BLASTX 7.6.2
Query= UN09541 /QuerySize=923
(922 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | ... 542 2e-154
TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; ... 524 4e-149
TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; ... 521 4e-148
TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; ... 414 6e-116
TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB... 410 7e-115
TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB... 410 7e-115
TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1... 410 7e-115
TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; ... 404 6e-113
TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LI... 348 3e-096
TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding... 200 1e-051
TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVE... 199 2e-051
TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll... 135 6e-032
TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding... 97 1e-020
TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll... 89 3e-018
TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll... 89 3e-018
TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment bin... 80 1e-015
TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment bin... 80 1e-015
>TAIR9_protein||AT3G27690.1 | Symbols: LHCB2.4, LHCB2.3, LHCB2 | LHCB2.3;
chlorophyll binding | chr3:10256002-10256921 FORWARD
Length = 267
Score = 542 bits (1394), Expect = 2e-154
Identities = 259/267 (97%), Positives = 262/267 (98%)
Frame = -1
Query: 895 MATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTVKSTPQSIWYGPDRPKYLG 716
MATSAIQHSSFAGQT LKPSNDLLRK+GASNGGGR+ MRRTVKSTPQSIWYGPDRPKYLG
Sbjct: 1 MATSAIQHSSFAGQTTLKPSNDLLRKIGASNGGGRIIMRRTVKSTPQSIWYGPDRPKYLG 60
Query: 715 PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 536
PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS
Sbjct: 61 PFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILS 120
Query: 535 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRIGGG 356
KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMG IEGYRIGGG
Sbjct: 121 KNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFIEGYRIGGG 180
Query: 355 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 176
PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI
Sbjct: 181 PLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPI 240
Query: 175 ENLFDHVADPVANNAWAYATNFVPGK* 95
ENLFDH+ADPVANNAWAYATNFVPGK*
Sbjct: 241 ENLFDHIADPVANNAWAYATNFVPGK* 267
>TAIR9_protein||AT2G05100.1 | Symbols: LHCB2.1, LHCB2 | LHCB2.1; chlorophyll
binding | chr2:1823449-1824331 REVERSE
Length = 266
Score = 524 bits (1348), Expect = 4e-149
Identities = 255/266 (95%), Positives = 258/266 (96%), Gaps = 1/266 (0%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTVKSTPQSIWYGPDRPKYLGP 713
ATSAIQ SSFAGQTALKPSN+LLRKVG S GGGRV MRRTVKSTPQSIWYGPDRPKYLGP
Sbjct: 2 ATSAIQQSSFAGQTALKPSNELLRKVGVS-GGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60
Query: 712 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 533
FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK
Sbjct: 61 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120
Query: 532 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRIGGGP 353
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMG IEGYRIGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180
Query: 352 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 173
LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
Query: 172 NLFDHVADPVANNAWAYATNFVPGK* 95
NLFDH+ADPVANNAW+YATNFVPG *
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGN* 266
>TAIR9_protein||AT2G05070.1 | Symbols: LHCB2.2, LHCB2 | LHCB2.2; chlorophyll
binding | chr2:1799436-1800329 REVERSE
Length = 266
Score = 521 bits (1340), Expect = 4e-148
Identities = 253/266 (95%), Positives = 258/266 (96%), Gaps = 1/266 (0%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTVKSTPQSIWYGPDRPKYLGP 713
ATSAIQ SSFAGQTALKPS+DL++KVG GGGRV MRRTVKSTPQSIWYGPDRPKYLGP
Sbjct: 2 ATSAIQQSSFAGQTALKPSSDLIQKVGVL-GGGRVTMRRTVKSTPQSIWYGPDRPKYLGP 60
Query: 712 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 533
FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK
Sbjct: 61 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 120
Query: 532 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRIGGGP 353
NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWA QVVLMG IEGYRIGGGP
Sbjct: 121 NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWAVQVVLMGFIEGYRIGGGP 180
Query: 352 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 173
LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE
Sbjct: 181 LGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIE 240
Query: 172 NLFDHVADPVANNAWAYATNFVPGK* 95
NLFDH+ADPVANNAW+YATNFVPGK*
Sbjct: 241 NLFDHLADPVANNAWSYATNFVPGK* 266
>TAIR9_protein||AT2G34420.1 | Symbols: LHB1B2, LHCB1.5 | LHB1B2; chlorophyll
binding | chr2:14522716-14523513 REVERSE
Length = 266
Score = 414 bits (1062), Expect = 6e-116
Identities = 202/270 (74%), Positives = 227/270 (84%), Gaps = 11/270 (4%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTV---KSTPQSIWYGPDRPKY 722
+T A+ +FAG+ ++D+L G GRV MR+TV K S WYG DR KY
Sbjct: 4 STMALSSPAFAGKAVKPAASDVL-------GSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 56
Query: 721 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 542
LGPFS PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+
Sbjct: 57 LGPFSGEPPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 116
Query: 541 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRIG 362
L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA+QV+LMG +EGYR+
Sbjct: 117 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 176
Query: 361 G-GPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 185
G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 177 GDGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 236
Query: 184 GPIENLFDHVADPVANNAWAYATNFVPGK* 95
GP+ENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 237 GPLENLADHLADPVNNNAWAFATNFVPGK* 266
>TAIR9_protein||AT1G29910.1 | Symbols: CAB3, AB180, LHCB1.2 | CAB3 (CHLOROPHYLL
A/B BINDING PROTEIN 3); chlorophyll binding | chr1:10472443-10473246
REVERSE
Length = 268
Score = 410 bits (1053), Expect = 7e-115
Identities = 202/270 (74%), Positives = 225/270 (83%), Gaps = 9/270 (3%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTV---KSTPQSIWYGPDRPKY 722
+T A+ +FAG+ +L G GRV MR+TV K S WYG DR KY
Sbjct: 4 STMALSSPAFAGKAV-----NLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 58
Query: 721 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 542
LGPFS +PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+
Sbjct: 59 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
Query: 541 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRI- 365
L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA+QV+LMG +EGYR+
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 364 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 185
G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 184 GPIENLFDHVADPVANNAWAYATNFVPGK* 95
GPIENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 239 GPIENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29920.1 | Symbols: CAB2, AB165, LHCB1.1 | CAB2 (CHLOROPHYLL
A/B-BINDING PROTEIN 2); chlorophyll binding | chr1:10475089-10475892
REVERSE
Length = 268
Score = 410 bits (1053), Expect = 7e-115
Identities = 202/270 (74%), Positives = 225/270 (83%), Gaps = 9/270 (3%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTV---KSTPQSIWYGPDRPKY 722
+T A+ +FAG+ +L G GRV MR+TV K S WYG DR KY
Sbjct: 4 STMALSSPAFAGKAV-----NLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKY 58
Query: 721 LGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEI 542
LGPFS +PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FPE+
Sbjct: 59 LGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFPEL 118
Query: 541 LSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRI- 365
L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA+QV+LMG +EGYR+
Sbjct: 119 LARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYRVA 178
Query: 364 GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGK 185
G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVTGK
Sbjct: 179 GNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGK 238
Query: 184 GPIENLFDHVADPVANNAWAYATNFVPGK* 95
GPIENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 239 GPIENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT1G29930.1 | Symbols: CAB1, AB140, CAB140, LHCB1.3 | CAB1
(CHLOROPHYLL A/B BINDING PROTEIN 1); chlorophyll binding |
chr1:10478071-10478874 FORWARD
Length = 268
Score = 410 bits (1053), Expect = 7e-115
Identities = 204/272 (75%), Positives = 230/272 (84%), Gaps = 13/272 (4%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTA-LKP-SNDLLRKVGASNGGGRVFMRRTV---KSTPQSIWYGPDRP 728
+T A+ +FAG+ L P ++++L G GRV MR+TV K S WYG DR
Sbjct: 4 STMALSSPAFAGKAVKLSPAASEVL-------GSGRVTMRKTVAKPKGPSGSPWYGSDRV 56
Query: 727 KYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFP 548
KYLGPFS +PSYLTGE+PGDYGWDTAGLSADPETFA+NRELEVIHSRWAMLGALGC FP
Sbjct: 57 KYLGPFSGESPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCVFP 116
Query: 547 EILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYR 368
E+L++NGVKFGEAVWFKAGSQIFS+GGLDYLGNP+L+HAQSILAIWA+QV+LMG +EGYR
Sbjct: 117 ELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGNPSLVHAQSILAIWATQVILMGAVEGYR 176
Query: 367 I-GGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVT 191
+ G GPLGE D LYPGG+FDPL LA DPEAF+ELKVKELKNGRLAMFSMFGFFVQAIVT
Sbjct: 177 VAGNGPLGEAEDLLYPGGSFDPLGLATDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVT 236
Query: 190 GKGPIENLFDHVADPVANNAWAYATNFVPGK* 95
GKGPIENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 237 GKGPIENLADHLADPVNNNAWAFATNFVPGK* 268
>TAIR9_protein||AT2G34430.1 | Symbols: LHB1B1, LHCB1.4 | LHB1B1; chlorophyll
binding | chr2:14524818-14525618 FORWARD
Length = 267
Score = 404 bits (1036), Expect = 6e-113
Identities = 193/239 (80%), Positives = 212/239 (88%), Gaps = 3/239 (1%)
Frame = -1
Query: 802 GGGRVFMRRTVKST--PQSIWYGPDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADP 629
G GR+ MR+ K T S WYG DR KYLGPFS PSYLTGE+PGDYGWDTAGLSADP
Sbjct: 29 GTGRITMRKASKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLTGEFPGDYGWDTAGLSADP 88
Query: 628 ETFAKNRELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGN 449
ETFA+NRELEVIHSRWAMLGALGC FPE+L++NGVKFGEAVWFKAGSQIFS+GGLDYLGN
Sbjct: 89 ETFARNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSDGGLDYLGN 148
Query: 448 PNLIHAQSILAIWASQVVLMGLIEGYRIGG-GPLGEGLDPLYPGGAFDPLNLAEDPEAFS 272
P+L+HAQSILAIWA+QV+LMG +EGYR+ G GPLGE D LYPGG+FDPL LA DPEAF+
Sbjct: 149 PSLVHAQSILAIWATQVILMGAVEGYRVAGDGPLGEAEDLLYPGGSFDPLGLATDPEAFA 208
Query: 271 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPVANNAWAYATNFVPGK* 95
ELKVKELKNGRLAMFSMFGFFVQAIVTGKGP+ENL DH+ADPV NNAWA+ATNFVPGK*
Sbjct: 209 ELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAFATNFVPGK* 267
>TAIR9_protein||AT5G54270.1 | Symbols: LHCB3, LHCB3*1 | LHCB3 (LIGHT-HARVESTING
CHLOROPHYLL B-BINDING PROTEIN 3); structural molecule |
chr5:22038424-22039383 FORWARD
Length = 266
Score = 348 bits (892), Expect = 3e-096
Identities = 181/267 (67%), Positives = 203/267 (76%), Gaps = 13/267 (4%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTVKSTPQSIWYGPDRPKYLGP 713
++S + ++F GQT N L V S G + M +WYGPDR KYLGP
Sbjct: 8 SSSVLTPTTFLGQTKASSFNPLRDVV--SLGSPKYTM-------GNDLWYGPDRVKYLGP 58
Query: 712 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 533
FS TPSYLTGE+PGDYGWDTAGLSADPE FAKNR LEVIH RWAMLGA GC PE+L K
Sbjct: 59 FSVQTPSYLTGEFPGDYGWDTAGLSADPEAFAKNRALEVIHGRWAMLGAFGCITPEVLQK 118
Query: 532 -NGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLIEGYRIGG- 359
V F E VWFKAGSQIFSEGGLDYLGNPNL+HAQSILA+ QV+LMGL+EG+RI G
Sbjct: 119 WVRVDFKEPVWFKAGSQIFSEGGLDYLGNPNLVHAQSILAVLGFQVILMGLVEGFRINGL 178
Query: 358 GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKG 182
+GEG D LYPGG FDPL LA+DP F+ELKVKE+KNGRLAMFSMFGFFVQAIVTGKG
Sbjct: 179 DGVGEGND-LYPGGQYFDPLGLADDPVTFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKG 237
Query: 181 PIENLFDHVADPVANNAWAYATNFVPG 101
P+ENL DH+ +PVANNAWA+AT F PG
Sbjct: 238 PLENLLDHLDNPVANNAWAFATKFAPG 264
>TAIR9_protein||AT1G76570.1 | Symbols: | chlorophyll A-B binding family protein
| chr1:28729132-28730754 FORWARD
Length = 328
Score = 200 bits (507), Expect = 1e-051
Identities = 119/263 (45%), Positives = 152/263 (57%), Gaps = 14/263 (5%)
Frame = -1
Query: 892 ATSAIQHSSFAGQTALKPSNDLLRKVGASNGGGRVFMRRTVKSTPQSIWYGPDRPKYLGP 713
A AI +SS +L+ + +K N F + ++ S WYG +RP++ GP
Sbjct: 62 AVKAIANSSIG--VSLRRRLEEKKKEAVENSSR--FKSKAQEARNDSKWYGKERPRWFGP 117
Query: 712 FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCTFPEILSK 533
+ P YLTGE PGDYG+D AGL D TF K E++H+RWAML ALG PE+
Sbjct: 118 IPYDYPPYLTGELPGDYGFDIAGLGKDRLTFDKYFNFEILHARWAMLAALGALIPEVFDL 177
Query: 532 NGV-KFGEAVWFKAGSQIFSEGGLDYLGNPNL--IHAQSILAIWASQVVLMGLIEGYRIG 362
G F E VW++ G L+YLG P L +Q ++ I QV+LM E R
Sbjct: 178 TGTFHFAEPVWWRVGYSKLQGETLEYLGIPGLHVAGSQGVIVIAICQVLLMVGPEYARYC 237
Query: 361 G----GPLGEGL--DPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQ 203
G PLG L D YPGG FDPLNL+EDP AF +LKVKE+KNGRLAM + GF+ Q
Sbjct: 238 GIEALEPLGIYLPGDINYPGGTLFDPLNLSEDPVAFEDLKVKEIKNGRLAMVAWLGFYAQ 297
Query: 202 AIVTGKGPIENLFDHVADPVANN 134
A TGKGP++NL DHV+DP+ NN
Sbjct: 298 AAFTGKGPVQNLVDHVSDPLHNN 320
>TAIR9_protein||AT4G10340.1 | Symbols: LHCB5 | LHCB5 (LIGHT HARVESTING COMPLEX
OF PHOTOSYSTEM II 5); chlorophyll binding | chr4:6408200-6409496
FORWARD
Length = 281
Score = 199 bits (505), Expect = 2e-051
Identities = 110/209 (52%), Positives = 134/209 (64%), Gaps = 9/209 (4%)
Frame = -1
Query: 748 WYGPDRPKYLGP---FSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWA 578
WYGPDR +L P YL GE GDYG+D GL PE FAK + E+IH+RWA
Sbjct: 62 WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFELIHARWA 121
Query: 577 MLGALGCTFPEILSKNGVKFG-EAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQ 401
MLGA G PE L+K G G EAVWFK G+ + L+Y G I +LA+ ++
Sbjct: 122 MLGAAGFIIPEALNKYGANCGPEAVWFKTGALLLDGNTLNYFGKN--IPINLVLAV-VAE 178
Query: 400 VVLMGLIEGYRIGGGPLGEGLDPLYPGGAFDPLNLAEDPEAFSELKVKELKNGRLAMFSM 221
VVL+G E YRI G E D L+PGG FDPL LA+DPE + LKVKE+KNGRLAMF+M
Sbjct: 179 VVLLGGAEYYRITNGLDFE--DKLHPGGPFDPLGLAKDPEQGALLKVKEIKNGRLAMFAM 236
Query: 220 FGFFVQAIVTGKGPIENLFDHVADPVANN 134
GFF+QA VTG+GP+ENL H++DP NN
Sbjct: 237 LGFFIQAYVTGEGPVENLAKHLSDPFGNN 265
>TAIR9_protein||AT3G61470.1 | Symbols: LHCA2 | LHCA2; chlorophyll binding |
chr3:22745736-22747032 FORWARD
Length = 258
Score = 135 bits (338), Expect = 6e-032
Identities = 81/205 (39%), Positives = 108/205 (52%), Gaps = 16/205 (7%)
Frame = -1
Query: 739 PDRPKYLGPFSENTPSYLTGEYPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 560
PDRP + P +L G PGD+G+D GLS+DP++ N + E++H RWAMLGA G
Sbjct: 50 PDRPIWFP--GSTPPEWLDGSLPGDFGFDPLGLSSDPDSLKWNVQAEIVHCRWAMLGAAG 107
Query: 559 CTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWASQVVLMGLI 380
PE L+K G+ W+ AG Q + + L + IL WA +I
Sbjct: 108 IFIPEFLTKIGI-LNTPSWYTAGEQEY------FTDKTTLFVVELILIGWAEGRRWADII 160
Query: 379 EGYRIGGGPLG-----EGLDPLYPGGA-FDPLNLAE-DPEAFSELKVKELKNGRLAMFSM 221
+ + P+ G D YPGG FDPL P EL+ KE+KNGRLAM ++
Sbjct: 161 KPGSVNTDPVFPNNKLTGTDVGYPGGLWFDPLGWGSGSPAKLKELRTKEIKNGRLAMLAV 220
Query: 220 FGFFVQAIVTGKGPIENLFDHVADP 146
G + Q I TG GPI+NLF H+ADP
Sbjct: 221 MGAWFQHIYTGTGPIDNLFAHLADP 245
>TAIR9_protein||AT5G01530.1 | Symbols: | chlorophyll A-B binding protein CP29
(LHCB4) | chr5:209084-210243 FORWARD
Length = 291
Score = 97 bits (241), Expect = 1e-020
Identities = 67/160 (41%), Positives = 88/160 (55%), Gaps = 21/160 (13%)
Frame = -1
Query: 610 RELEVIHSRWAMLGALGCTFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHA 431
RE E+IH RWAML LG E L+ GV W AG +G YLG P
Sbjct: 137 RECELIHGRWAMLATLGALSVEWLT--GV-----TWQDAGKVELVDGS-SYLGQPLPFSI 188
Query: 430 QSILAIWASQVVLMGLIEGYRIGGGPLGEGLDP---LYPGGA-FDPLNLAEDPEAFSELK 263
+++ I +V+++G IE R LD LYPGG FDPL LA DPE ++L+
Sbjct: 189 STLIWI---EVLVIGYIEFQR------NAELDSEKRLYPGGKFFDPLGLAADPEKTAQLQ 239
Query: 262 VKELKNGRLAMFSMFGFFVQAIVTGKGPIENLFDHVADPV 143
+ E+K+ RLAM + GF VQA TGKGP+ N H++DP+
Sbjct: 240 LAEIKHARLAMVAFLGFAVQAAATGKGPLNNWATHLSDPL 279
>TAIR9_protein||AT1G61520.1 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700152-22701149 FORWARD
Length = 274
Score = 89 bits (219), Expect = 3e-018
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = -1
Query: 358 GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKG 182
G G G +P YPGG F+PL +D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG G
Sbjct: 191 GLAGSG-NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 249
Query: 181 PIENLFDHVADPVANN 134
P +NL DH+ADPV NN
Sbjct: 250 PYQNLLDHLADPVNNN 265
>TAIR9_protein||AT1G61520.2 | Symbols: LHCA3 | LHCA3; chlorophyll binding |
chr1:22700493-22701149 FORWARD
Length = 219
Score = 89 bits (219), Expect = 3e-018
Identities = 42/76 (55%), Positives = 56/76 (73%), Gaps = 2/76 (2%)
Frame = -1
Query: 358 GPLGEGLDPLYPGGA-FDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKG 182
G G G +P YPGG F+PL +D ++ ELK+KE+KNGRLAM ++ G+F+Q +VTG G
Sbjct: 136 GLAGSG-NPAYPGGPFFNPLGFGKDEKSLKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 194
Query: 181 PIENLFDHVADPVANN 134
P +NL DH+ADPV NN
Sbjct: 195 PYQNLLDHLADPVNNN 210
>TAIR9_protein||AT1G45474.1 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 80 bits (197), Expect = 1e-015
Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -1
Query: 346 EGLDPLYPGG-AFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 170
EGL+P YPGG +PL LA+D + + K+KE+KNGRLAM +M GFFVQA VT GPI+N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 169 LFDHVADP 146
L +H+++P
Sbjct: 235 LVEHLSNP 242
>TAIR9_protein||AT1G45474.2 | Symbols: LHCA5 | LHCA5; pigment binding |
chr1:17179353-17180439 FORWARD
Length = 257
Score = 80 bits (197), Expect = 1e-015
Identities = 39/68 (57%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Frame = -1
Query: 346 EGLDPLYPGG-AFDPLNLAEDPEAFSELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIEN 170
EGL+P YPGG +PL LA+D + + K+KE+KNGRLAM +M GFFVQA VT GPI+N
Sbjct: 175 EGLEPGYPGGPLLNPLGLAKDVQNAHDWKLKEIKNGRLAMMAMLGFFVQASVTHTGPIDN 234
Query: 169 LFDHVADP 146
L +H+++P
Sbjct: 235 LVEHLSNP 242
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,320,152
Number of Sequences: 33410
Number of Extensions: 5302320152
Number of Successful Extensions: 195104914
Number of sequences better than 0.0: 0
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