BLASTX 7.6.2

Query= UN09434 /QuerySize=1371
        (1370 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G09340.1 | Symbols: CRB, CSP41B | CRB (CHLOROP...    461   7e-130
TAIR9_protein||AT3G63140.1 | Symbols: CSP41A | CSP41A (CHLOROPLA...    159   5e-039

>TAIR9_protein||AT1G09340.1 | Symbols: CRB, CSP41B | CRB (CHLOROPLAST RNA
        BINDING); binding / catalytic/ coenzyme binding | chr1:3015473-3018035
        FORWARD

          Length = 379

 Score =  461 bits (1184), Expect = 7e-130
 Identities = 221/231 (95%), Positives = 224/231 (96%)
 Frame = +2

Query:  527 IRCTPKLEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIR 706
            +   PKLEQYIYCSSAGVYLKSDILPHCE DAVDPKSRHKGKLETESLLQSKGVNWTSIR
Sbjct:  149 LEALPKLEQYIYCSSAGVYLKSDILPHCEEDAVDPKSRHKGKLETESLLQSKGVNWTSIR 208

Query:  707 PVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLGNEKASR 886
            PVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFL VLGNEKASR
Sbjct:  209 PVYIYGPLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLNVLGNEKASR 268

Query:  887 EIFNISGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEK 1066
            EIFNISGEKYVTFDGLA+ACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEK
Sbjct:  269 EIFNISGEKYVTFDGLAKACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEK 328

Query: 1067 AKHVLGWTPEFDLVDGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ* 1219
            AKHVLGW PEFDLV+GLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ*
Sbjct:  329 AKHVLGWKPEFDLVEGLTDSYNLDFGRGTFRKEADFTTDDMILSKKLVLQ* 379


 Score =  274 bits (700), Expect = 1e-073
 Identities = 142/155 (91%), Positives = 147/155 (94%), Gaps = 3/155 (1%)
 Frame = +3

Query:  75 MAKMMMMQQSQPSLSLLTSSLSDFNGAKLNLQVQYKRKVQQPKGALYVSASSEKKILIMG 254
           MAKMMM+QQ QPS SLLTSSLSDFNGAKL+LQVQYKRKV QPKGALYVSASSEKKILIMG
Sbjct:   1 MAKMMMLQQHQPSFSLLTSSLSDFNGAKLHLQVQYKRKVHQPKGALYVSASSEKKILIMG 60

Query: 255 GTRFIGIFLSRLLVKEGHQVTLFTRGKSPIAKQLPGESGQDFADFSSKIFHLKGDRKDYD 434
           GTRFIG+FLSR+LVKEGHQVTLFTRGKSPIAKQLPGES QDFADFSSKI HLKGDRKDYD
Sbjct:  61 GTRFIGLFLSRILVKEGHQVTLFTRGKSPIAKQLPGESDQDFADFSSKILHLKGDRKDYD 120

Query: 435 FVKSSLSSLSAEGFDVVYDINGREAEEVEPILDAL 539
           FVK   SSLSAEGFDVVYDINGREAEEVEPIL+AL
Sbjct: 121 FVK---SSLSAEGFDVVYDINGREAEEVEPILEAL 152

>TAIR9_protein||AT3G63140.1 | Symbols: CSP41A | CSP41A (CHLOROPLAST STEM-LOOP
        BINDING PROTEIN OF 41 KDA); mRNA binding / poly(U) binding |
        chr3:23327006-23328620 REVERSE

          Length = 407

 Score =  159 bits (401), Expect = 5e-039
 Identities = 86/218 (39%), Positives = 123/218 (56%), Gaps = 5/218 (2%)
 Frame = +2

Query:  545 LEQYIYCSSAGVYLKSDILPHCEVDAVDPKSRHKGKLETESLLQSKGVNWTSIRPVYIYG 724
            ++Q+++ SSAG+Y  ++  PH E DAV   + H   +  E  L     NW S RP Y+ G
Sbjct:  184 VKQFLFISSAGIYKSTEQPPHVEGDAVKADAGH---VVVEKYLAETFGNWASFRPQYMIG 240

Query:  725 PLNYNPVEEWFFHRLKAGRPIPVPNSGIQISQLGHVKDLATAFLAVLGN-EKASREIFNI 901
              N    EEWFF R+   R +P+P SG+Q++ + HV+DL++   + + N E AS  IFN 
Sbjct:  241 SGNNKDCEEWFFDRIVRDRAVPIPGSGLQLTNISHVRDLSSMLTSAVANPEAASGNIFNC 300

Query:  902 SGEKYVTFDGLARACAKAGGFPEPEIVHYNPKEFDFGKKKAFPFRDQHFFASVEKAKHVL 1081
              ++ VT DG+A+ CA A G    EIVHY+PK      KKAF FR+ HF+A    AK +L
Sbjct:  301 VSDRAVTLDGMAKLCAAAAG-KTVEIVHYDPKAIGVDAKKAFLFRNMHFYAEPRAAKDLL 359

Query: 1082 GWTPEFDLVDGLTDSYNLDFGRGTFRKEADFTTDDMIL 1195
            GW  + +L + L + +      G  +KE  F  DD IL
Sbjct:  360 GWESKTNLPEDLKERFEEYVKIGRDKKEIKFELDDKIL 397

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,257,720,425
Number of Sequences: 33410
Number of Extensions: 5257720425
Number of Successful Extensions: 195094093
Number of sequences better than 0.0: 0