BLASTX 7.6.2
Query= UN09389 /QuerySize=549
(548 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G09500.1 | Symbols: | 60S ribosomal protein L... 225 2e-059
TAIR9_protein||AT5G02610.1 | Symbols: | 60S ribosomal protein L... 222 1e-058
TAIR9_protein||AT3G55170.1 | Symbols: | 60S ribosomal protein L... 218 2e-057
TAIR9_protein||AT3G55170.2 | Symbols: | 60S ribosomal protein L... 218 2e-057
TAIR9_protein||AT2G39390.1 | Symbols: | 60S ribosomal protein L... 217 5e-057
>TAIR9_protein||AT3G09500.1 | Symbols: | 60S ribosomal protein L35 (RPL35A) |
chr3:2917047-2917895 FORWARD
Length = 124
Score = 225 bits (571), Expect = 2e-059
Identities = 116/124 (93%), Positives = 121/124 (97%)
Frame = -1
Query: 485 MARIKVHELRDKSKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 306
MARIKVHELR+KSKSDLQNQL++LKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELREKSKSDLQNQLKELKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 305 TSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYA 126
+SQKQKSALREAYKNKK +PLDLRPKKTRAIRRRLTKHQ SLKTEREKKKEMYFPIRKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query: 125 IKV* 114
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT5G02610.1 | Symbols: | 60S ribosomal protein L35 (RPL35D) |
chr5:587611-588547 FORWARD
Length = 124
Score = 222 bits (565), Expect = 1e-058
Identities = 114/124 (91%), Positives = 119/124 (95%)
Frame = -1
Query: 485 MARIKVHELRDKSKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 306
MARIKVHELRDKSK+DLQNQL++ KAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELRDKSKTDLQNQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 305 TSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYA 126
SQKQKSALREAYKNKK +PLDLRPKKTRAIRRRLTKHQ SLKTEREKKKEMYFP+RKYA
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPVRKYA 120
Query: 125 IKV* 114
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT3G55170.1 | Symbols: | 60S ribosomal protein L35 (RPL35C) |
chr3:20453136-20454293 REVERSE
Length = 124
Score = 218 bits (555), Expect = 2e-057
Identities = 113/124 (91%), Positives = 118/124 (95%)
Frame = -1
Query: 485 MARIKVHELRDKSKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 306
MARIKVHELRDKSKSDL QL++LKAELA LRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 305 TSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYA 126
+SQKQKSALREAYKNKK +PLDLRPKKTRAIRRRLTKHQ SLKTEREKKK+MYFPIRKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120
Query: 125 IKV* 114
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT3G55170.2 | Symbols: | 60S ribosomal protein L35 (RPL35C) |
chr3:20453136-20454293 REVERSE
Length = 124
Score = 218 bits (555), Expect = 2e-057
Identities = 113/124 (91%), Positives = 118/124 (95%)
Frame = -1
Query: 485 MARIKVHELRDKSKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 306
MARIKVHELRDKSKSDL QL++LKAELA LRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELRDKSKSDLSTQLKELKAELASLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 305 TSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYA 126
+SQKQKSALREAYKNKK +PLDLRPKKTRAIRRRLTKHQ SLKTEREKKK+MYFPIRKYA
Sbjct: 61 SSQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKDMYFPIRKYA 120
Query: 125 IKV* 114
IKV*
Sbjct: 121 IKV* 124
>TAIR9_protein||AT2G39390.1 | Symbols: | 60S ribosomal protein L35 (RPL35B) |
chr2:16450803-16451762 REVERSE
Length = 124
Score = 217 bits (551), Expect = 5e-057
Identities = 112/124 (90%), Positives = 117/124 (94%)
Frame = -1
Query: 485 MARIKVHELRDKSKSDLQNQLQDLKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 306
MARIKVHELR+KSK+DL QL++ KAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV
Sbjct: 1 MARIKVHELREKSKADLSGQLKEFKAELALLRVAKVTGGAPNKLSKIKVVRKSIAQVLTV 60
Query: 305 TSQKQKSALREAYKNKKFIPLDLRPKKTRAIRRRLTKHQLSLKTEREKKKEMYFPIRKYA 126
SQKQKSALREAYKNKK +PLDLRPKKTRAIRRRLTKHQ SLKTEREKKKEMYFPIRKYA
Sbjct: 61 ISQKQKSALREAYKNKKLLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKEMYFPIRKYA 120
Query: 125 IKV* 114
IKV*
Sbjct: 121 IKV* 124
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,257,720,425
Number of Sequences: 33410
Number of Extensions: 5257720425
Number of Successful Extensions: 195094093
Number of sequences better than 0.0: 0
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