BLASTX 7.6.2
Query= UN09403 /QuerySize=1103
(1102 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|34146846|gb|AAQ62431.1| At3g01410 [Arabidopsis thaliana] 191 2e-046
gi|30678332|ref|NP_186790.2| RNase H domain-containing protein [... 191 2e-046
gi|6692261|gb|AAF24611.1|AC010870_4 putative RNase H [Arabidopsi... 191 2e-046
gi|224102015|ref|XP_002312512.1| predicted protein [Populus tric... 167 4e-039
gi|255588182|ref|XP_002534525.1| nuclease, putative [Ricinus com... 167 4e-039
gi|224108115|ref|XP_002314727.1| predicted protein [Populus tric... 165 2e-038
gi|38636806|dbj|BAD03047.1| putative RNase H domain-containing p... 163 6e-038
gi|225452547|ref|XP_002280233.1| PREDICTED: hypothetical protein... 162 1e-037
gi|296087711|emb|CBI34967.3| unnamed protein product [Vitis vini... 162 1e-037
gi|194700066|gb|ACF84117.1| unknown [Zea mays] 161 2e-037
gi|226495263|ref|NP_001141955.1| hypothetical protein LOC1002741... 161 2e-037
gi|195627916|gb|ACG35788.1| retrotransposon protein Ty3-gypsy su... 161 2e-037
gi|255552696|ref|XP_002517391.1| nuclease, putative [Ricinus com... 161 2e-037
gi|224077608|ref|XP_002305325.1| predicted protein [Populus tric... 159 7e-037
gi|326488477|dbj|BAJ93907.1| predicted protein [Hordeum vulgare ... 159 7e-037
gi|326499834|dbj|BAJ90752.1| predicted protein [Hordeum vulgare ... 159 7e-037
gi|326505852|dbj|BAJ91165.1| predicted protein [Hordeum vulgare ... 159 7e-037
gi|242081781|ref|XP_002445659.1| hypothetical protein SORBIDRAFT... 159 9e-037
gi|334182806|ref|NP_173819.2| RNase H domain-containing protein ... 158 2e-036
gi|212275993|ref|NP_001130760.1| hypothetical protein LOC1001918... 152 1e-034
>gi|34146846|gb|AAQ62431.1| At3g01410 [Arabidopsis thaliana]
Length = 294
Score = 191 bits (485), Expect = 2e-046
Identities = 97/142 (68%), Positives = 115/142 (80%), Gaps = 1/142 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+CTIEFDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 820 ADAQANRAVNLADGQIQCESRG 885
AD QAN A+ LADGQ Q S G
Sbjct: 273 ADKQANSAIFLADGQTQVISGG 294
>gi|30678332|ref|NP_186790.2| RNase H domain-containing protein [Arabidopsis
thaliana]
Length = 294
Score = 191 bits (485), Expect = 2e-046
Identities = 97/142 (68%), Positives = 115/142 (80%), Gaps = 1/142 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+CTIEFDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 820 ADAQANRAVNLADGQIQCESRG 885
AD QAN A+ LADGQ Q S G
Sbjct: 273 ADKQANSAIFLADGQTQVISGG 294
>gi|6692261|gb|AAF24611.1|AC010870_4 putative RNase H [Arabidopsis thaliana]
Length = 290
Score = 191 bits (485), Expect = 2e-046
Identities = 97/142 (68%), Positives = 115/142 (80%), Gaps = 1/142 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+CTIEFDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 150 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 208
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 209 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 268
Query: 820 ADAQANRAVNLADGQIQCESRG 885
AD QAN A+ LADGQ Q S G
Sbjct: 269 ADKQANSAIFLADGQTQVISGG 290
>gi|224102015|ref|XP_002312512.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 167 bits (421), Expect = 4e-039
Identities = 79/143 (55%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Frame = +1
Query: 448 FAQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGL 627
++Q +C +EFDGAS+GNPG+AGAGAVLR+ D ++ LR+GLGIATNN+AEYRA++LG+
Sbjct: 174 YSQKSCLLEFDGASKGNPGQAGAGAVLRN-DDGSLICRLREGLGIATNNMAEYRAILLGM 232
Query: 628 EYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGRE 807
+YAL+KG+ + +KGDS LVC Q+ W+ H + L E AK L + F S I H+ RE
Sbjct: 233 KYALEKGYTKIHVKGDSKLVCMQIEGSWKARHENITNLYEEAKKLKNSFLSFHISHVPRE 292
Query: 808 FNSEADAQANRAVNLADGQIQCE 876
+NSEAD+QAN A+ LADG++Q E
Sbjct: 293 YNSEADSQANLAIKLADGEVQEE 315
>gi|255588182|ref|XP_002534525.1| nuclease, putative [Ricinus communis]
Length = 262
Score = 167 bits (421), Expect = 4e-039
Identities = 82/139 (58%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+C +EFDGAS+GNPG AGAGA+LR+T D R++ LR+GLG TNNVAEYRA+ILG++YAL
Sbjct: 120 SCILEFDGASKGNPGPAGAGALLRTT-DGRIICRLREGLGQVTNNVAEYRAMILGMKYAL 178
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
KG+ +R++GDS LVC+QV W+V H + L E AK L +F S +I H+ R NSE
Sbjct: 179 KKGYTKIRVQGDSKLVCSQVQGLWKVKHKDMTNLYEQAKQLKDKFASFQISHVLRALNSE 238
Query: 820 ADAQANRAVNLADGQIQCE 876
ADAQAN A+ LADGQ+Q E
Sbjct: 239 ADAQANLAIQLADGQVQEE 257
>gi|224108115|ref|XP_002314727.1| predicted protein [Populus trichocarpa]
Length = 282
Score = 165 bits (416), Expect = 2e-038
Identities = 81/139 (58%), Positives = 105/139 (75%), Gaps = 1/139 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+C +EFDGAS+GNPG+AGAGAVLR T D ++ LR+GLGIATNN+AEYRA++LG++YAL
Sbjct: 143 SCLLEFDGASKGNPGQAGAGAVLR-TDDGSLICRLREGLGIATNNMAEYRAILLGMKYAL 201
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
KG+ +++KGDS LVC Q+ W+ H + L AK L + F S I H+ REFNSE
Sbjct: 202 QKGYTKIQVKGDSKLVCMQIQGSWKAKHVNITNLCTEAKKLKNSFLSFHISHVLREFNSE 261
Query: 820 ADAQANRAVNLADGQIQCE 876
ADAQAN AV+LADG++Q E
Sbjct: 262 ADAQANLAVHLADGEVQEE 280
>gi|38636806|dbj|BAD03047.1| putative RNase H domain-containing protein [Oryza
sativa Japonica Group]
Length = 351
Score = 163 bits (411), Expect = 6e-038
Identities = 81/142 (57%), Positives = 105/142 (73%), Gaps = 1/142 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGAS+GNPGKAGAGAV+R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 202 SSLSCLLEFDGASKGNPGKAGAGAVIRRL-DGTVIAQLREGLGIATNNAAEYRALILGLT 260
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ +R +GDS LVCNQV D WR H +A+L + K++ RF++ +I H+ REF
Sbjct: 261 YAAKKGFKYIRAQGDSKLVCNQVSDVWRARHDTMADLCKRVKEIKGRFHTFQINHVLREF 320
Query: 811 NSEADAQANRAVNLADGQIQCE 876
N++ADAQAN AV L ++ E
Sbjct: 321 NTDADAQANLAVELPGEKLLSE 342
>gi|225452547|ref|XP_002280233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 288
Score = 162 bits (408), Expect = 1e-037
Identities = 81/136 (59%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
Frame = +1
Query: 469 IEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKG 648
++FDGAS+GNPG+AGAGAVLR+ D + +LR+G+GIATNNVAEYRALILG++YAL KG
Sbjct: 151 LQFDGASKGNPGQAGAGAVLRA-DDGSAVIHLREGVGIATNNVAEYRALILGMKYALKKG 209
Query: 649 FRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADA 828
+ +R +GDS LVC Q W+ + +A+L E AK+L +F S +I+H+ REFNSEADA
Sbjct: 210 IKRIRARGDSQLVCMQFQGLWKTKNQNMADLCEEAKELGKKFLSFQIEHVLREFNSEADA 269
Query: 829 QANRAVNLADGQIQCE 876
QAN AVNL +GQ+Q E
Sbjct: 270 QANLAVNLTNGQVQEE 285
>gi|296087711|emb|CBI34967.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 162 bits (408), Expect = 1e-037
Identities = 81/136 (59%), Positives = 106/136 (77%), Gaps = 1/136 (0%)
Frame = +1
Query: 469 IEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKG 648
++FDGAS+GNPG+AGAGAVLR+ D + +LR+G+GIATNNVAEYRALILG++YAL KG
Sbjct: 150 LQFDGASKGNPGQAGAGAVLRA-DDGSAVIHLREGVGIATNNVAEYRALILGMKYALKKG 208
Query: 649 FRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADA 828
+ +R +GDS LVC Q W+ + +A+L E AK+L +F S +I+H+ REFNSEADA
Sbjct: 209 IKRIRARGDSQLVCMQFQGLWKTKNQNMADLCEEAKELGKKFLSFQIEHVLREFNSEADA 268
Query: 829 QANRAVNLADGQIQCE 876
QAN AVNL +GQ+Q E
Sbjct: 269 QANLAVNLTNGQVQEE 284
>gi|194700066|gb|ACF84117.1| unknown [Zea mays]
Length = 269
Score = 161 bits (406), Expect = 2e-037
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGAS+GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 124 SHLSCILEFDGASKGNPGKAGAGAIIRQV-DGSVIAQLREGLGIATNNAAEYRALILGLT 182
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ +R +GDS LVCNQV D WRV + +A + K+L F+ +I+H+ RE+
Sbjct: 183 YAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREY 242
Query: 811 NSEADAQANRAVNLADGQIQCES 879
NS ADAQAN AV L G++Q +S
Sbjct: 243 NSAADAQANFAVELPVGEVQEQS 265
>gi|226495263|ref|NP_001141955.1| hypothetical protein LOC100274104 [Zea mays]
Length = 192
Score = 161 bits (406), Expect = 2e-037
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGAS+GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 47 SHLSCILEFDGASKGNPGKAGAGAIIRQV-DGSVIAQLREGLGIATNNAAEYRALILGLT 105
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ +R +GDS LVCNQV D WRV + +A + K+L F+ +I+H+ RE+
Sbjct: 106 YAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREY 165
Query: 811 NSEADAQANRAVNLADGQIQCES 879
NS ADAQAN AV L G++Q +S
Sbjct: 166 NSAADAQANFAVELPVGEVQEQS 188
>gi|195627916|gb|ACG35788.1| retrotransposon protein Ty3-gypsy subclass [Zea
mays]
Length = 336
Score = 161 bits (406), Expect = 2e-037
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGAS+GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 191 SHLSCILEFDGASKGNPGKAGAGAIIRQV-DGSVIAQLREGLGIATNNAAEYRALILGLT 249
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ +R +GDS LVCNQV D WRV + +A + K+L F+ +I+H+ RE+
Sbjct: 250 YAAKKGFKYIRAQGDSKLVCNQVQDIWRVKNDNMASFCKKVKELKGTFHLFQIRHVLREY 309
Query: 811 NSEADAQANRAVNLADGQIQCES 879
NS ADAQAN AV L G++Q +S
Sbjct: 310 NSAADAQANFAVELPVGEVQEQS 332
>gi|255552696|ref|XP_002517391.1| nuclease, putative [Ricinus communis]
Length = 255
Score = 161 bits (406), Expect = 2e-037
Identities = 80/137 (58%), Positives = 108/137 (78%), Gaps = 1/137 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+C +EFDGAS+GNPG AGAGAVLR+ D ++ LR+GLG ATNNVAEYRA+ILGL++AL
Sbjct: 114 SCILEFDGASKGNPGPAGAGAVLRA-EDGSMVCLLREGLGTATNNVAEYRAVILGLKHAL 172
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
KGF+++R++GDS LV Q+ W++ +A+L + AK+L ++F S +I+H+ REFNSE
Sbjct: 173 RKGFKHIRVRGDSNLVVMQIKGLWKIKSQNVADLCKEAKELKNKFLSFQIEHVLREFNSE 232
Query: 820 ADAQANRAVNLADGQIQ 870
AD QAN AVNL DGQI+
Sbjct: 233 ADTQANLAVNLKDGQIE 249
>gi|224077608|ref|XP_002305325.1| predicted protein [Populus trichocarpa]
Length = 257
Score = 159 bits (402), Expect = 7e-037
Identities = 82/150 (54%), Positives = 109/150 (72%), Gaps = 6/150 (4%)
Frame = +1
Query: 436 PPRNFAQ-----VACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVA 600
PP+ Q +C +EFDGAS+GNPG AGAGAVLR+ D ++ LR+GLGIATNNVA
Sbjct: 103 PPKRLPQPLESIPSCILEFDGASKGNPGPAGAGAVLRA-EDGSMVCRLREGLGIATNNVA 161
Query: 601 EYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNS 780
EYRA++LGL++AL KGF+ + ++GDS LVC Q+ W++ + LA+L + AK+L F S
Sbjct: 162 EYRAVLLGLKHALKKGFKYICVQGDSNLVCMQIQGLWKLKNQNLADLCKEAKELKDMFTS 221
Query: 781 CRIQHIGREFNSEADAQANRAVNLADGQIQ 870
+I+H+ REFN EAD QAN A NL DGQI+
Sbjct: 222 FQIKHVPREFNFEADVQANLAANLRDGQIE 251
>gi|326488477|dbj|BAJ93907.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 266
Score = 159 bits (402), Expect = 7e-037
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGA +GNPGK+GAG V+R + D ++ LR+GLGIATNN AEYRAL+LGL
Sbjct: 121 SHLSCILEFDGACKGNPGKSGAGVVVRRS-DGAMIAQLREGLGIATNNAAEYRALLLGLR 179
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ VR +GDS LVCNQV D WRV + +A+L + KDL F +I H+ REF
Sbjct: 180 YAAKKGFKYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDLKGSFLQFQINHVLREF 239
Query: 811 NSEADAQANRAVNLADGQIQCES 879
N++ADAQAN AV L G+IQ +S
Sbjct: 240 NADADAQANFAVELPVGEIQEQS 262
>gi|326499834|dbj|BAJ90752.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 347
Score = 159 bits (402), Expect = 7e-037
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGA +GNPGK+GAG V+R + D ++ LR+GLGIATNN AEYRAL+LGL
Sbjct: 202 SHLSCILEFDGACKGNPGKSGAGVVVRRS-DGAMIAQLREGLGIATNNAAEYRALLLGLR 260
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ VR +GDS LVCNQV D WRV + +A+L + KDL F +I H+ REF
Sbjct: 261 YAAKKGFKYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDLKGSFLQFQINHVLREF 320
Query: 811 NSEADAQANRAVNLADGQIQCES 879
N++ADAQAN AV L G+IQ +S
Sbjct: 321 NADADAQANFAVELPVGEIQEQS 343
>gi|326505852|dbj|BAJ91165.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 266
Score = 159 bits (402), Expect = 7e-037
Identities = 81/143 (56%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGA +GNPGK+GAG V+R + D ++ LR+GLGIATNN AEYRAL+LGL
Sbjct: 121 SHLSCILEFDGACKGNPGKSGAGVVVRRS-DGAMIAQLREGLGIATNNAAEYRALLLGLR 179
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ VR +GDS LVCNQV D WRV + +A+L + KDL F +I H+ REF
Sbjct: 180 YAAKKGFKYVRAQGDSKLVCNQVQDLWRVRNDNMADLCKKVKDLKGSFLQFQINHVLREF 239
Query: 811 NSEADAQANRAVNLADGQIQCES 879
N++ADAQAN AV L G+IQ +S
Sbjct: 240 NADADAQANFAVELPVGEIQEQS 262
>gi|242081781|ref|XP_002445659.1| hypothetical protein SORBIDRAFT_07g023590
[Sorghum bicolor]
Length = 268
Score = 159 bits (401), Expect = 9e-037
Identities = 82/143 (57%), Positives = 105/143 (73%), Gaps = 1/143 (0%)
Frame = +1
Query: 451 AQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLE 630
+ ++C +EFDGAS+GNPGKAGAGA++R D V+ LR+GLGIATNN AEYRALILGL
Sbjct: 123 SHLSCILEFDGASKGNPGKAGAGAIIRRI-DGSVIAQLREGLGIATNNAAEYRALILGLT 181
Query: 631 YALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREF 810
YA KGF+ +R +GDS LVCNQV D WRV + +A L + K L F+ +I+H+ RE+
Sbjct: 182 YAAKKGFKYIRAQGDSKLVCNQVQDLWRVKNENMAGLCKKVKVLKGTFHLFQIRHVLREY 241
Query: 811 NSEADAQANRAVNLADGQIQCES 879
NS ADAQAN AV L G++Q +S
Sbjct: 242 NSAADAQANFAVELPVGEVQEQS 264
>gi|334182806|ref|NP_173819.2| RNase H domain-containing protein [Arabidopsis
thaliana]
Length = 353
Score = 158 bits (398), Expect = 2e-036
Identities = 80/164 (48%), Positives = 115/164 (70%), Gaps = 7/164 (4%)
Frame = +1
Query: 379 IYWNPETKVAQYERPTYPPPPRNFAQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLF 558
I ++P K+++ E Y + C IEFDGAS+GNPG +GA AVL+ T D ++
Sbjct: 195 ISYDPLEKLSKVEPSAY------ISDETCFIEFDGASKGNPGLSGAAAVLK-TEDGSLIC 247
Query: 559 YLRQGLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAE 738
+RQGLGIATNN AEY ALILGL+YA++KG++N+++KGDS LVC Q+ +W+VNH LA+
Sbjct: 248 RVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQIKGQWKVNHEVLAK 307
Query: 739 LNEYAKDLMSRFNSCRIQHIGREFNSEADAQANRAVNLADGQIQ 870
L++ AK L ++ S I H+ R N++AD QAN AV L +G+++
Sbjct: 308 LHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVRLPEGEVE 351
>gi|212275993|ref|NP_001130760.1| hypothetical protein LOC100191864 [Zea mays]
Length = 292
Score = 152 bits (382), Expect = 1e-034
Identities = 78/139 (56%), Positives = 98/139 (70%), Gaps = 2/139 (1%)
Frame = +1
Query: 469 IEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYALDKG 648
+ FDGAS+GNPGKAGAGAVL T D RV+ LR+GLG+ATNNVAEYR LILGL+YA+ G
Sbjct: 154 LHFDGASKGNPGKAGAGAVL-MTEDGRVISRLREGLGVATNNVAEYRGLILGLKYAIRHG 212
Query: 649 FRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSEADA 828
F+ +++ GDS LVCNQV W+ P + EL A+ L F+S I H+ RE+N+EAD
Sbjct: 213 FKRIKVHGDSQLVCNQVNGVWQTKQPNMMELCTEARKLKENFHSFEIIHVRREWNAEADR 272
Query: 829 QANRAVNLADGQIQCESRG 885
QAN + LA G + E RG
Sbjct: 273 QANIGITLASGAV-FEERG 290
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,082,162,389,562
Number of Sequences: 15229318
Number of Extensions: 1082162389562
Number of Successful Extensions: 318215502
Number of sequences better than 0.0: 0
|
