BLASTX 7.6.2
Query= UN09569 /QuerySize=1302
(1301 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem... 182 5e-046
TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD pro... 138 1e-032
TAIR9_protein||AT3G21000.1 | Symbols: | unknown protein | chr3:... 116 4e-026
TAIR9_protein||AT3G20980.1 | Symbols: | unknown protein | chr3:... 99 4e-021
>TAIR9_protein||AT3G21055.1 | Symbols: PSBTN | PSBTN (photosystem II subunit T)
| chr3:7376761-7377072 REVERSE
Length = 104
Score = 182 bits (461), Expect = 5e-046
Identities = 94/107 (87%), Positives = 100/107 (93%), Gaps = 3/107 (2%)
Frame = +1
Query: 67 MASMTMTATFLPAVAKLPSATSGRRMSVVRASTSENTPSLEVKAKEEQRSTTMRRDLMFT 246
MASMTMTATF PAVAK+PSAT GRR+SVVRASTS+NTPSLEVK EQ STTMRRDLMFT
Sbjct: 1 MASMTMTATFFPAVAKVPSATGGRRLSVVRASTSDNTPSLEVK---EQSSTTMRRDLMFT 57
Query: 247 AAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 387
AAA+AVC+LAKVAMA+EEEPKRGTEAAKKKYAQVCVTMPTAKICRY*
Sbjct: 58 AAAAAVCSLAKVAMAEEEEPKRGTEAAKKKYAQVCVTMPTAKICRY* 104
>TAIR9_protein||AT1G51400.1 | Symbols: | photosystem II 5 kD protein |
chr1:19052172-19052492 REVERSE
Length = 107
Score = 138 bits (345), Expect = 1e-032
Identities = 76/108 (70%), Positives = 91/108 (84%), Gaps = 6/108 (5%)
Frame = +1
Query: 67 MASMTMTATFLPAVAKLP---SATSGRRMSVVRASTSENTPSLEVKAKEEQRSTTMRRDL 237
MASMTMT++FLP V+ LP S+ S R ++VV+AS SENT SLE K++++S MRRDL
Sbjct: 1 MASMTMTSSFLPTVSNLPANISSNSRRSLTVVKASGSENTTSLE--NKKQEQSMKMRRDL 58
Query: 238 MFTAAASAVCALAKVAMADEEEPKRGTEAAKKKYAQVCVTMPTAKICR 381
+FTAAA+AVC+LAKVAMAD +EPKRGTEAAKKKYA VCVTMPTAKICR
Sbjct: 59 VFTAAAAAVCSLAKVAMAD-DEPKRGTEAAKKKYAPVCVTMPTAKICR 105
>TAIR9_protein||AT3G21000.1 | Symbols: | unknown protein | chr3:7363921-7365138
FORWARD
Length = 406
Score = 116 bits (289), Expect = 4e-026
Identities = 66/129 (51%), Positives = 87/129 (67%), Gaps = 4/129 (3%)
Frame = -3
Query: 1035 GDFTYGEDMWMVYSTAFDHMTPYLKVFSTLDRTYKARVGMANGNVVMAEGKGDVKITMK- 859
G TY +D+W+++ A +MTPY+K F+TLDRT+KA VG +G V++ EGKGDVKI MK
Sbjct: 271 GAKTYDDDIWIIHKMAPINMTPYVKYFTTLDRTFKATVGTVDGTVLLVEGKGDVKIRMKE 330
Query: 858 GVRKLIKNVLFVPGIDRNVLSISKLTSGGGSVVIG-GGECTV--RDENGKVFANTRLEER 688
G +K I+NV+FVPG++RNVLS K+ S S+ G GEC V R EN A +E
Sbjct: 331 GKKKTIRNVIFVPGLNRNVLSFGKMVSKRYSISTGMQGECIVCDRGENKLGDAMWMTDET 390
Query: 687 GIALRFKVI 661
+ALR KVI
Sbjct: 391 EMALRLKVI 399
>TAIR9_protein||AT3G20980.1 | Symbols: | unknown protein | chr3:7355963-7357966
FORWARD
Length = 406
Score = 99 bits (246), Expect = 4e-021
Identities = 61/145 (42%), Positives = 83/145 (57%), Gaps = 9/145 (6%)
Frame = -3
Query: 1074 NGKPEHLMVAVTTGDFTYGEDMWMVYSTAFDHMTPYLKVFSTLDRTYKARVGMANGN--- 904
N P+H VA +T+ E++W++ ST +HMTP++K F+TLDR+ K +V +G+
Sbjct: 249 NEVPDH--VAECFSKYTFHENIWLISSTNSNHMTPHVKFFTTLDRSRKCKVKFISGDKSE 306
Query: 903 --VVMAEGKGDVKITMKGVRKLIKNVLFVPGIDRNVLSISKLTSGGGSVVIGGGE-CTVR 733
V M EG GDV K IKNVL+VPGI+ N LS+S+L G V + C V
Sbjct: 307 TTVAMVEGIGDVTFITNEGNKTIKNVLYVPGIEGNALSVSQLKRNGFEVSMERRTGCFVW 366
Query: 732 DE-NGKVFANTRLEERGIALRFKVI 661
D GK+F E+RG LRF VI
Sbjct: 367 DRTTGKMFGKNMWEKRGFCLRFSVI 391
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,320,152
Number of Sequences: 33410
Number of Extensions: 5302320152
Number of Successful Extensions: 195104914
Number of sequences better than 0.0: 0
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