BLASTX 7.6.2
Query= UN09482 /QuerySize=606
(605 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G04480.1 | Symbols: | 60S ribosomal protein L... 284 4e-077
TAIR9_protein||AT2G33370.1 | Symbols: | 60S ribosomal protein L... 284 4e-077
TAIR9_protein||AT3G04400.1 | Symbols: emb2171 | emb2171 (embryo ... 284 4e-077
TAIR9_protein||ATCG00780.1 | Symbols: RPL14 | encodes a chloropl... 67 6e-012
>TAIR9_protein||AT1G04480.1 | Symbols: | 60S ribosomal protein L23 (RPL23A) |
chr1:1216110-1217257 FORWARD
Length = 141
Score = 284 bits (725), Expect = 4e-077
Identities = 139/141 (98%), Positives = 140/141 (99%)
Frame = +1
Query: 25 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 204
MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 205 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 384
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 385 IGKECADLWPRIASAANAIV* 447
IGKECADLWPRIASAANAIV*
Sbjct: 121 IGKECADLWPRIASAANAIV* 141
>TAIR9_protein||AT2G33370.1 | Symbols: | 60S ribosomal protein L23 (RPL23B) |
chr2:14143718-14144644 REVERSE
Length = 141
Score = 284 bits (725), Expect = 4e-077
Identities = 139/141 (98%), Positives = 140/141 (99%)
Frame = +1
Query: 25 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 204
MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 205 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 384
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 385 IGKECADLWPRIASAANAIV* 447
IGKECADLWPRIASAANAIV*
Sbjct: 121 IGKECADLWPRIASAANAIV* 141
>TAIR9_protein||AT3G04400.1 | Symbols: emb2171 | emb2171 (embryo defective
2171); structural constituent of ribosome | chr3:1167339-1168308
FORWARD
Length = 141
Score = 284 bits (725), Expect = 4e-077
Identities = 139/141 (98%), Positives = 140/141 (99%)
Frame = +1
Query: 25 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 204
MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 205 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 384
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 385 IGKECADLWPRIASAANAIV* 447
IGKECADLWPRIASAANAIV*
Sbjct: 121 IGKECADLWPRIASAANAIV* 141
>TAIR9_protein||ATCG00780.1 | Symbols: RPL14 | encodes a chloroplast ribosomal
protein L14, a constituent of the large subunit of the ribosomal
complex | chrC:80696-81064 REVERSE
Length = 123
Score = 67 bits (163), Expect = 6e-012
Identities = 40/120 (33%), Positives = 69/120 (57%), Gaps = 8/120 (6%)
Frame = +1
Query: 100 VNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDMVMATVKKGKPDL---RKKVMPAVIV 270
+N ADN+GA+ L I + G R A +GD+++A +K+ P+ R +V+ AVIV
Sbjct: 8 LNVADNSGARELMCIRIIGASNR----RYAHIGDVIVAVIKEAIPNTPLERSEVIRAVIV 63
Query: 271 RQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGPIGKECADL-WPRIASAANAIV* 447
R K +R +G + ++DNA V+++ +G KG+ + G I +E L + +I S A ++*
Sbjct: 64 RTCKELKRNNGTIIRYDDNAAVVIDQEGNPKGTRVFGAIPRELRQLNFTKIVSLAPEVL* 123
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,320,152
Number of Sequences: 33410
Number of Extensions: 5302320152
Number of Successful Extensions: 195104914
Number of sequences better than 0.0: 0
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