BLASTX 7.6.2
Query= UN09566 /QuerySize=1511
(1510 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protei... 562 3e-160
TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protei... 524 6e-149
TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CI... 463 1e-130
TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RN... 436 2e-122
TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding... 393 2e-109
TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding... 393 2e-109
TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacti... 350 2e-096
TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTI... 333 3e-091
TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTI... 329 3e-090
TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interac... 301 1e-081
>TAIR9_protein||AT1G32790.1 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875174-11877188 REVERSE
Length = 359
Score = 562 bits (1446), Expect = 3e-160
Identities = 302/361 (83%), Positives = 313/361 (86%), Gaps = 19/361 (5%)
Frame = -3
Query: 1322 MAVVES-AGVAAADSGAVVVQPPP-------TSQDSG----DQSHQSPRIE--LGDQEGL 1185
MAVVE+ A AAD+G VV+QPPP TSQDSG DQ+H S RI+ L +GL
Sbjct: 1 MAVVETGAAATAADAGGVVIQPPPSSPPSSMTSQDSGVSSDDQNHHS-RIDQVLRHDQGL 59
Query: 1184 YSSKIGSHEARSEGSDGGESYKREMRELQELFSKLNPMAAEFVPPSLTKQQAGG--GFFP 1011
Y SKIGSH ARS+G DGGES+KR+MRELQELFSKLNPMA EFVPPSL KQ G G F
Sbjct: 60 Y-SKIGSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFF 118
Query: 1010 SSPASFFPNNGFPPPGNVPL-EVNGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVS 834
+S SFF NNGF GN NGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVS
Sbjct: 119 TSAGSFFRNNGFAGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVS 178
Query: 833 DLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGF 654
DLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGF
Sbjct: 179 DLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGF 238
Query: 653 YPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVF 474
YPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEV+
Sbjct: 239 YPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVY 298
Query: 473 RLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 294
RLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH
Sbjct: 299 RLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 358
Query: 293 * 291
*
Sbjct: 359 * 359
>TAIR9_protein||AT1G32790.2 | Symbols: CID11 | RNA-binding protein, putative |
chr1:11875028-11877188 REVERSE
Length = 407
Score = 524 bits (1349), Expect = 6e-149
Identities = 293/382 (76%), Positives = 307/382 (80%), Gaps = 19/382 (4%)
Frame = -3
Query: 1322 MAVVES-AGVAAADSGAVVVQPPP-------TSQDSG----DQSHQSPRIE--LGDQEGL 1185
MAVVE+ A AAD+G VV+QPPP TSQDSG DQ+H S RI+ L +GL
Sbjct: 1 MAVVETGAAATAADAGGVVIQPPPSSPPSSMTSQDSGVSSDDQNHHS-RIDQVLRHDQGL 59
Query: 1184 YSSKIGSHEARSEGSDGGESYKREMRELQELFSKLNPMAAEFVPPSLTKQQAGG--GFFP 1011
Y SKIGSH ARS+G DGGES+KR+MRELQELFSKLNPMA EFVPPSL KQ G G F
Sbjct: 60 Y-SKIGSHVARSDGVDGGESFKRDMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFF 118
Query: 1010 SSPASFFPNNGFPPPGNVPL-EVNGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVS 834
+S SFF NNGF GN NGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVS
Sbjct: 119 TSAGSFFRNNGFAGTGNGGYGNENGGFRRKKSFGQGKRRMNARTSMAQREDVIRRTVYVS 178
Query: 833 DLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGF 654
DLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGF
Sbjct: 179 DLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGF 238
Query: 653 YPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVF 474
YPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEV+
Sbjct: 239 YPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVY 298
Query: 473 RLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPRHPMH 294
RLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIR S +
Sbjct: 299 RLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRSSFKDACSSEITEASNAL 358
Query: 293 *S*LYTFPHMSLSIYIYVCVCL 228
L F ++ YIY CV L
Sbjct: 359 ILALQVFTYLMSPQYIYRCVVL 380
Score = 73 bits (177), Expect = 5e-013
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = -3
Query: 572 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIA 393
++ RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EF E A+
Sbjct: 169 DVIRRTVYVSDLDQQVTEEQLAGLFVS-CGQVVDCRICGDPNSVLRFAFIEFTDEEGAMT 227
Query: 392 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 309
ALN SG +LG P++V PSKT + P +P
Sbjct: 228 ALNLSGTMLGFYPVKVLPSKTAIAPVNP 255
>TAIR9_protein||AT4G10610.1 | Symbols: RBP37, ATRBP37, CID12 | CID12; RNA
binding | chr4:6557336-6559143 FORWARD
Length = 337
Score = 463 bits (1191), Expect = 1e-130
Identities = 246/340 (72%), Positives = 273/340 (80%), Gaps = 24/340 (7%)
Frame = -3
Query: 1286 DSGAVVVQPPP---TSQDSGDQSHQSPRIELGDQEGLYSSKIGSHEARSEGSDGGESYKR 1116
++G ++ PP TSQ+SG S+ G++ +IG H AR SDGGES+KR
Sbjct: 14 EAGGLISPSPPSSVTSQESGASSNND-----HGGNGIH-DEIGVHVAR---SDGGESFKR 64
Query: 1115 EMRELQELFSKLNPMAAEFVPPSLTKQQA---GGGFFPSSPASFFPNNGFPPPGNVPLEV 945
+MREL EL SKLNPMA EF+PPSLTK GGFF NNGF GN P+
Sbjct: 65 DMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFA-------VNNGFVAAGNFPVNE 117
Query: 944 NGGFRRKKSFG-QGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVV 768
+G FRRKKSFG QGKRRMN RTS+AQRE++IRRTVYVSD+DQQVTEEQLAGLF+ GQVV
Sbjct: 118 DGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVV 177
Query: 767 DCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 588
DCRICGDPNSVLRFAFIEFTDE GA TALNLSGTMLGFYPVKV+PSKTAIAPVNPTFLPR
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPR 237
Query: 587 TEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMA 408
TEDEREMCARTIYCTNIDKK+TQ+D+K+FFES CGEV+RLRLLGDY H TRI FVEFVMA
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMA 297
Query: 407 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRS-PRHPMH* 291
ESAIAALNCSGV+LGSLPIRVSPSKTPVR R+ PRH MH*
Sbjct: 298 ESAIAALNCSGVLLGSLPIRVSPSKTPVRSRAIPRHQMH* 337
>TAIR9_protein||AT4G10610.2 | Symbols: RBP37, ATRBP37 | CID12; RNA binding |
chr4:6557336-6559019 FORWARD
Length = 327
Score = 436 bits (1120), Expect = 2e-122
Identities = 231/320 (72%), Positives = 257/320 (80%), Gaps = 23/320 (7%)
Frame = -3
Query: 1286 DSGAVVVQPPP---TSQDSGDQSHQSPRIELGDQEGLYSSKIGSHEARSEGSDGGESYKR 1116
++G ++ PP TSQ+SG S+ G++ +IG H AR SDGGES+KR
Sbjct: 14 EAGGLISPSPPSSVTSQESGASSNND-----HGGNGIH-DEIGVHVAR---SDGGESFKR 64
Query: 1115 EMRELQELFSKLNPMAAEFVPPSLTKQQA---GGGFFPSSPASFFPNNGFPPPGNVPLEV 945
+MREL EL SKLNPMA EF+PPSLTK GGFF NNGF GN P+
Sbjct: 65 DMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFA-------VNNGFVAAGNFPVNE 117
Query: 944 NGGFRRKKSFG-QGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVV 768
+G FRRKKSFG QGKRRMN RTS+AQRE++IRRTVYVSD+DQQVTEEQLAGLF+ GQVV
Sbjct: 118 DGSFRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGLFIGFGQVV 177
Query: 767 DCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPR 588
DCRICGDPNSVLRFAFIEFTDE GA TALNLSGTMLGFYPVKV+PSKTAIAPVNPTFLPR
Sbjct: 178 DCRICGDPNSVLRFAFIEFTDEVGARTALNLSGTMLGFYPVKVMPSKTAIAPVNPTFLPR 237
Query: 587 TEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMA 408
TEDEREMCARTIYCTNIDKK+TQ+D+K+FFES CGEV+RLRLLGDY H TRI FVEFVMA
Sbjct: 238 TEDEREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMA 297
Query: 407 ESAIAALNCSGVVLGSLPIR 348
ESAIAALNCSGV+LGSLPIR
Sbjct: 298 ESAIAALNCSGVLLGSLPIR 317
>TAIR9_protein||AT3G49390.1 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 393 bits (1008), Expect = 2e-109
Identities = 215/358 (60%), Positives = 254/358 (70%), Gaps = 28/358 (7%)
Frame = -3
Query: 1322 MAVVESAGVAAADSG------------AVVVQPPPTSQDSGDQSHQSPRI------ELGD 1197
MAV E+AGV SG +PP D +S S + E D
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTPETDD 60
Query: 1196 QEGLYSSKIGSHEARSEGSDGGESYKREMRELQELFSKLNPMAAEFVPPSLTKQQAGGGF 1017
+ + K+ + S +G E+++L + FSKLNPMA EFVPPSL + Q+G
Sbjct: 61 RINETAQKVQTLNGFS--GNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARSQSG--- 115
Query: 1016 FPSSPASFFPNNGFPPPGNVPLEVNGGF-RRKKSFGQGKRRMNARTSMAQREDVIRRTVY 840
F NN PP + N F RR++SFGQGKRRMN RTS+AQ++DVIRRTVY
Sbjct: 116 -VLRNGLGFTNNFAAPPKLA--DGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVY 172
Query: 839 VSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTML 660
VSD+DQQVTEE LAG+F++CGQVVDCR+CGDPNSVLRFAFIEFT+EEGA AL++SGT+L
Sbjct: 173 VSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVL 232
Query: 659 GFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGE 480
GFYP+KVLPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K FFE CGE
Sbjct: 233 GFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGE 292
Query: 479 VFRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 306
V RLR LGDY H TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 293 VHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
Score = 71 bits (172), Expect = 2e-012
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = -3
Query: 572 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIA 393
++ RT+Y ++ID++VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 165 DVIRRTVYVSDIDQQVTEENLAGVFIN-CGQVVDCRVCGDPNSVLRFAFIEFTNEEGARA 223
Query: 392 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 309
AL+ SG VLG P++V PSKT + P +P
Sbjct: 224 ALSMSGTVLGFYPLKVLPSKTAIAPVNP 251
>TAIR9_protein||AT3G49390.2 | Symbols: CID10 | CID10; RNA binding / protein
binding | chr3:18314901-18317658 REVERSE
Length = 354
Score = 393 bits (1008), Expect = 2e-109
Identities = 215/358 (60%), Positives = 254/358 (70%), Gaps = 28/358 (7%)
Frame = -3
Query: 1322 MAVVESAGVAAADSG------------AVVVQPPPTSQDSGDQSHQSPRI------ELGD 1197
MAV E+AGV SG +PP D +S S + E D
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTPETDD 60
Query: 1196 QEGLYSSKIGSHEARSEGSDGGESYKREMRELQELFSKLNPMAAEFVPPSLTKQQAGGGF 1017
+ + K+ + S +G E+++L + FSKLNPMA EFVPPSL + Q+G
Sbjct: 61 RINETAQKVQTLNGFS--GNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLARSQSG--- 115
Query: 1016 FPSSPASFFPNNGFPPPGNVPLEVNGGF-RRKKSFGQGKRRMNARTSMAQREDVIRRTVY 840
F NN PP + N F RR++SFGQGKRRMN RTS+AQ++DVIRRTVY
Sbjct: 116 -VLRNGLGFTNNFAAPPKLA--DGNDHFPRRRRSFGQGKRRMNKRTSLAQKDDVIRRTVY 172
Query: 839 VSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTML 660
VSD+DQQVTEE LAG+F++CGQVVDCR+CGDPNSVLRFAFIEFT+EEGA AL++SGT+L
Sbjct: 173 VSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGARAALSMSGTVL 232
Query: 659 GFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGE 480
GFYP+KVLPSKTAIAPVNPTFLPR+EDEREMC RT+YCTNIDK++TQ D+K FFE CGE
Sbjct: 233 GFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQIDLKGFFEMLCGE 292
Query: 479 VFRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPRSPR 306
V RLR LGDY H TRIAFVEF MAESAIAAL+CSG+VLG+LPIRVSPSKTPVRP PR
Sbjct: 293 VHRLR-LGDYHHQTRIAFVEFAMAESAIAALHCSGIVLGALPIRVSPSKTPVRPHFPR 349
Score = 71 bits (172), Expect = 2e-012
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Frame = -3
Query: 572 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIA 393
++ RT+Y ++ID++VT+ ++ F + CG+V R+ GD R AF+EF E A A
Sbjct: 165 DVIRRTVYVSDIDQQVTEENLAGVFIN-CGQVVDCRVCGDPNSVLRFAFIEFTNEEGARA 223
Query: 392 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 309
AL+ SG VLG P++V PSKT + P +P
Sbjct: 224 ALSMSGTVLGFYPLKVLPSKTAIAPVNP 251
>TAIR9_protein||AT3G14450.1 | Symbols: CID9 | CID9 (CTC-Interacting Domain 9);
RNA binding / protein binding | chr3:4849788-4851601 FORWARD
Length = 328
Score = 350 bits (896), Expect = 2e-096
Identities = 188/318 (59%), Positives = 224/318 (70%), Gaps = 15/318 (4%)
Frame = -3
Query: 1235 DQSHQSPRIELGDQEGLYSSKIGSHEARSEGSDGGESYKREMRELQELFSKLNPMAAEFV 1056
D S + E EG+ S I + +E + +M +L +F KLNP+A EF
Sbjct: 16 DVKEVSTKSEKIIDEGIEKSSITDSKTETES-------RLDMHKLVAMFKKLNPLAKEFF 68
Query: 1055 P----PSLTKQQAGGGFFPSSPASFFPNNGFPPPGNVPLEV--NGGFRRKKSFGQGKRRM 894
P P Q A F PA F L+ + R+++++ QG+RR+
Sbjct: 69 PSYYDPKKNNQVAKANQF--LPADDFETTKKQSGEEFDLDAKKDDNTRKRRNYSQGRRRL 126
Query: 893 NARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIE 714
R S AQRED IRRTVYVSD+DQ VTEE LAGLF +CGQVVDCRICGDP+SVLRFAF+E
Sbjct: 127 TGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCGQVVDCRICGDPHSVLRFAFVE 186
Query: 713 FTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNID 534
F D++GA AL+L GTMLGFYPV+VLPSKTAI PVNPTFLPR+EDEREMC RTIYCTNID
Sbjct: 187 FADDQGAHEALSLGGTMLGFYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTIYCTNID 246
Query: 533 KKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLP 354
KKV+Q+DV+ FFES CGEV RLRLLGD HSTRIAFVEF +A+SA++ALNCSG+V+GS P
Sbjct: 247 KKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALSALNCSGMVVGSQP 306
Query: 353 IRVSPSKTPVRPRSPRHP 300
IRVSPSKTPVRPR R P
Sbjct: 307 IRVSPSKTPVRPRITRPP 324
>TAIR9_protein||AT1G53650.1 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 315
Score = 333 bits (852), Expect = 3e-091
Identities = 169/245 (68%), Positives = 195/245 (79%), Gaps = 5/245 (2%)
Frame = -3
Query: 1019 FFPSSPASFFPNNGF----PPPGNVPLEVNGGFRRKKSFGQGKR-RMNARTSMAQREDVI 855
FFPS + ++ F P G +V RR+ ++ QG+R R+ R S AQRED I
Sbjct: 67 FFPSYKRNTNQSDDFVIAIKPSGEDNKKVAINRRRRNNYNQGRRVRLPGRASKAQREDSI 126
Query: 854 RRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNL 675
RRTVYVSD+DQ VTEE LAGLF SCGQVVDCRICGDPNSVLRFAF+EF+D++GA +AL+L
Sbjct: 127 RRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRICGDPNSVLRFAFVEFSDDQGARSALSL 186
Query: 674 SGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFE 495
GTM+G+YPV+VLPSKTAI PVNPTFLPR+EDEREMC+RTIYCTN+DK T+ DV FF+
Sbjct: 187 GGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQ 246
Query: 494 SFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIAALNCSGVVLGSLPIRVSPSKTPVRPR 315
S CGEV RLRLLGD HSTRIAFVEF MAESA+AALNCSG+VLGS PIRVSPSKTPVR R
Sbjct: 247 SACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVAALNCSGIVLGSQPIRVSPSKTPVRSR 306
Query: 314 SPRHP 300
R P
Sbjct: 307 ITRSP 311
>TAIR9_protein||AT1G53650.2 | Symbols: CID8 | CID8 (CTC-INTERACTING DOMAIN 8);
RNA binding / protein binding | chr1:20029262-20031243 REVERSE
Length = 309
Score = 329 bits (843), Expect = 3e-090
Identities = 160/212 (75%), Positives = 183/212 (86%), Gaps = 1/212 (0%)
Frame = -3
Query: 932 RRKKSFGQGKR-RMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRI 756
+R+ ++ QG+R R+ R S AQRED IRRTVYVSD+DQ VTEE LAGLF SCGQVVDCRI
Sbjct: 94 KRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRI 153
Query: 755 CGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDE 576
CGDPNSVLRFAF+EF+D++GA +AL+L GTM+G+YPV+VLPSKTAI PVNPTFLPR+EDE
Sbjct: 154 CGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDE 213
Query: 575 REMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAI 396
REMC+RTIYCTN+DK T+ DV FF+S CGEV RLRLLGD HSTRIAFVEF MAESA+
Sbjct: 214 REMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAV 273
Query: 395 AALNCSGVVLGSLPIRVSPSKTPVRPRSPRHP 300
AALNCSG+VLGS PIRVSPSKTPVR R R P
Sbjct: 274 AALNCSGIVLGSQPIRVSPSKTPVRSRITRSP 305
>TAIR9_protein||AT5G24440.1 | Symbols: CID13 | CID13 (CTC-Interacting Domain
13); RNA binding / nucleic acid binding / nucleotide binding |
chr5:8345402-8347776 REVERSE
Length = 321
Score = 301 bits (769), Expect = 1e-081
Identities = 157/262 (59%), Positives = 198/262 (75%), Gaps = 8/262 (3%)
Frame = -3
Query: 1103 LQELFSKLNPMAAEFVPPSLTKQQAGGGFFPSSPASFFPNNGFPPPGNVPLEVNGGF-RR 927
L+ S LNPMA EFV PS Q F+ + F+ N FP + + G F
Sbjct: 59 LKSEISHLNPMAKEFV-PSFLAQTHHSEFWGN---RFWFTNHFP---KQTIFLIGQFATM 111
Query: 926 KKSFGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGD 747
+++FG+G+ + +T++ Q ED+I+RTVYVSD+D QVTEEQLA LF+SCGQVVDCR+CGD
Sbjct: 112 RRNFGKGRPWITKKTNLVQNEDMIKRTVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGD 171
Query: 746 PNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDEREM 567
S+LRFAFIEFTD EGA +AL SGTM G +P++V SKTAIAPVNP+FLP+++DE E
Sbjct: 172 YKSILRFAFIEFTDAEGARSALRKSGTMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEK 231
Query: 566 CARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIAAL 387
C +T+YCTNIDK+VT+ +++ FF++ CGEV LRLLGD+ H TRIAFVEF +AESAI+AL
Sbjct: 232 CGKTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISAL 291
Query: 386 NCSGVVLGSLPIRVSPSKTPVR 321
NCSGVVLG LPIRVSPSKTPVR
Sbjct: 292 NCSGVVLGELPIRVSPSKTPVR 313
Score = 75 bits (183), Expect = 1e-013
Identities = 40/88 (45%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Frame = -3
Query: 572 EMCARTIYCTNIDKKVTQSDVKIFFESFCGEVFRLRLLGDYQHSTRIAFVEFVMAESAIA 393
+M RT+Y ++ID +VT+ + F S CG+V R+ GDY+ R AF+EF AE A +
Sbjct: 133 DMIKRTVYVSDIDNQVTEEQLASLFLS-CGQVVDCRMCGDYKSILRFAFIEFTDAEGARS 191
Query: 392 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 309
AL SG + GS PIRV SKT + P +P
Sbjct: 192 ALRKSGTMFGSHPIRVFMSKTAIAPVNP 219
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,320,152
Number of Sequences: 33410
Number of Extensions: 5302320152
Number of Successful Extensions: 195104914
Number of sequences better than 0.0: 0
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