Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN09558


BLASTX 7.6.2

Query= UN09558 /QuerySize=1400
        (1399 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297802828|ref|XP_002869298.1| hypothetical protein ARALYDRAFT...    236   8e-060
gi|15236646|ref|NP_194930.1| uncharacterized protein [Arabidopsi...    231   3e-058
gi|14326506|gb|AAK60298.1|AF385706_1 AT4g32020/F10N7_170 [Arabid...    228   2e-057
gi|15224695|ref|NP_180097.1| uncharacterized protein [Arabidopsi...    100   9e-019
gi|255548804|ref|XP_002515458.1| conserved hypothetical protein ...     92   2e-016
gi|297821915|ref|XP_002878840.1| hypothetical protein ARALYDRAFT...     85   2e-014
gi|27808508|gb|AAO24534.1| At2g25250 [Arabidopsis thaliana]             58   4e-006

>gi|297802828|ref|XP_002869298.1| hypothetical protein ARALYDRAFT_491533
        [Arabidopsis lyrata subsp. lyrata]

          Length = 183

 Score =  236 bits (601), Expect = 8e-060
 Identities = 126/171 (73%), Positives = 138/171 (80%), Gaps = 12/171 (7%)
 Frame = +3

Query: 120 MGVAVLNPQDCLKQPFSHMKYPRNHTVSCPNRQKKPVS-NRTRRSPPRNQTTR---SPPK 287
           MGVAVLNPQDCLK PFSHMK+ RN + +CPN+QKKPVS NRTRRSPPRNQ+TR   SPP 
Sbjct:   1 MGVAVLNPQDCLKDPFSHMKHHRNPS-ACPNKQKKPVSNNRTRRSPPRNQSTRSSPSPPP 59

Query: 288 APPPPPPQRSAVSSYVPKGTVKKSP----IAGQVRILKRGEEIPKKTADLVVEKPDLVST 455
             PP PP R+AVS++VPK TVKKSP    +  QVRILKRGEEIPK+ +DL VE  DL ST
Sbjct:  60 VAPPLPPPRAAVSAFVPKRTVKKSPSNTVVVSQVRILKRGEEIPKEASDLAVEMSDLGST 119

Query: 456 QRIGPDPCLIPSQIRLSDRKSKKATVPPFYAGPVTMASPPPSDVPLPAFFT 608
           +RIGPDP LIPSQIRLS  KSK A   PFYAGPVTM SPPPSDVPLPAFFT
Sbjct: 120 RRIGPDPGLIPSQIRLSGHKSKSA---PFYAGPVTMTSPPPSDVPLPAFFT 167

>gi|15236646|ref|NP_194930.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 181

 Score =  231 bits (587), Expect = 3e-058
 Identities = 127/170 (74%), Positives = 139/170 (81%), Gaps = 12/170 (7%)
 Frame = +3

Query: 120 MGVAVLNPQDCLKQPFSHMKYPRNHTVSCPNRQKKPVS-NRTRRSPPRNQTTR--SPPKA 290
           MGVAVLNPQDCLK PFSHMK  RN + +CPNRQKK VS NRTRRSPPR+Q++R  SPP A
Sbjct:   1 MGVAVLNPQDCLKDPFSHMKQHRNPS-ACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVA 59

Query: 291 PPPPPPQRSAVSSYVPKGTVKKS----PIAGQVRILKRGEEIPKKTADLVVEKPDLVSTQ 458
           PP PPP R+AVS++VPKGT+KKS        QVRILKRGEEIPK+T+DLVVE  DL ST+
Sbjct:  60 PPLPPP-RAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGEEIPKETSDLVVEMSDLGSTR 118

Query: 459 RIGPDPCLIPSQIRLSDRKSKKATVPPFYAGPVTMASPPPSDVPLPAFFT 608
           RIGPDP LIP QIRLS RKSK A   PFYAGPVTM SPPPSDVPLPAFFT
Sbjct: 119 RIGPDPGLIPGQIRLSGRKSKSA---PFYAGPVTMTSPPPSDVPLPAFFT 165

>gi|14326506|gb|AAK60298.1|AF385706_1 AT4g32020/F10N7_170 [Arabidopsis
        thaliana]

          Length = 181

 Score =  228 bits (581), Expect = 2e-057
 Identities = 126/170 (74%), Positives = 138/170 (81%), Gaps = 12/170 (7%)
 Frame = +3

Query: 120 MGVAVLNPQDCLKQPFSHMKYPRNHTVSCPNRQKKPVS-NRTRRSPPRNQTTR--SPPKA 290
           MGVAVLNPQDCLK PFSHMK  RN + +CPNRQKK VS NRTRRSPPR+Q++R  SPP A
Sbjct:   1 MGVAVLNPQDCLKDPFSHMKQHRNPS-ACPNRQKKTVSNNRTRRSPPRSQSSRSSSPPVA 59

Query: 291 PPPPPPQRSAVSSYVPKGTVKKS----PIAGQVRILKRGEEIPKKTADLVVEKPDLVSTQ 458
           PP PPP R+AVS++VPKGT+KKS        QVRILKRGEEIPK+T+DLVVE  DL ST+
Sbjct:  60 PPLPPP-RAAVSAFVPKGTLKKSLSNTVAVSQVRILKRGEEIPKETSDLVVEMSDLGSTR 118

Query: 459 RIGPDPCLIPSQIRLSDRKSKKATVPPFYAGPVTMASPPPSDVPLPAFFT 608
           RIGPDP LIP QI LS RKSK A   PFYAGPVTM SPPPSDVPLPAFFT
Sbjct: 119 RIGPDPGLIPGQISLSGRKSKSA---PFYAGPVTMTSPPPSDVPLPAFFT 165

>gi|15224695|ref|NP_180097.1| uncharacterized protein [Arabidopsis thaliana]

          Length = 155

 Score =  100 bits (247), Expect = 9e-019
 Identities = 65/141 (46%), Positives = 81/141 (57%), Gaps = 13/141 (9%)
 Frame = +3

Query: 267 TTRSPPKAPPPPPPQRSAVSSYVPKGTVKKSPIA-----GQVRILKRGEEIPKKTADLVV 431
           T  SPP     P   R   S    +  +   P +       VRILKRGE+I  K   + +
Sbjct:  18 TNTSPPLRHKKPITNRRRRSPSSHQSQISHPPPSPHNHTNHVRILKRGEDINVK---IPI 74

Query: 432 EKPDLVSTQRIGPDPCLIPSQIRLSDRKSKKATVPPFYAGPVTMASPPPSDVPLPAFFTT 611
           EKPDL S ++IG DP  I + IR+S+RKS  A    FYAGPVT  SPPPS+VPLPAFF  
Sbjct:  75 EKPDLKSNRQIGSDPMKISTPIRISNRKSMPAL---FYAGPVTSTSPPPSEVPLPAFF-- 129

Query: 612 TKKSVSLFQAAEATNRLISIL 674
             K+V+ F+  +ATN LI IL
Sbjct: 130 ANKTVAGFKPTDATNDLIKIL 150

>gi|255548804|ref|XP_002515458.1| conserved hypothetical protein [Ricinus
        communis]

          Length = 189

 Score =  92 bits (226), Expect = 2e-016
 Identities = 70/195 (35%), Positives = 93/195 (47%), Gaps = 19/195 (9%)
 Frame = +3

Query: 120 MGVAVLNPQDCLKQPFSHMK-----YPRNHTVSCPNRQKKPVSNRTRRSPPRNQTTRSPP 284
           MGVAVL+PQDCL+ P S  +      PR            P +NR+ R  P N+  RSP 
Sbjct:   1 MGVAVLSPQDCLQNPLSSRRDLISLPPRMKPPPRNPNGPDPKANRSNRPQP-NRRKRSPN 59

Query: 285 KAPPPPPPQRSAVSSYVPKGTVK------KSPIAGQVRILKRGEEIPKKTADLVVEKPDL 446
            +PP        V +    G VK      + P     ++L +  +I  K      +  DL
Sbjct:  60 TSPPSRAAVLPKVVAAPVIGQVKILKRGEQLPKTTPEKVLSQPIKIEMKN-----KYGDL 114

Query: 447 VSTQRIGPDPCLIPSQIRLSDRKSKKATVPPFYAGPVTMASPPPSDVPLPAFFTTTKKSV 626
            STQR+GPDP L+P+  R    +   + V  FYAG   + SPPPS +PLPAFF   KKS 
Sbjct: 115 GSTQRLGPDPELVPTGSRARLTEPDNSKVHGFYAGSAFITSPPPSSLPLPAFF--MKKSA 172

Query: 627 SLFQAAEATNRLISI 671
           S   A     R++ I
Sbjct: 173 SAVDATSDLRRILGI 187

>gi|297821915|ref|XP_002878840.1| hypothetical protein ARALYDRAFT_901149
        [Arabidopsis lyrata subsp. lyrata]

          Length = 137

 Score =  85 bits (209), Expect = 2e-014
 Identities = 58/124 (46%), Positives = 71/124 (57%), Gaps = 17/124 (13%)
 Frame = +3

Query: 300 PPPQRSAVSSYVPKGTVKKSPIAGQVRILKRGEEIPKKTADLVVEKPDLVSTQRIGPDPC 479
           PP  R+ +S   P      +P    VRILK  E+I   T  + +EKPDL   ++IG DP 
Sbjct:  25 PPRHRTPISHPPPPPLNNTNP----VRILKCAEDI---TVKIPIEKPDLKPNRQIGSDPV 77

Query: 480 LIPSQIRLSDRKSKKATVPPFYAGPVTMASPPPSDVPLPAFFTTTKKSVSLFQAAEATNR 659
            I   IR+ +RK   A    FYAGPVT  SPPPS+VPLPAFF   KK+VS     +ATN 
Sbjct:  78 KISDPIRIPNRKLMPAL---FYAGPVTSTSPPPSEVPLPAFF--AKKNVS-----DATND 127

Query: 660 LISI 671
           LI I
Sbjct: 128 LIRI 131

>gi|27808508|gb|AAO24534.1| At2g25250 [Arabidopsis thaliana]

          Length = 121

 Score =  58 bits (138), Expect = 4e-006
 Identities = 29/45 (64%), Positives = 34/45 (75%), Gaps = 2/45 (4%)
 Frame = +3

Query: 540 FYAGPVTMASPPPSDVPLPAFFTTTKKSVSLFQAAEATNRLISIL 674
           FYAGPVT  SPPPS+VPLPAFF    K+V+ F+  +ATN LI IL
Sbjct:  74 FYAGPVTSTSPPPSEVPLPAFF--ANKTVAGFKPTDATNDLIKIL 116

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,096,817,609,653
Number of Sequences: 15229318
Number of Extensions: 1096817609653
Number of Successful Extensions: 326956409
Number of sequences better than 0.0: 0