BLASTX 7.6.2
Query= UN09371 /QuerySize=974
(973 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo ... 455 3e-128
TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 f... 81 8e-016
TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 f... 81 8e-016
TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L... 49 3e-006
TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L... 49 3e-006
>TAIR9_protein||AT1G78630.1 | Symbols: emb1473 | emb1473 (embryo defective
1473); structural constituent of ribosome | chr1:29575997-29577406
FORWARD
Length = 242
Score = 455 bits (1169), Expect = 3e-128
Identities = 227/246 (92%), Positives = 233/246 (94%), Gaps = 6/246 (2%)
Frame = +2
Query: 44 MAVLCSSSTVIL--PSVKTSGGNRRSPFLGFSLTAISKPSVRVGIYANTKRGLQVKCEAE 217
MAVLCSSSTVIL SVK+SG R+SPFLGFSLTAISKPSVRVGIYAN+KRGLQVKCEAE
Sbjct: 1 MAVLCSSSTVILSSSSVKSSGSERKSPFLGFSLTAISKPSVRVGIYANSKRGLQVKCEAE 60
Query: 218 EQGTTATATSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWYVVDATDKILG 397
T TSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPW+VVDATDKILG
Sbjct: 61 ----PTTTTSLVPANQRWMFDEEEANGPDIWNTTWYPKASDHVNTDKPWFVVDATDKILG 116
Query: 398 RLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 577
RLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV
Sbjct: 117 RLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 176
Query: 578 ETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDKR 757
ETFDQLQQRIPERI+EHAVRGMLPKGRLGRALFNHLKVYKGP+HPHEAQKPLDLPIRDKR
Sbjct: 177 ETFDQLQQRIPERIVEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPLDLPIRDKR 236
Query: 758 IQLQK* 775
IQLQK*
Sbjct: 237 IQLQK* 242
>TAIR9_protein||AT3G01790.1 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 81 bits (199), Expect = 8e-016
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 362 WYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 541
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+++ +G+K K Y
Sbjct: 32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91
Query: 542 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 721
R H+G G + + + P +I AV MLP L L++++G EHP
Sbjct: 92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150
Query: 722 QKPLD 736
KPL+
Sbjct: 151 DKPLE 155
>TAIR9_protein||AT3G01790.2 | Symbols: | ribosomal protein L13 family protein |
chr3:283880-285583 REVERSE
Length = 206
Score = 81 bits (199), Expect = 8e-016
Identities = 44/125 (35%), Positives = 68/125 (54%), Gaps = 1/125 (0%)
Frame = +2
Query: 362 WYVVDATDKILGRLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLY 541
W V DA ++LGRLAS I+ ++ K+ +Y P+ D G IV+NA+++ +G+K K Y
Sbjct: 32 WRVFDARGQVLGRLASQISTVLQAKDKPTYCPNRDDGDICIVLNAKEIGFTGRKLTDKFY 91
Query: 542 RRHSGRPGGMTVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPEHPHEA 721
R H+G G + + + P +I AV MLP L L++++G EHP
Sbjct: 92 RWHTGYIGHLKERSLKDQMAKDPTEVIRKAVWRMLPSNNLRDDRDRKLRIFEGGEHPF-G 150
Query: 722 QKPLD 736
KPL+
Sbjct: 151 DKPLE 155
>TAIR9_protein||AT5G48760.1 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 49 bits (116), Expect = 3e-006
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +2
Query: 398 RLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 577
R+ +H+ G+ + + G V++V E++ +SG QK+ R T
Sbjct: 11 RVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTK 70
Query: 578 ETFDQLQQRIPERIIEHAVRGMLP-KGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDK 754
+ + R P +I VRGM+P K + G A LKVY+G P++ K + +P K
Sbjct: 71 PSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALK 130
Query: 755 RIQLQ 769
++LQ
Sbjct: 131 VLRLQ 135
>TAIR9_protein||AT5G48760.2 | Symbols: | 60S ribosomal protein L13A (RPL13aD) |
chr5:19771315-19772686 REVERSE
Length = 207
Score = 49 bits (116), Expect = 3e-006
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Frame = +2
Query: 398 RLASTIANHIRGKNLASYTPSVDMGAFVIVVNAEKVAVSGKKRNQKLYRRHSGRPGGMTV 577
R+ +H+ G+ + + G V++V E++ +SG QK+ R T
Sbjct: 11 RVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTK 70
Query: 578 ETFDQLQQRIPERIIEHAVRGMLP-KGRLGRALFNHLKVYKGPEHPHEAQKPLDLPIRDK 754
+ + R P +I VRGM+P K + G A LKVY+G P++ K + +P K
Sbjct: 71 PSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALK 130
Query: 755 RIQLQ 769
++LQ
Sbjct: 131 VLRLQ 135
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,257,720,425
Number of Sequences: 33410
Number of Extensions: 5257720425
Number of Successful Extensions: 195094093
Number of sequences better than 0.0: 0
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