BLASTX 7.6.2
Query= UN09551 /QuerySize=873
(872 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S... 408 3e-114
TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S... 240 9e-064
>TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S8 (RPS8A) |
chr5:6851695-6853012 REVERSE
Length = 223
Score = 408 bits (1047), Expect = 3e-114
Identities = 206/227 (90%), Positives = 211/227 (92%), Gaps = 4/227 (1%)
Frame = -1
Query: 821 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 642
MGISRDSIHKRRATGGKQK WRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 641 LDTGNYSWGSEAVTRKTRVLDVVYNAPNNELARTKTLVKSAIVQVDAAPFKQWYLQHYGV 462
LDTGNYSWGSEA TRKTRVLDVVYNA NNEL RTKTLVKSAIVQVDAAPFKQWYL HYGV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIVQVDAAPFKQWYLSHYGV 120
Query: 461 EVGRKKKSAVAAAKKDGEEGDEAAPAAAAAPEETKKSNHVLRKIESRQEGRSLDCHIEDQ 282
E+GRKKKSA ++ KKDGEEG+E AA AAPEE KKSNH+LRKI SRQEGRSLD HIEDQ
Sbjct: 121 ELGRKKKSA-SSTKKDGEEGEE---AAVAAPEEVKKSNHLLRKIASRQEGRSLDSHIEDQ 176
Query: 281 FASGRLLACISSRPGQCGRADGYILEGKELEFYQKKIQKKKGKGAA* 141
FASGRLLACISSRPGQCGRADGYILEGKELEFY KKIQKKKGKGAA*
Sbjct: 177 FASGRLLACISSRPGQCGRADGYILEGKELEFYMKKIQKKKGKGAA* 223
>TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S8 (RPS8B) |
chr5:23902626-23903670 REVERSE
Length = 211
Score = 240 bits (612), Expect = 9e-064
Identities = 116/135 (85%), Positives = 124/135 (91%)
Frame = -1
Query: 821 MGISRDSIHKRRATGGKQKGWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 642
MGISRDSIHKRRATGGKQK WRKKRKYE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 641 LDTGNYSWGSEAVTRKTRVLDVVYNAPNNELARTKTLVKSAIVQVDAAPFKQWYLQHYGV 462
LDTGN+SWGSEAVTRKTR+LDV YNA NNEL RT+TLVKSAIVQVDAAPFKQ YLQHYGV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIVQVDAAPFKQGYLQHYGV 120
Query: 461 EVGRKKKSAVAAAKK 417
++GRKKK ++
Sbjct: 121 DIGRKKKGEAVTTEE 135
Score = 133 bits (333), Expect = 2e-031
Identities = 62/78 (79%), Positives = 69/78 (88%)
Frame = -1
Query: 380 AAAPEETKKSNHVLRKIESRQEGRSLDCHIEDQFASGRLLACISSRPGQCGRADGYILEG 201
A EE KKSNHV RK+E RQEGR+LD H+E+QF+SGRLLACI+SRPGQCGRADGYILEG
Sbjct: 130 AVTTEEVKKSNHVQRKLEMRQEGRALDSHLEEQFSSGRLLACIASRPGQCGRADGYILEG 189
Query: 200 KELEFYQKKIQKKKGKGA 147
KELEFY KK+QKKKGK A
Sbjct: 190 KELEFYMKKLQKKKGKNA 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,320,152
Number of Sequences: 33410
Number of Extensions: 5302320152
Number of Successful Extensions: 195104914
Number of sequences better than 0.0: 0
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