BLASTX 7.6.2
Query= UN09403 /QuerySize=1103
(1102 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containi... 192 5e-049
TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containi... 192 5e-049
TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containi... 150 2e-036
TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containi... 150 2e-036
TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containi... 150 2e-036
TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containi... 148 8e-036
TAIR9_protein||AT3G12145.1 | Symbols: FLR1, FLOR1 | FLR1; enzyme... 95 8e-020
TAIR9_protein||AT5G06860.1 | Symbols: PGIP1, ATPGIP1 | PGIP1 (PO... 64 2e-010
TAIR9_protein||AT5G06870.1 | Symbols: PGIP2, ATPGIP2 | PGIP2 (PO... 60 3e-009
TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, ... 54 2e-007
TAIR9_protein||AT5G14610.1 | Symbols: | ATP binding / ATP-depen... 50 2e-006
TAIR9_protein||AT3G12610.1 | Symbols: DRT100 | DRT100 (DNA-DAMAG... 50 2e-006
>TAIR9_protein||AT3G01410.1 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 192 bits (486), Expect = 5e-049
Identities = 97/143 (67%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+CTIEFDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 820 ADAQANRAVNLADGQIQCESRG* 888
AD QAN A+ LADGQ Q S G*
Sbjct: 273 ADKQANSAIFLADGQTQVISGG* 295
>TAIR9_protein||AT3G01410.2 | Symbols: | RNase H domain-containing protein |
chr3:153650-155439 REVERSE
Length = 295
Score = 192 bits (486), Expect = 5e-049
Identities = 97/143 (67%), Positives = 115/143 (80%), Gaps = 1/143 (0%)
Frame = +1
Query: 460 ACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRALILGLEYAL 639
+CTIEFDGAS+GNPGKAGAGAVLR++ DN VLFYLR+G+G ATNNVAEYRAL+LGL AL
Sbjct: 154 SCTIEFDGASKGNPGKAGAGAVLRAS-DNSVLFYLREGVGNATNNVAEYRALLLGLRSAL 212
Query: 640 DKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQHIGREFNSE 819
DKGF+NV + GDS+LVC QV W+ NHPK+AEL + AK+LM+ F + I+HI RE NSE
Sbjct: 213 DKGFKNVHVLGDSMLVCMQVQGAWKTNHPKMAELCKQAKELMNSFKTFDIKHIAREKNSE 272
Query: 820 ADAQANRAVNLADGQIQCESRG* 888
AD QAN A+ LADGQ Q S G*
Sbjct: 273 ADKQANSAIFLADGQTQVISGG* 295
>TAIR9_protein||AT5G51080.1 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 150 bits (378), Expect = 2e-036
Identities = 72/145 (49%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Frame = +1
Query: 436 PPRNFAQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 615
P + + C IEFDGAS+GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY L
Sbjct: 177 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 235
Query: 616 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 795
ILGL++A++KG+ +++K DS LVC Q+ +W+VNH L++L++ AK L + S I H
Sbjct: 236 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 295
Query: 796 IGREFNSEADAQANRAVNLADGQIQ 870
+ R NS+AD QAN A L++G+++
Sbjct: 296 VLRSLNSDADEQANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.2 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770675 REVERSE
Length = 323
Score = 150 bits (378), Expect = 2e-036
Identities = 72/145 (49%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Frame = +1
Query: 436 PPRNFAQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 615
P + + C IEFDGAS+GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY L
Sbjct: 177 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 235
Query: 616 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 795
ILGL++A++KG+ +++K DS LVC Q+ +W+VNH L++L++ AK L + S I H
Sbjct: 236 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 295
Query: 796 IGREFNSEADAQANRAVNLADGQIQ 870
+ R NS+AD QAN A L++G+++
Sbjct: 296 VLRSLNSDADEQANMAARLSEGEVE 320
>TAIR9_protein||AT5G51080.3 | Symbols: | RNase H domain-containing protein |
chr5:20769022-20770486 REVERSE
Length = 260
Score = 150 bits (378), Expect = 2e-036
Identities = 72/145 (49%), Positives = 103/145 (71%), Gaps = 1/145 (0%)
Frame = +1
Query: 436 PPRNFAQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLFYLRQGLGIATNNVAEYRAL 615
P + + C IEFDGAS+GNPG +GA AVL+ T D ++F +RQGLGIATNN AEY L
Sbjct: 114 PSADTSYETCIIEFDGASKGNPGLSGAAAVLK-TEDGSLIFKMRQGLGIATNNAAEYHGL 172
Query: 616 ILGLEYALDKGFRNVRIKGDSLLVCNQVLDEWRVNHPKLAELNEYAKDLMSRFNSCRIQH 795
ILGL++A++KG+ +++K DS LVC Q+ +W+VNH L++L++ AK L + S I H
Sbjct: 173 ILGLKHAIEKGYTKIKVKTDSKLVCMQMKGQWKVNHEVLSKLHKEAKQLSDKCLSFEISH 232
Query: 796 IGREFNSEADAQANRAVNLADGQIQ 870
+ R NS+AD QAN A L++G+++
Sbjct: 233 VLRSLNSDADEQANMAARLSEGEVE 257
>TAIR9_protein||AT1G24090.1 | Symbols: | RNase H domain-containing protein |
chr1:8520834-8524690 FORWARD
Length = 536
Score = 148 bits (372), Expect = 8e-036
Identities = 79/161 (49%), Positives = 110/161 (68%), Gaps = 10/161 (6%)
Frame = +1
Query: 379 IYWNPETKVAQYERPTYPPPPRNFAQVACTIEFDGASRGNPGKAGAGAVLRSTHDNRVLF 558
I ++P K+++ E Y + C IEFDGAS+GNPG +GA AVL+ T D ++
Sbjct: 195 ISYDPLEKLSKVEPSAY------ISDETCFIEFDGASKGNPGLSGAAAVLK-TEDGSLIC 247
Query: 559 YLRQGLGIATNNVAEYRALILGLEYALDKGFRNVRIKGDSLLVC---NQVLDEWRVNHPK 729
+RQGLGIATNN AEY ALILGL+YA++KG++N+++KGDS LVC Q+ +W+VNH
Sbjct: 248 RVRQGLGIATNNAAEYHALILGLKYAIEKGYKNIKVKGDSKLVCMQKQQIKGQWKVNHEV 307
Query: 730 LAELNEYAKDLMSRFNSCRIQHIGREFNSEADAQANRAVNL 852
LA+L++ AK L ++ S I H+ R N++AD QAN AV L
Sbjct: 308 LAKLHKEAKLLCNKCVSFEISHVLRNLNADADEQANLAVRL 348
>TAIR9_protein||AT3G12145.1 | Symbols: FLR1, FLOR1 | FLR1; enzyme inhibitor/
transcription factor binding | chr3:3874764-3876075 REVERSE
Length = 326
Score = 95 bits (234), Expect = 8e-020
Identities = 42/67 (62%), Positives = 52/67 (77%)
Frame = +2
Query: 26 LLLCLSILFISLPSSYSCNSKEEHTLLQIKKSFNNPDLLATWSPGTDCCTSWTGIECTNG 205
L + SILFI+LPSSYSC +++ LLQIKK+ NP LL++W+P TDCCT WTG+ECTN
Sbjct: 7 LSIFFSILFITLPSSYSCTENDKNALLQIKKALGNPPLLSSWNPRTDCCTGWTGVECTNR 66
Query: 206 RVTLLCV 226
RVT L V
Sbjct: 67 RVTGLSV 73
>TAIR9_protein||AT5G06860.1 | Symbols: PGIP1, ATPGIP1 | PGIP1 (POLYGALACTURONASE
INHIBITING PROTEIN 1); protein binding | chr5:2132373-2133434 FORWARD
Length = 331
Score = 64 bits (154), Expect = 2e-010
Identities = 36/72 (50%), Positives = 44/72 (61%), Gaps = 8/72 (11%)
Frame = +2
Query: 32 LCLSILFISLPSSYS---CNSKEEHTLLQIKKSFNNPDLLATWSPGTDCCTSWTGIEC-- 196
LCL LF L + S CN +++TLL+IKKS NNP LA+W P TDCC SW +EC
Sbjct: 7 LCLLFLFTFLTTCLSKDLCNQNDKNTLLKIKKSLNNPYHLASWDPQTDCC-SWYCLECGD 65
Query: 197 --TNGRVTLLCV 226
N RVT L +
Sbjct: 66 ATVNHRVTALTI 77
>TAIR9_protein||AT5G06870.1 | Symbols: PGIP2, ATPGIP2 | PGIP2 (POLYGALACTURONASE
INHIBITING PROTEIN 2); protein binding | chr5:2133941-2135016 FORWARD
Length = 331
Score = 60 bits (143), Expect = 3e-009
Identities = 35/75 (46%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Frame = +2
Query: 17 TMKLLLCLSILFISLPSSYS-CNSKEEHTLLQIKKSFNNPDLLATWSPGTDCCTSWTGIE 193
TM L L LS L ++ + C+ ++ TLL+IKKS NNP LA+W P TDCC SW +E
Sbjct: 4 TMTLFLLLSTLLLTTSLAKDLCHKDDKTTLLKIKKSLNNPYHLASWDPKTDCC-SWYCLE 62
Query: 194 C----TNGRVTLLCV 226
C N RVT L +
Sbjct: 63 CGDATVNHRVTSLII 77
>TAIR9_protein||AT3G06480.1 | Symbols: | DEAD box RNA helicase, putative |
chr3:1985697-1989666 REVERSE
Length = 1089
Score = 54 bits (127), Expect = 2e-007
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +1
Query: 328 PSLPQPWELRMD-ANGYDIYWNPETKVAQYERPTYPPP 438
P+LPQPW+ +D + G YWNPET V QYERP+ PPP
Sbjct: 20 PTLPQPWKGLIDGSTGILYYWNPETNVTQYERPSAPPP 57
>TAIR9_protein||AT5G14610.1 | Symbols: | ATP binding / ATP-dependent helicase/
helicase/ nucleic acid binding / protein binding | chr5:4711271-4714713
FORWARD
Length = 713
Score = 50 bits (119), Expect = 2e-006
Identities = 21/40 (52%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Frame = +1
Query: 328 PSLPQPWELRMDA-NGYDIYWNPETKVAQYERPTYPPPPR 444
P+LP+PW+ +D+ GY +WNPET V QYERP PP+
Sbjct: 15 PNLPKPWKGLVDSRTGYLYFWNPETNVTQYERPASSAPPK 54
>TAIR9_protein||AT3G12610.1 | Symbols: DRT100 | DRT100 (DNA-DAMAGE
REPAIR/TOLERATION 100); nucleotide binding / protein binding |
chr3:4006661-4007779 REVERSE
Length = 373
Score = 50 bits (118), Expect = 2e-006
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Frame = +2
Query: 38 LSILFISLPSSYSCNSKEEHTLLQ-IKKSFNNPDL--LATWSPGTDCCTSWTGIEC--TN 202
L+++FIS+ S C S ++ T L K S + P+L TWS TDCC W GI C +
Sbjct: 13 LAVVFISVISVVRCCSPKDQTALNAFKSSLSEPNLGIFNTWSENTDCCKEWYGISCDPDS 72
Query: 203 GRVT 214
GRVT
Sbjct: 73 GRVT 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,257,720,425
Number of Sequences: 33410
Number of Extensions: 5257720425
Number of Successful Extensions: 195094093
Number of sequences better than 0.0: 0
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