BLASTX 7.6.2
Query= UN09574 /QuerySize=1095
(1094 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotei... 415 3e-116
TAIR9_protein||AT1G01080.2 | Symbols: | 33 kDa ribonucleoprotei... 410 9e-115
TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRB... 116 3e-026
TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotei... 110 2e-024
TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (... 101 9e-022
TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (... 101 9e-022
TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine... 72 6e-013
TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotei... 70 3e-012
TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP... 68 8e-012
TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 68 8e-012
TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RB... 68 8e-012
TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, pu... 67 1e-011
TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotei... 65 5e-011
TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding /... 65 7e-011
TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding /... 65 7e-011
TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA bin... 61 1e-009
TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-bindin... 61 1e-009
>TAIR9_protein||AT1G01080.1 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 294
Score = 415 bits (1065), Expect = 3e-116
Identities = 227/298 (76%), Positives = 253/298 (84%), Gaps = 18/298 (6%)
Frame = +3
Query: 27 SSSCFAVPL-SSSRSSSNAIPKCQTLI--SPFSYVPSLK---ASTTSFHLSSLSR----Q 176
++SCFA+PL SSSRSS NAIPK +TLI S +SY+ SLK +S+ SFH SSLSR Q
Sbjct: 2 AASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQ 61
Query: 177 RLQLKVFSSSSELSVLDEAKVEEEEVKADGETGEE---TEAEPVVTKKPRPCELYVCNIP 347
LQ+KV SSSELSVLDE K EEE VK + E ++ ++AEPV KKPRPCELYVCNIP
Sbjct: 62 PLQIKV--SSSELSVLDEEK-EEEVVKGEAEPNKDSVVSKAEPV--KKPRPCELYVCNIP 116
Query: 348 RSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGG 527
RSYDI QLLDMFQ FGTVISVEVSRNP+TGESRGSGYVTM SINSAK AIASLDG EVGG
Sbjct: 117 RSYDIAQLLDMFQPFGTVISVEVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVGG 176
Query: 528 REMRVRYSVDMNPGTKRNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFG 707
REMRVRYSVDMNPGT+RN LNSTPKKILMYES +KVYVGNLPW TQPDGLR+HFS+FG
Sbjct: 177 REMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKFG 236
Query: 708 TVVSTRVLHDRKTGKNRVFAFLSFANLEERDAALSLNGTEYEGRRIIVRQGIERTES* 881
T+VSTRVLHDRKTG+NRVFAFLSF + EERDAALS NGT+YEGRRIIVR+GIE++ES*
Sbjct: 237 TIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSES* 294
>TAIR9_protein||AT1G01080.2 | Symbols: | 33 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp33, putative | chr1:45503-46789
REVERSE
Length = 295
Score = 410 bits (1053), Expect = 9e-115
Identities = 227/299 (75%), Positives = 253/299 (84%), Gaps = 19/299 (6%)
Frame = +3
Query: 27 SSSCFAVPL-SSSRSSSNAIPKCQTLI--SPFSYVPSLK---ASTTSFHLSSLSR----Q 176
++SCFA+PL SSSRSS NAIPK +TLI S +SY+ SLK +S+ SFH SSLSR Q
Sbjct: 2 AASCFAIPLSSSSRSSHNAIPKYKTLISSSSYSYLESLKLQFSSSNSFHHSSLSRPFVAQ 61
Query: 177 RLQLKVFSSSSELSVLDEAKVEEEEVKADGETGEE---TEAEPVVTKKPRPCELYVCNIP 347
LQ+KV SSSELSVLDE K EEE VK + E ++ ++AEPV KKPRPCELYVCNIP
Sbjct: 62 PLQIKV--SSSELSVLDEEK-EEEVVKGEAEPNKDSVVSKAEPV--KKPRPCELYVCNIP 116
Query: 348 RSYDITQLLDMFQSFGTVISVE-VSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVG 524
RSYDI QLLDMFQ FGTVISVE VSRNP+TGESRGSGYVTM SINSAK AIASLDG EVG
Sbjct: 117 RSYDIAQLLDMFQPFGTVISVEVVSRNPQTGESRGSGYVTMGSINSAKIAIASLDGTEVG 176
Query: 525 GREMRVRYSVDMNPGTKRNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQF 704
GREMRVRYSVDMNPGT+RN LNSTPKKILMYES +KVYVGNLPW TQPDGLR+HFS+F
Sbjct: 177 GREMRVRYSVDMNPGTRRNPEVLNSTPKKILMYESQHKVYVGNLPWFTQPDGLRNHFSKF 236
Query: 705 GTVVSTRVLHDRKTGKNRVFAFLSFANLEERDAALSLNGTEYEGRRIIVRQGIERTES* 881
GT+VSTRVLHDRKTG+NRVFAFLSF + EERDAALS NGT+YEGRRIIVR+GIE++ES*
Sbjct: 237 GTIVSTRVLHDRKTGRNRVFAFLSFTSGEERDAALSFNGTQYEGRRIIVREGIEKSES* 295
>TAIR9_protein||AT4G24770.1 | Symbols: RBP31, ATRBP31, CP31, ATRBP33 | RBP31
(31-KDA RNA BINDING PROTEIN); RNA binding / poly(U) binding |
chr4:12766223-12767952 REVERSE
Length = 330
Score = 116 bits (290), Expect = 3e-026
Identities = 89/278 (32%), Positives = 145/278 (52%), Gaps = 21/278 (7%)
Frame = +3
Query: 45 VPLSSSRSSSNAIPKCQTLISPF-SYVPSLKASTTSFHLSSLSRQRLQLKVFSSSSELSV 221
+PLS SR S + K SPF S+V S++ + + + S ++S
Sbjct: 52 LPLSFSRVSLSLKTKTHLKKSPFVSFVAQTSDWAEEGGEGSVAVEETENSL--ESQDVSE 109
Query: 222 LDEAKVEEEEVK-ADGETGEETEAEPVVTKK---PRPCE---LYVCNIPRSYDITQLLDM 380
DE++ + E ++G+ E +E V+++ P P E L+V N+ + L +
Sbjct: 110 GDESEGDASEGDVSEGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAML 169
Query: 381 FQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRYSVDM 560
F+ GTV EV N ET +SRG G+VTMSS++ A+ A+ + ++ GR + V +
Sbjct: 170 FEQAGTVEIAEVIYNRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPR 229
Query: 561 NPGTKRNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDR 740
+R P+ +YE ++VYVGNLPW L FS+ G VV RV++DR
Sbjct: 230 GSRPER-------APR---VYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDR 279
Query: 741 KTGKNRVFAFLSFANLEERDAALS-LNGTEYEGRRIIV 851
+TG++R F F++ ++++E + A+S L+G EGR I V
Sbjct: 280 ETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRV 317
Score = 73 bits (178), Expect = 2e-013
Identities = 42/111 (37%), Positives = 65/111 (58%), Gaps = 2/111 (1%)
Frame = +3
Query: 543 RYSVDMNPGTKRNTSALNSTPKKI-LMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVS 719
RY ++ T + S P++ +YE ++VYVGNLPW L FS+ G VV
Sbjct: 213 RYDLNGRLLTVNKAAPRGSRPERAPRVYEPAFRVYVGNLPWDVDNGRLEQLFSEHGKVVE 272
Query: 720 TRVLHDRKTGKNRVFAFLSFANLEERDAALS-LNGTEYEGRRIIVRQGIER 869
RV++DR+TG++R F F++ ++++E + A+S L+G EGR I V ER
Sbjct: 273 ARVVYDRETGRSRGFGFVTMSDVDELNEAISALDGQNLEGRAIRVNVAEER 323
Score = 62 bits (149), Expect = 6e-010
Identities = 31/80 (38%), Positives = 46/80 (57%)
Frame = +3
Query: 327 LYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASL 506
+YV N+P D +L +F G V+ V + ETG SRG G+VTMS ++ AI++L
Sbjct: 246 VYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAISAL 305
Query: 507 DGNEVGGREMRVRYSVDMNP 566
DG + GR +RV + + P
Sbjct: 306 DGQNLEGRAIRVNVAEERPP 325
>TAIR9_protein||AT1G60000.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr1:22093678-22094540
REVERSE
Length = 259
Score = 110 bits (273), Expect = 2e-024
Identities = 79/222 (35%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Frame = +3
Query: 198 SSSSELSVLDE---AKVEEEEVKADGETGEETEAEPVVTKKPRPCELYVCNIPRSYDITQ 368
S S VL E K+EEEE K DG + V TK LY N+P + D
Sbjct: 48 SCSRRFRVLSETITVKLEEEE-KDDGASAVLDPPAAVNTK------LYFGNLPYNVDSAT 100
Query: 369 LLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRY 548
L + Q F VEV N +TG+SRG +VTMS++ I +LDG E GR ++V +
Sbjct: 101 LAQIIQDFANPELVEVLYNRDTGQSRGFAFVTMSNVEDCNIIIDNLDGTEYLGRALKVNF 160
Query: 549 SVDMNPGTKRNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRV 728
+ P K+ L E+ +K++VGNL W + L F + G VV RV
Sbjct: 161 ADKPKPN------------KEPLYPETEHKLFVGNLSWTVTSESLAGAFRECGDVVGARV 208
Query: 729 LHDRKTGKNRVFAFLSFANLEERDAAL-SLNGTEYEGRRIIV 851
+ D TG++R + F+ +++ E + AL SL+G E EGR I V
Sbjct: 209 VFDGDTGRSRGYGFVCYSSKAEMETALESLDGFELEGRAIRV 250
>TAIR9_protein||AT3G52150.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 101 bits (251), Expect = 9e-022
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)
Frame = +3
Query: 120 VPSLKASTTSFHLSSLSRQRLQLKVFSSSSELSVLDEAKVEEEEVKADGETGEETEAEPV 299
V S+K + SF S + ++ VFSS S+ + ETE +P
Sbjct: 8 VVSIKPTIFSFQSESFTPLHTRVNVFSSKPFPSLAGTFS-RSSRTRFIPYAVTETEEKPA 66
Query: 300 VTKKPRPC--ELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSS 473
+Y+ NIPR+ QL + + G V V+V + +G SR G+ TM S
Sbjct: 67 ALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKS 126
Query: 474 INSAKNAIASLDGNEVGGREMRVRYSVDMNPGTKRNTSALNSTPKKILMYESPYKVYVGN 653
+ A + L+GN V GRE++V + + + + S L S + +SPYKVYVGN
Sbjct: 127 VEDANAVVEKLNGNTVEGREIKVNIT-EKPIASSPDLSVLQSEDSAFV--DSPYKVYVGN 183
Query: 654 LPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEERDAAL-SLNGTEY 830
L + L + FS+ G VVS +V T K+ F F++F++ E+ +AA+ +LN +
Sbjct: 184 LAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLL 243
Query: 831 EGRRIIVRQ 857
EG++I V +
Sbjct: 244 EGQKIRVNK 252
>TAIR9_protein||AT3G52150.2 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:19342074-19343090 FORWARD
Length = 254
Score = 101 bits (251), Expect = 9e-022
Identities = 77/249 (30%), Positives = 122/249 (48%), Gaps = 7/249 (2%)
Frame = +3
Query: 120 VPSLKASTTSFHLSSLSRQRLQLKVFSSSSELSVLDEAKVEEEEVKADGETGEETEAEPV 299
V S+K + SF S + ++ VFSS S+ + ETE +P
Sbjct: 8 VVSIKPTIFSFQSESFTPLHTRVNVFSSKPFPSLAGTFS-RSSRTRFIPYAVTETEEKPA 66
Query: 300 VTKKPRPC--ELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSS 473
+Y+ NIPR+ QL + + G V V+V + +G SR G+ TM S
Sbjct: 67 ALDPSSEAARRVYIGNIPRTVTNEQLTKLVEEHGAVEKVQVMYDKYSGRSRRFGFATMKS 126
Query: 474 INSAKNAIASLDGNEVGGREMRVRYSVDMNPGTKRNTSALNSTPKKILMYESPYKVYVGN 653
+ A + L+GN V GRE++V + + + + S L S + +SPYKVYVGN
Sbjct: 127 VEDANAVVEKLNGNTVEGREIKVNIT-EKPIASSPDLSVLQSEDSAFV--DSPYKVYVGN 183
Query: 654 LPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEERDAAL-SLNGTEY 830
L + L + FS+ G VVS +V T K+ F F++F++ E+ +AA+ +LN +
Sbjct: 184 LAKTVTKEMLENLFSEKGKVVSAKVSRVPGTSKSTGFGFVTFSSEEDVEAAIVALNNSLL 243
Query: 831 EGRRIIVRQ 857
EG++I V +
Sbjct: 244 EGQKIRVNK 252
>TAIR9_protein||AT1G74230.1 | Symbols: GR-RBP5 | GR-RBP5 (glycine-rich
RNA-binding protein 5); ATP binding / RNA binding |
chr1:27915346-27916857 FORWARD
Length = 290
Score = 72 bits (175), Expect = 6e-013
Identities = 34/81 (41%), Positives = 53/81 (65%)
Frame = +3
Query: 627 SPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEERDAA 806
S K++VG + + T GLR+ FS++G VV +++ DR+TG++R FAF++F + EE A
Sbjct: 32 SSSKIFVGGISYSTDEFGLREAFSKYGEVVDAKIIVDRETGRSRGFAFVTFTSTEEASNA 91
Query: 807 LSLNGTEYEGRRIIVRQGIER 869
+ L+G + GRRI V ER
Sbjct: 92 MQLDGQDLHGRRIRVNYATER 112
>TAIR9_protein||AT5G50250.1 | Symbols: | 31 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein RNP-T, putative / RNA-binding protein
1/2/3, putative / RNA-binding protein cp31, putative |
chr5:20452677-20453965 REVERSE
Length = 290
Score = 70 bits (169), Expect = 3e-012
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +3
Query: 618 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEER 797
+Y++ +++YVGNLPW L FS+ G VV RV+ DR+TG++R F F+ +N E
Sbjct: 202 VYDAAFRIYVGNLPWDVDSGRLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEV 261
Query: 798 DAAL-SLNGTEYEGRRIIVRQGIERT 872
+ A+ +L+G EGR I V ERT
Sbjct: 262 NVAIAALDGQNLEGRAIKVNVAEERT 287
Score = 64 bits (154), Expect = 2e-010
Identities = 58/223 (26%), Positives = 100/223 (44%), Gaps = 12/223 (5%)
Frame = +3
Query: 21 AASSSCFAVPLSSSRSSSNAIPKCQTLISPFSYVPSLKASTTSFHLSSLSRQRLQLKVFS 200
++SS+ F +P + SSS + F++ S + + L S + + V
Sbjct: 18 SSSSTLFCIPSIFNISSSES--------HRFNFSLSSRPVNLTLSLKSKTLRNSSPVVTF 69
Query: 201 SSSELSVLDEAKVEEEEVKADGETGEET-EAEPVV--TKKPRPCELYVCNIPRSYDITQL 371
S + +E + E+ + T +E+ E+E V + P +L+V N+P D L
Sbjct: 70 VSQTSNWAEEEEGEDGSIGGTSVTVDESFESEDGVGFPEPPEEAKLFVGNLPYDVDSQAL 129
Query: 372 LDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRVRYS 551
+F+ GTV EV N +T +SRG G+VTMS++ A+ A+ + EV GR + V +
Sbjct: 130 AMLFEQAGTVEISEVIYNRDTDQSRGFGFVTMSTVEEAEKAVEKFNSFEVNGRRLTVNRA 189
Query: 552 VDMNPGTKRNTSALNSTPKKILMYESPYKVYVGNLPWLTQPDG 680
+R ++ +I + P+ V G L L G
Sbjct: 190 APRGSRPERQPRVYDAA-FRIYVGNLPWDVDSGRLERLFSEHG 231
>TAIR9_protein||AT4G39260.1 | Symbols: CCR1, ATGRP8, GR-RBP8, GRP8 | GR-RBP8;
RNA binding / nucleic acid binding / nucleotide binding |
chr4:18274166-18274958 REVERSE
Length = 170
Score = 68 bits (165), Expect = 8e-012
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 618 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEE- 794
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F + +
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAM 60
Query: 795 RDAALSLNGTEYEGRRIIVRQGIER 869
RDA +NG E +GR I V + R
Sbjct: 61 RDAIEEMNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.2 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 127
Score = 68 bits (165), Expect = 8e-012
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 618 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEE- 794
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F + +
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAM 60
Query: 795 RDAALSLNGTEYEGRRIIVRQGIER 869
RDA +NG E +GR I V + R
Sbjct: 61 RDAIEEMNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G39260.3 | Symbols: CCR1, ATGRP8, GRP8 | GR-RBP8; RNA binding
/ nucleic acid binding / nucleotide binding | chr4:18274166-18274958
REVERSE
Length = 93
Score = 68 bits (165), Expect = 8e-012
Identities = 33/85 (38%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Frame = +3
Query: 618 MYESPYKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEE- 794
M E Y+ +VG L W T + L+ FSQFG V+ +++++DR++G++R F F++F + +
Sbjct: 1 MSEVEYRCFVGGLAWATNDEDLQRTFSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAM 60
Query: 795 RDAALSLNGTEYEGRRIIVRQGIER 869
RDA +NG E +GR I V + R
Sbjct: 61 RDAIEEMNGKELDGRVITVNEAQSR 85
>TAIR9_protein||AT4G03110.1 | Symbols: | RNA-binding protein, putative |
chr4:1376612-1379275 REVERSE
Length = 442
Score = 67 bits (163), Expect = 1e-011
Identities = 36/101 (35%), Positives = 59/101 (58%)
Frame = +3
Query: 297 VVTKKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSI 476
V T+ P L++ NIPR + +L FQSFG V+S +V + TG S+ G+V+ S
Sbjct: 341 VQTEGPEGANLFIYNIPREFGDQELAAAFQSFGIVLSAKVFVDKATGVSKCFGFVSYDSQ 400
Query: 477 NSAKNAIASLDGNEVGGREMRVRYSVDMNPGTKRNTSALNS 599
+A+NAI ++G +GG++++V+ D N G + +L S
Sbjct: 401 AAAQNAIDMMNGRHLGGKKLKVQLKRDSNNGQPSSNPSLIS 441
>TAIR9_protein||AT2G37220.1 | Symbols: | 29 kDa ribonucleoprotein, chloroplast,
putative / RNA-binding protein cp29, putative | chr2:15634980-15636331
REVERSE
Length = 290
Score = 65 bits (158), Expect = 5e-011
Identities = 48/139 (34%), Positives = 70/139 (50%), Gaps = 3/139 (2%)
Frame = +3
Query: 126 SLKASTTSFHLSSLSRQRLQLKVFSSSSELSVLDEAKVEEEEVKADGETGEETEAEPVVT 305
SL + + SF L+S S ++S + + A E EV+ DG A P
Sbjct: 29 SLLSPSLSFKLNSDSVSFSIAAKWNSPASRFARNVAITSEFEVEEDGFA---DVAPPKEQ 85
Query: 306 KKPRPCELYVCNIPRSYDITQLLDMFQSFGTVISVEVSRNPETGESRGSGYVTMSSINSA 485
+L+V N+P + D QL +F+S G V VEV + TG SRG G+VTMSS++
Sbjct: 86 SFSADLKLFVGNLPFNVDSAQLAQLFESAGNVEMVEVIYDKITGRSRGFGFVTMSSVSEV 145
Query: 486 KNAIASLDGNEVGGREMRV 542
+ A +G E+ GR +RV
Sbjct: 146 EAAAQQFNGYELDGRPLRV 164
>TAIR9_protein||AT3G53460.1 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 65 bits (157), Expect = 7e-011
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Frame = +3
Query: 54 SSSRSSSNAIPKCQTLISPFSYV-PSLKASTTSFHLSSLSRQRLQLKVFSSSS------- 209
S S + ++P C + + S + PSL S HL S+ LK S +
Sbjct: 7 SLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASS-ALKCSSPAEYPSRFVR 65
Query: 210 ELSVLDEAKVEEEEVKADGETGEETEAEPVVTKKPRP-CELYVCNIPRSYDITQLLDMFQ 386
++V + +VEE+++ ADG+ ++ PV P +L+V N+ + D QL +F+
Sbjct: 66 NVAVSSDFEVEEDDMFADGD-----DSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFE 120
Query: 387 SFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRV 542
S G V VEV + TG SRG G+VTMS+ + A +G E GR +RV
Sbjct: 121 SAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRV 172
>TAIR9_protein||AT3G53460.2 | Symbols: CP29 | CP29; RNA binding / poly(U)
binding | chr3:19819738-19821423 REVERSE
Length = 343
Score = 65 bits (157), Expect = 7e-011
Identities = 55/172 (31%), Positives = 85/172 (49%), Gaps = 15/172 (8%)
Frame = +3
Query: 54 SSSRSSSNAIPKCQTLISPFSYV-PSLKASTTSFHLSSLSRQRLQLKVFSSSS------- 209
S S + ++P C + + S + PSL S HL S+ LK S +
Sbjct: 7 SLSAFNPKSLPLCVSRPASVSVLPPSLSFKLHSDHLVSIFASS-ALKCSSPAEYPSRFVR 65
Query: 210 ELSVLDEAKVEEEEVKADGETGEETEAEPVVTKKPRP-CELYVCNIPRSYDITQLLDMFQ 386
++V + +VEE+++ ADG+ ++ PV P +L+V N+ + D QL +F+
Sbjct: 66 NVAVSSDFEVEEDDMFADGD-----DSAPVERNSFSPDLKLFVGNLSFNVDSAQLAQLFE 120
Query: 387 SFGTVISVEVSRNPETGESRGSGYVTMSSINSAKNAIASLDGNEVGGREMRV 542
S G V VEV + TG SRG G+VTMS+ + A +G E GR +RV
Sbjct: 121 SAGNVEMVEVIYDKVTGRSRGFGFVTMSTAAEVEAAAQQFNGYEFEGRPLRV 172
>TAIR9_protein||AT3G26420.1 | Symbols: ATRZ-1A | ATRZ-1A; RNA binding /
nucleotide binding | chr3:9671953-9673055 FORWARD
Length = 246
Score = 61 bits (146), Expect = 1e-009
Identities = 30/80 (37%), Positives = 50/80 (62%), Gaps = 2/80 (2%)
Frame = +3
Query: 618 MYESP-YKVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEE 794
M E P Y+ ++G L W T GLRD F ++G +V +V+ D+ +G++R F F++F +
Sbjct: 1 MSEDPEYRCFIGGLAWTTSDRGLRDAFEKYGHLVEAKVVLDKFSGRSRGFGFITFDEKKA 60
Query: 795 RDAAL-SLNGTEYEGRRIIV 851
D A+ ++NG + +GR I V
Sbjct: 61 MDEAIAAMNGMDLDGRTITV 80
>TAIR9_protein||AT4G13860.1 | Symbols: | glycine-rich RNA-binding protein,
putative | chr4:8022601-8023162 FORWARD
Length = 88
Score = 61 bits (146), Expect = 1e-009
Identities = 32/74 (43%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Frame = +3
Query: 636 KVYVGNLPWLTQPDGLRDHFSQFGTVVSTRVLHDRKTGKNRVFAFLSFANLEERDAALS- 812
+VYVGNL T D LR+ FS +G VV V+ DR T ++R F F+++++ E +AA+S
Sbjct: 4 RVYVGNLSPTTTDDMLREAFSGYGNVVDAIVMRDRYTDRSRGFGFVTYSSHSEAEAAVSG 63
Query: 813 LNGTEYEGRRIIVR 854
++G E GRR+ V+
Sbjct: 64 MDGKELNGRRVSVK 77
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,320,152
Number of Sequences: 33410
Number of Extensions: 5302320152
Number of Successful Extensions: 195104914
Number of sequences better than 0.0: 0
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