEFHYK 280
>gi|31790111|gb|AAP58374.1| RPA 32kDa [Pisum sativum]
Length = 273
Score = 236 bits (602), Expect = 5e-060
Identities = 122/272 (44%), Positives = 186/272 (68%), Gaps = 9/272 (3%)
Frame = +1
Query: 61 SNSQFEPNSAFSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHSG-EKSGI 237
S+SQF+ ++AFSGGGF SSQ + S + + S ++G+VPVTVKQI+E+S SG EKS
Sbjct: 3 SSSQFDSSNAFSGGGFTSSQLNE--SSPAPTKSRDSQGLVPVTVKQISEASQSGDEKSNF 60
Query: 238 VINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGT 417
ING++LTNV+LVG+V +K + T+V F LDDGTGRI C+RWVNE+FD++EME V +
Sbjct: 61 AINGVDLTNVTLVGMVYEK-TERNTDVNFVLDDGTGRIKCRRWVNETFDSKEMEEVSNDM 119
Query: 418 YVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQS 597
YVR+ G+LK+FQG +QL FSVRP+ +F+E+ FH+I+CIH + G +
Sbjct: 120 YVRVYGNLKSFQGVKQLGAFSVRPVTNFDEIPFHFIDCIHSHLLAKVKLEGTPSTYPPTN 179
Query: 598 HTVNANQATTLNPVMPSQNS-----DGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQ 762
++N + LN N +G ++ D +++DYL+Q + ++GIH++E+A+
Sbjct: 180 SSINTPVKSALNGSQAPSNPGYTQYSTDGLEDCDKLVIDYLQQHSSMLDERGIHVEELAR 239
Query: 763 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
+LK+P +++ +++LE DGL+YSTID+ H+K
Sbjct: 240 ELKLPLDRIRLSVKALEDDGLVYSTIDDSHYK 271
>gi|255574103|ref|XP_002527967.1| Replication protein A 30 kDa subunit, putative
[Ricinus communis]
Length = 242
Score = 210 bits (533), Expect = 5e-052
Identities = 105/174 (60%), Positives = 144/174 (82%), Gaps = 6/174 (3%)
Frame = +1
Query: 61 SNSQFEPNSAFSGGGFMSSQPTQPYESS-SSSSSSTTKGIVPVTVKQINESSHSG-EKSG 234
S+SQFE +FSGGGFMSSQ +QP +S+ S + S ++G+VPVTVKQI+++SHSG E S
Sbjct: 3 SSSQFE---SFSGGGFMSSQSSQPTDSAPSPAKSRDSQGLVPVTVKQISQASHSGDENSN 59
Query: 235 IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDG 414
VI+G+++TNV++VG+V DK KVT+V FT+DDGTGRI CKRWVNE+FD+ EME++QDG
Sbjct: 60 YVIDGVDVTNVTVVGMVFDK-AQKVTDVNFTVDDGTGRIGCKRWVNENFDSSEMETIQDG 118
Query: 415 TYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQ 576
YVR++GHL++FQG +QL FSVRP+++F+EVTFH+I+CIH + NS+SQ +Q
Sbjct: 119 MYVRVSGHLRSFQGVRQLGAFSVRPVMNFDEVTFHFIDCIHTHLLNSKSQFTKQ 172
>gi|294460336|gb|ADE75749.1| unknown [Picea sitchensis]
Length = 281
Score = 203 bits (516), Expect = 5e-050
Identities = 120/278 (43%), Positives = 175/278 (62%), Gaps = 20/278 (7%)
Frame = +1
Query: 67 SQFEPNSAFSGGGFMSSQPTQPYESSSSS--SSSTTKGIVPVTVKQINESSH--SGEKSG 234
SQ + S FSGGGFM SQ TQ E SS S T G++P+TVKQI++++ S E S
Sbjct: 6 SQSDGGSLFSGGGFMPSQATQVNEGGFSSVRKSGTATGLLPLTVKQISQATQKPSDENSN 65
Query: 235 IVINGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDG 414
I+G+++ NV+LVG+V +K+ +VT+V F LDDGTGR++ KRWVN++ ++ EM VQ+G
Sbjct: 66 FTIDGVDVNNVTLVGMVFNKE-ERVTDVSFYLDDGTGRMEVKRWVNDAMESAEMADVQNG 124
Query: 415 TYVRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQ 594
+YVR++GHL++FQ + + FSVRP+ DFNEVTFH +ECI + N + Q G ATQ
Sbjct: 125 SYVRVHGHLRSFQNKKLVNAFSVRPVTDFNEVTFHSLECIFVHLYNMKVQ-----GGATQ 179
Query: 595 SHTVN--ANQATTLNPVMPSQN---SDG----NGRKNLDDMILDYLKQPACTARQQGIHL 747
++ + A T PS N S G G K+L+ M+ ++PA A + G+H+
Sbjct: 180 PNSASPVAKGPPTPFSNTPSHNQFMSPGPVSVGGAKDLNRMVQSIFEEPANLAIEHGVHV 239
Query: 748 DEIAQQLK-VPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
D++ ++L K ++ I L +G IYSTIDE H+K
Sbjct: 240 DDVVRRLHGFTKKQIMESIAFLINEGYIYSTIDEDHYK 277
>gi|297832926|ref|XP_002884345.1| hypothetical protein ARALYDRAFT_477538
[Arabidopsis lyrata subsp. lyrata]
Length = 278
Score = 201 bits (509), Expect = 3e-049
Identities = 104/272 (38%), Positives = 168/272 (61%), Gaps = 12/272 (4%)
Frame = +1
Query: 70 QFEPNSAFSGGGFMSSQ-PTQPYESSSSSSSSTTKGIVPVTVKQINESSHSGEKSGIVIN 246
+F+ N+AF+GGGFM SQ TQ ++SSSS + + ++P+T+KQ++ +S +GE S I+
Sbjct: 5 EFDGNAAFAGGGFMPSQATTQAHDSSSSLKNRDVRTLLPLTLKQLSSASTTGE-SNFSID 63
Query: 247 GIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVR 426
G+++ V++VG + + +++T+V+F +DDGTG +DC RW E + EME+V+ G YVR
Sbjct: 64 GVDINTVAIVGRISRME-NRITQVEFVVDDGTGWVDCVRWCQERQETEEMEAVKLGMYVR 122
Query: 427 LNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTV 606
L+GHLK FQG + + VFS+RP+ DFNE+ H+ EC++ + N++ + G + AT +
Sbjct: 123 LHGHLKIFQGKRSVNVFSIRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQATTTPRP 181
Query: 607 NANQATTLNPVMPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIAQ 762
+T P P Q N N + +L+YL QP + G+H D IA+
Sbjct: 182 QMPYSTMPTPAKPYQTGPSNQFPNQFNDPMHGVKQTVLNYLNQPMHLVSEAGVHCDIIAR 241
Query: 763 QLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
L++P +++ ++ L DG IYST+DE FK
Sbjct: 242 DLRIPLPQVKDALEQLSNDGCIYSTMDETCFK 273
>gi|18396383|ref|NP_566188.1| replication factor A2 [Arabidopsis thaliana]
Length = 278
Score = 195 bits (495), Expect = 1e-047
Identities = 104/271 (38%), Positives = 165/271 (60%), Gaps = 12/271 (4%)
Frame = +1
Query: 73 FEPNSAFSGGGFMSSQ-PTQPYESSSSSSSSTTKGIVPVTVKQINESSHSGEKSGIVING 249
F+ N+AF+GGGFM SQ TQ +ESSSS + + ++P+T+KQ++ +S +GE S I+G
Sbjct: 6 FDGNAAFAGGGFMPSQATTQAHESSSSLKNRDVRTLLPLTLKQLSSASTTGE-SNFSIDG 64
Query: 250 IELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRL 429
+++ V +VG + + +++T+V F +DDGTG +DC RW + + EME+V+ G YVRL
Sbjct: 65 VDIKTVVIVGRISRME-NRITQVDFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRL 123
Query: 430 NGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTVN 609
+GHLK FQG + + VFSVRP+ DFNE+ H+ EC++ + N++ + G + T +
Sbjct: 124 HGHLKIFQGKRSVNVFSVRPVTDFNEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRPQ 182
Query: 610 ANQATTLNPVMPSQNSDGNGRKN--------LDDMILDYLKQPACTARQQGIHLDEIAQQ 765
+T P P Q N N + +L+YL QP + G+H D IA++
Sbjct: 183 MPYSTMPTPAKPYQTGPSNQFPNQFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARE 242
Query: 766 LKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
L++P +++ ++ L DG IYST+DE FK
Sbjct: 243 LRIPLLQVKEALEQLSNDGCIYSTLDETCFK 273
>gi|330318724|gb|AEC11022.1| replication protein a 30 kda subunit [Camellia
sinensis]
Length = 222
Score = 190 bits (481), Expect = 6e-046
Identities = 92/172 (53%), Positives = 130/172 (75%), Gaps = 3/172 (1%)
Frame = +1
Query: 112 SSQPTQPYE-SSSSSSSSTTKGIVPVTVKQINESSHSG-EKSGIVINGIELTNVSLVGLV 285
SSQ TQ + SS + S G+VP+TVKQI+ES+HSG EKS V++G+++ NV+L+G+V
Sbjct: 13 SSQSTQATDIGSSPAKSRNAYGVVPITVKQISESAHSGDEKSNYVVDGVDVVNVTLIGMV 72
Query: 286 CDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQ 465
K +VT+V FTLDDGTGRIDC RWVNE+FD++EME++QDG YVR+NG +K+ QG +Q
Sbjct: 73 -SKKTERVTDVAFTLDDGTGRIDCNRWVNEAFDSKEMENIQDGIYVRVNGLIKSLQGRRQ 131
Query: 466 LLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTVNANQA 621
L+ FSVRP+ +F+E++FH+IECIHF+ +NS+++L QS T + A
Sbjct: 132 LIAFSVRPVTNFDEISFHFIECIHFHLQNSKTKLQGNTTTQPQSATPSVKTA 183
>gi|115450003|ref|NP_001048604.1| Os02g0829100 [Oryza sativa Japonica Group]
Length = 279
Score = 178 bits (451), Expect = 2e-042
Identities = 102/273 (37%), Positives = 159/273 (58%), Gaps = 13/273 (4%)
Frame = +1
Query: 73 FEPNSAFSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHS---GEKSG-IV 240
F AFS F SSQ +S++ S S +P+TVKQI+E+ S GEK V
Sbjct: 4 FSQPDAFSPSQFTSSQ-NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFV 62
Query: 241 INGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTY 420
++G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+G Y
Sbjct: 63 VDGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 121
Query: 421 VRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSH 600
V + G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N++SQ+G +
Sbjct: 122 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMG 181
Query: 601 TVNAN---QATTLNPV----MPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIA 759
+ ++N + TT V P + + +L+ +L+ ++PA + G+H+DEI
Sbjct: 182 SSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIV 241
Query: 760 QQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
++ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 242 KRFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 274
>gi|222623970|gb|EEE58102.1| hypothetical protein OsJ_08977 [Oryza sativa
Japonica Group]
Length = 278
Score = 178 bits (451), Expect = 2e-042
Identities = 102/273 (37%), Positives = 159/273 (58%), Gaps = 13/273 (4%)
Frame = +1
Query: 73 FEPNSAFSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHS---GEKSG-IV 240
F AFS F SSQ +S++ S S +P+TVKQI+E+ S GEK V
Sbjct: 3 FSQPDAFSPSQFTSSQ-NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGITGEKGAPFV 61
Query: 241 INGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTY 420
++G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+G Y
Sbjct: 62 VDGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 120
Query: 421 VRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSH 600
V + G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N++SQ+G +
Sbjct: 121 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGSPAKTYSAMG 180
Query: 601 TVNAN---QATTLNPV----MPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIA 759
+ ++N + TT V P + + +L+ +L+ ++PA + G+H+DEI
Sbjct: 181 SSSSNGFSEMTTPTSVKSNPAPVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEIV 240
Query: 760 QQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
++ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 241 KRFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 273
>gi|218191867|gb|EEC74294.1| hypothetical protein OsI_09546 [Oryza sativa Indica
Group]
Length = 279
Score = 178 bits (450), Expect = 2e-042
Identities = 102/274 (37%), Positives = 160/274 (58%), Gaps = 15/274 (5%)
Frame = +1
Query: 73 FEPNSAFSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHS---GEKSG-IV 240
F AFS F SSQ +S++ S S +P+TVKQI+E+ S GEK V
Sbjct: 4 FSQPDAFSPSQFTSSQ-NAAADSTTPSKSRGASSTMPLTVKQISEAQQSGTTGEKGAPFV 62
Query: 241 INGIELTNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTY 420
++G+E NV LVGLV K + T+V FT+DDGTGR+D RWVN+ D+ E +VQ+G Y
Sbjct: 63 VDGVETANVRLVGLVSGK-TERNTDVSFTIDDGTGRLDFIRWVNDGADSAETAAVQNGMY 121
Query: 421 VRLNGHLKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLG------QQVG 582
V + G LK Q ++ F++RP+ D+NEVT H+I+C+ + +N++SQ+G +G
Sbjct: 122 VSVIGSLKGLQERKRATAFAIRPVTDYNEVTLHFIQCVRMHLENTKSQIGGPAKTYSAMG 181
Query: 583 DATQSHTVNANQATTL--NPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEI 756
++ + T++ NP P + + +L+ +L+ ++PA + G+H+DEI
Sbjct: 182 SSSSNGFSEMTTPTSVKSNPA-PVLSVTNGSKTDLNTEVLNVFREPANVESEHGVHIDEI 240
Query: 757 AQQLKVPKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
++ ++P+ K++ I L G IYSTIDE H+K
Sbjct: 241 VKRFRLPEAKIKVAIDYLADIGHIYSTIDESHYK 274
>gi|194693140|gb|ACF80654.1| unknown [Zea mays]
Length = 273
Score = 171 bits (431), Expect = 4e-040
Identities = 94/266 (35%), Positives = 157/266 (59%), Gaps = 13/266 (4%)
Frame = +1
Query: 91 FSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHS--GEKSG-IVINGIELT 261
FS F SSQ +S++ S +P+TVKQ+ ++ S GEK ++NG+E+
Sbjct: 9 FSPSQFTSSQ-NAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFIVNGVEMA 67
Query: 262 NVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHL 441
N+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E ++Q+G Y+ + G L
Sbjct: 68 NIRLVGMVNAK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSFETAAIQNGMYIAVIGSL 126
Query: 442 KTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSE------SQLGQQVGDATQSHT 603
K Q ++ FS+RPI DFNEVT H+I+C+ + +N+E +++ +G + +
Sbjct: 127 KGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTELKAGSPARINSSMGVSFSNGF 186
Query: 604 VNANQATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLK-VPK 780
++ T+L P+ + G+ +L +L++ +PA + G+H+DE+ ++ K +PK
Sbjct: 187 SESSTPTSLKS-SPAPVTSGSSDTDLHTQVLNFFNEPANLESEHGVHVDEVLKRFKLLPK 245
Query: 781 NKLEGVIQSLEGDGLIYSTIDEYHFK 858
++ I G +YSTIDE+H+K
Sbjct: 246 KQITDAIDYNMDSGRLYSTIDEFHYK 271
>gi|326520341|dbj|BAK07429.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 277
Score = 170 bits (430), Expect = 5e-040
Identities = 97/268 (36%), Positives = 156/268 (58%), Gaps = 15/268 (5%)
Frame = +1
Query: 88 AFSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINES--SHSGEKSG-IVINGIEL 258
AFS F +SQ S+ + G +P+TVKQI ++ + +GEK G V++G+E
Sbjct: 9 AFSPSQFTASQ--NAAADSTPNKFRGASGTMPLTVKQIADAQLAGTGEKGGPFVVDGVET 66
Query: 259 TNVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGH 438
NV LVG+V K V + T+V FTLDDGTGRID RWVN++ D+ E ++Q+G YV + G
Sbjct: 67 ANVRLVGMVSGK-VERNTDVSFTLDDGTGRIDFIRWVNDAADSAETAAIQNGMYVAVIGS 125
Query: 439 LKTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTVNANQ 618
LK Q ++ F+VRPI D+NEVT H+I+C+ +++N++S++G + T +N+
Sbjct: 126 LKGVQDKKRATAFAVRPITDYNEVTLHFIQCVRMHAENTKSKVGSPTHTNSSMGTPFSNR 185
Query: 619 --------ATTLNPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLKV 774
+ NP P+ + + +L+ ++PA G+H+D+IA++ ++
Sbjct: 186 LNEAATPPSVKSNPA-PAASGTNGSETDFYTQVLNVFREPANMESDHGVHMDDIAKRFRL 244
Query: 775 PKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
P K++ I G IYSTID++H+K
Sbjct: 245 PALKIKEAIDYHVDVGHIYSTIDDFHYK 272
>gi|242067082|ref|XP_002454830.1| hypothetical protein SORBIDRAFT_04g038190
[Sorghum bicolor]
Length = 278
Score = 168 bits (425), Expect = 2e-039
Identities = 98/268 (36%), Positives = 156/268 (58%), Gaps = 15/268 (5%)
Frame = +1
Query: 91 FSGGGFMSSQPTQPYESSSSSSSSTTKGIVPVTVKQINESSHS--GEKSG-IVINGIELT 261
FS F +SQ +S++ S +P+TVKQ+ ++ S GEK V++G+E+
Sbjct: 9 FSPSQFTASQ-NAAADSTTPSKMRGASSTMPLTVKQVVDAQQSGTGEKGAPFVVDGVEMA 67
Query: 262 NVSLVGLVCDKDVSKVTEVKFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHL 441
N+ LVG+V K V + T+V FTLDDGTGR+D RWVN++ D+ E +VQ+G YV + G L
Sbjct: 68 NIRLVGMVNGK-VERTTDVTFTLDDGTGRLDFIRWVNDASDSSETAAVQNGMYVAVIGSL 126
Query: 442 KTFQGNQQLLVFSVRPIVDFNEVTFHYIECIHFYSKNSESQLG------QQVGDATQSHT 603
K Q ++ FS+RPI DFNEVT H+I+C+ + +N++ + G +G + +
Sbjct: 127 KGLQERKRATAFSIRPITDFNEVTLHFIQCVRMHIENTKLKAGSPARTSSSMGVSVSNGF 186
Query: 604 VNANQATTL--NPVMPSQNSDGNGRKNLDDMILDYLKQPACTARQQGIHLDEIAQQLK-V 774
++ T+L NP P +L+ +L + +PA + G+H+DE+ +Q K +
Sbjct: 187 SESSTPTSLKSNPA-PLTGGGSGSDTDLNKQVLHFFSEPANLESEHGVHVDEVYKQFKQL 245
Query: 775 PKNKLEGVIQSLEGDGLIYSTIDEYHFK 858
PK+K++ I G +YSTID++HFK
Sbjct: 246 PKDKIKEAIAFHVDAGHLYSTIDDFHFK 273
>gi|334185046|ref|NP_001189796.1| replication factor A2 [Arabidopsis thaliana]
Length = 298
Score = 168 bits (423), Expect = 3e-039
Identities = 88/248 (35%), Positives = 146/248 (58%), Gaps = 11/248 (4%)
Frame = +1
Query: 139 SSSSSSSSTTKGIVPVTVKQINESSHSGEKSGIVINGIELTNVSLVGLVCDKDVSKVTEV 318
+ SS + + ++P+T+KQ++ +S +GE S I+G+++ V +VG + + +++T+V
Sbjct: 49 AKSSIRNRDVRTLLPLTLKQLSSASTTGE-SNFSIDGVDIKTVVIVGRISRME-NRITQV 106
Query: 319 KFTLDDGTGRIDCKRWVNESFDAREMESVQDGTYVRLNGHLKTFQGNQQLLVFSVRPIVD 498
F +DDGTG +DC RW + + EME+V+ G YVRL+GHLK FQG + + VFSVRP+ D
Sbjct: 107 DFVVDDGTGWVDCVRWCHARQETEEMEAVKLGMYVRLHGHLKIFQGKRSVNVFSVRPVTD 166
Query: 499 FNEVTFHYIECIHFYSKNSESQLGQQVGDATQSHTVNANQATTLNPVMPSQNSDGNGRKN 678
FNE+ H+ EC++ + N++ + G + T + +T P P Q N N
Sbjct: 167 FNEIVHHFTECMYVHMYNTKLR-GGSITQDTATPRPQMPYSTMPTPAKPYQTGPSNQFPN 225
Query: 679 --------LDDMILDYLKQPACTARQQGIHLDEIAQQLKVPKNKLEGVIQSLEGDGLIYS 834
+ +L+YL QP + G+H D IA++L++P +++ ++ L DG IYS
Sbjct: 226 QFNDSMHGVKQTVLNYLNQPMHIVSEAGVHCDIIARELRIPLLQVKEALEQLSNDGCIYS 285
Query: 835 TIDEYHFK 858
T+DE FK
Sbjct: 286 TLDETCFK 293
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,053,028,657,214
Number of Sequences: 15229318
Number of Extensions: 1053028657214
Number of Successful Extensions: 300909508
Number of sequences better than 0.0: 0
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