BLASTX 7.6.2
Query= UN09631 /QuerySize=1872
(1871 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76450.1 | Symbols: | oxygen-evolving complex... 401 8e-112
TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (... 205 1e-052
TAIR9_protein||AT1G20880.1 | Symbols: | RNA recognition motif (... 123 5e-028
>TAIR9_protein||AT1G76450.1 | Symbols: | oxygen-evolving complex-related |
chr1:28684618-28686109 FORWARD
Length = 248
Score = 401 bits (1030), Expect = 8e-112
Identities = 207/250 (82%), Positives = 223/250 (89%), Gaps = 9/250 (3%)
Frame = +3
Query: 51 MAAISPWLSSPQSFSSPRVSTRYSSARCTSLPALV----SSNEEQHQILSRDEVGMKRRE 218
MAAISPWLSSPQSFS+PRV T S RC+S+ A + SSNEEQH+I SRD VGMKRR+
Sbjct: 1 MAAISPWLSSPQSFSNPRV-TITDSRRCSSISAAISVLDSSNEEQHRISSRDHVGMKRRD 59
Query: 219 VMLNIASSSAFL---LPPAFAETNSSEAFRVYTDEANKFEISIPQEWQVGQAAEPNGFKS 389
VML IASS FL + PAFAETN+SEAFRVYTDE NKFEISIPQ+WQVGQ AEPNGFKS
Sbjct: 60 VMLQIASSVFFLPLAISPAFAETNASEAFRVYTDETNKFEISIPQDWQVGQ-AEPNGFKS 118
Query: 390 ITAFYPEETSSYNVSVAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQKPAGVTAKLV 569
ITAFYP+ETS+ NVS+AITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQKP GVTAKL+
Sbjct: 119 ITAFYPQETSTSNVSIAITGLGPDFTRMESFGKVEAFAETLVSGLDRSWQKPVGVTAKLI 178
Query: 570 DSRSSKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFNDEESADQSSKIQ 749
DSR+SKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQF DEESA+QSSKIQ
Sbjct: 179 DSRASKGFYYIEYTLQNPGEARKHLYSAIGMATNGWYNRLYTVTGQFTDEESAEQSSKIQ 238
Query: 750 KAVKSFKFI* 779
K VKSF+FI*
Sbjct: 239 KTVKSFRFI* 248
>TAIR9_protein||AT1G76460.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:28686932-28688506 REVERSE
Length = 286
Score = 205 bits (519), Expect = 1e-052
Identities = 106/130 (81%), Positives = 112/130 (86%), Gaps = 7/130 (5%)
Frame = -2
Query: 1870 YGVAAYGPEYMHSQSQGLYGPPYMGQ*YLQVYGVPGGAVNTPVYQYGQLSQTVPGGQSYT 1691
YGV AYGPEYM+SQSQGLY PYMGQ YLQVYGVP GAVN+PVYQYGQLSQT+P G YT
Sbjct: 159 YGVTAYGPEYMYSQSQGLYS-PYMGQQYLQVYGVP-GAVNSPVYQYGQLSQTIPNGHGYT 216
Query: 1690 AVQGYSVPGSHVLQLGGGPTVSAMATSSMPPALQVPYP---PGPAPAQSHIIVHPPQFMQ 1520
AVQGYSVPGSH+LQL GGPTVS M TSSM PALQ PYP PGPAP QSHIIVH PQFMQ
Sbjct: 217 AVQGYSVPGSHILQL-GGPTVSTMTTSSM-PALQAPYPSGIPGPAPVQSHIIVHSPQFMQ 274
Query: 1519 SSSSDQTTSY 1490
S++SDQTTSY
Sbjct: 275 STASDQTTSY 284
>TAIR9_protein||AT1G20880.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr1:7262879-7264834 REVERSE
Length = 275
Score = 123 bits (307), Expect = 5e-028
Identities = 62/92 (67%), Positives = 70/92 (76%), Gaps = 2/92 (2%)
Frame = -2
Query: 1870 YGVAAYGPEYMHSQSQGLYGPPYMGQ*YLQVYGVPGGAVNTPVYQYGQLSQTVPGGQSYT 1691
YGV YGP+YM+SQSQG YG PYMGQ YLQVYGVP GAVN+P YQYGQLS T+PG YT
Sbjct: 159 YGVTPYGPDYMYSQSQGFYG-PYMGQQYLQVYGVP-GAVNSPGYQYGQLSHTIPGAHGYT 216
Query: 1690 AVQGYSVPGSHVLQLGGGPTVSAMATSSMPPA 1595
A QGYS PGSHVLQLG +SA+ + P+
Sbjct: 217 AGQGYSHPGSHVLQLGATSPMSAIQSPYPSPS 248
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,346,187,961
Number of Sequences: 33410
Number of Extensions: 5346187961
Number of Successful Extensions: 195116757
Number of sequences better than 0.0: 0
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