BLASTX 7.6.2
Query= UN09677 /QuerySize=981
(980 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|301133570|gb|ADK63407.1| zinc finger protein [Brassica rapa] 383 3e-104
gi|17981378|gb|AAL50981.1|AF453322_1 zinc finger protein LSD1 [B... 374 1e-101
gi|17981380|gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [B... 345 1e-092
gi|297804100|ref|XP_002869934.1| hypothetical protein ARALYDRAFT... 310 2e-082
gi|30685085|ref|NP_849549.1| zinc finger protein LSD1 [Arabidops... 309 8e-082
gi|30685083|ref|NP_849548.1| zinc finger protein LSD1 [Arabidops... 306 4e-081
gi|227204487|dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana] 294 2e-077
gi|255641264|gb|ACU20909.1| unknown [Glycine max] 255 1e-065
gi|305387471|gb|ADM52200.1| zinc finger protein LSD1 [Pisum sati... 252 1e-064
gi|217075336|gb|ACJ86028.1| unknown [Medicago truncatula] 245 1e-062
gi|255578021|ref|XP_002529881.1| Charged multivesicular body pro... 243 3e-062
gi|296089240|emb|CBI39012.3| unnamed protein product [Vitis vini... 242 9e-062
gi|225444223|ref|XP_002276731.1| PREDICTED: hypothetical protein... 230 3e-058
gi|224115560|ref|XP_002317066.1| predicted protein [Populus tric... 227 3e-057
gi|170780164|gb|ACB37312.1| LSD1-like protein [Hordeum vulgare s... 221 2e-055
gi|224061463|ref|XP_002300492.1| predicted protein [Populus tric... 215 9e-054
gi|32400832|gb|AAP80648.1|AF475127_1 18S subunit ribosomal prote... 177 3e-042
gi|238480867|ref|NP_001154257.1| zinc finger protein LSD1 [Arabi... 171 1e-040
>gi|301133570|gb|ADK63407.1| zinc finger protein [Brassica rapa]
Length = 191
Score = 383 bits (982), Expect = 3e-104
Identities = 183/191 (95%), Positives = 185/191 (96%), Gaps = 4/191 (2%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPL--HPPPPH--HHGMDMAHIVCGGC 652
MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPL HPPPPH H GMDMAHIVCGGC
Sbjct: 1 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPHPPPPHHAHAGMDMAHIVCGGC 60
Query: 651 RTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQ 472
RTMLMYTRGA+SVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA+CQ
Sbjct: 61 RTMLMYTRGASSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAVCQ 120
Query: 471 FVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVS 292
FVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPP QTQTVVVENPMSVNESGKLVS
Sbjct: 121 FVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPSQTQTVVVENPMSVNESGKLVS 180
Query: 291 NVVVGVTTGQK 259
NVVVGVTTGQK
Sbjct: 181 NVVVGVTTGQK 191
>gi|17981378|gb|AAL50981.1|AF453322_1 zinc finger protein LSD1 [Brassica
oleracea]
Length = 193
Score = 374 bits (959), Expect = 1e-101
Identities = 181/194 (93%), Positives = 184/194 (94%), Gaps = 8/194 (4%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLH-----PPPPH--HHGMDMAHIVC 661
MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLH PPPPH H GMDMAHIVC
Sbjct: 1 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPHPPPPPPPHHAHAGMDMAHIVC 60
Query: 660 GGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 481
GGCRTMLMYTRGA+SVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA
Sbjct: 61 GGCRTMLMYTRGASSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 120
Query: 480 ICQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGK 301
+CQFVTNVNMSNGRVPLASNRPNGTA+PGTMPSTST STPP QTQTVVVENPMSVNESGK
Sbjct: 121 VCQFVTNVNMSNGRVPLASNRPNGTAAPGTMPSTST-STPPSQTQTVVVENPMSVNESGK 179
Query: 300 LVSNVVVGVTTGQK 259
LVSNVVVGVTTGQK
Sbjct: 180 LVSNVVVGVTTGQK 193
>gi|17981380|gb|AAL50982.1|AF453323_1 zinc finger protein LSD2 [Brassica
oleracea]
Length = 193
Score = 345 bits (883), Expect = 1e-092
Identities = 162/192 (84%), Positives = 174/192 (90%), Gaps = 5/192 (2%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPP----HHHGMDMAHIVCGGC 652
MQDQL+CHGCRNTL+YPRGATNVRCALC+ +NMVPLHPPPP H GMDMAHIVCGGC
Sbjct: 1 MQDQLMCHGCRNTLLYPRGATNVRCALCNTINMVPLHPPPPPPHHAHAGMDMAHIVCGGC 60
Query: 651 RTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQ 472
RTMLMYTRGA+SVRCSCCQTVNLVP PP+NQ AH+NCGNCRTTLMYPYGA SV+CA+CQ
Sbjct: 61 RTMLMYTRGASSVRCSCCQTVNLVPATPPTNQPAHVNCGNCRTTLMYPYGAPSVRCAVCQ 120
Query: 471 FVTNVNMSNGRVPLASNRPNGTA-SPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLV 295
FVTNVNM NGRVP +N+PNGTA SPG MPSTSTQSTPP QTQTVVVENPMSVNESGKLV
Sbjct: 121 FVTNVNMGNGRVPFPTNQPNGTASSPGPMPSTSTQSTPPSQTQTVVVENPMSVNESGKLV 180
Query: 294 SNVVVGVTTGQK 259
SNVVVGVTT +K
Sbjct: 181 SNVVVGVTTDKK 192
>gi|297804100|ref|XP_002869934.1| hypothetical protein ARALYDRAFT_492829
[Arabidopsis lyrata subsp. lyrata]
Length = 184
Score = 310 bits (794), Expect = 2e-082
Identities = 153/190 (80%), Positives = 164/190 (86%), Gaps = 15/190 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PSNQVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSNQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNG+A PGTMPS STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGSACPGTMPS----STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTT 268
V+NVVVGVTT
Sbjct: 172 VTNVVVGVTT 181
>gi|30685085|ref|NP_849549.1| zinc finger protein LSD1 [Arabidopsis thaliana]
Length = 189
Score = 309 bits (789), Expect = 8e-082
Identities = 155/191 (81%), Positives = 165/191 (86%), Gaps = 15/191 (7%)
Frame = -3
Query: 822 DMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTM 643
DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTM
Sbjct: 5 DMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTM 59
Query: 642 LMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 481
LMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA
Sbjct: 60 LMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCA 119
Query: 480 ICQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGK 301
+CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGK
Sbjct: 120 VCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGK 175
Query: 300 LVSNVVVGVTT 268
LVSNVVVGVTT
Sbjct: 176 LVSNVVVGVTT 186
Score = 101 bits (249), Expect = 3e-019
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 10 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 69
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 70 RCSCCQ-TTNL------VPAHSNQ 86
>gi|30685083|ref|NP_849548.1| zinc finger protein LSD1 [Arabidopsis thaliana]
Length = 184
Score = 306 bits (783), Expect = 4e-081
Identities = 154/190 (81%), Positives = 164/190 (86%), Gaps = 15/190 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTT 268
VSNVVVGVTT
Sbjct: 172 VSNVVVGVTT 181
Score = 101 bits (249), Expect = 3e-019
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 65 RCSCCQ-TTNL------VPAHSNQ 81
>gi|227204487|dbj|BAH57095.1| AT4G20380 [Arabidopsis thaliana]
Length = 218
Score = 294 bits (751), Expect = 2e-077
Identities = 147/183 (80%), Positives = 157/183 (85%), Gaps = 15/183 (8%)
Frame = -3
Query: 822 DMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTM 643
DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTM
Sbjct: 5 DMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTM 59
Query: 642 LMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 481
LMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA
Sbjct: 60 LMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCA 119
Query: 480 ICQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGK 301
+CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGK
Sbjct: 120 VCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGK 175
Query: 300 LVS 292
LVS
Sbjct: 176 LVS 178
>gi|255641264|gb|ACU20909.1| unknown [Glycine max]
Length = 177
Score = 255 bits (650), Expect = 1e-065
Identities = 124/178 (69%), Positives = 147/178 (82%), Gaps = 10/178 (5%)
Frame = -3
Query: 792 CRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGATSV 613
CR+ L+YPRGATNV CALC+ + VP PP GM+M+ + CGGCRT+LMYTRGATSV
Sbjct: 10 CRSLLLYPRGATNVCCALCNTITSVP--PP-----GMEMSQLYCGGCRTLLMYTRGATSV 62
Query: 612 RCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVP 433
RCSCC TVNLV PP SNQVAH++CGNCRTTLMYPYGA SVKCA+C F+TNV+ +NGR+P
Sbjct: 63 RCSCCHTVNLV--PPASNQVAHVHCGNCRTTLMYPYGAPSVKCALCHFITNVSTNNGRLP 120
Query: 432 LASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTTGQK 259
+ +RPNGT + GT+P+TST S P Q+QTVVVENPMSV+ SGKLVSNVVVGVTT +K
Sbjct: 121 IPVHRPNGTTNAGTLPTTST-SMPQSQSQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 177
>gi|305387471|gb|ADM52200.1| zinc finger protein LSD1 [Pisum sativum]
Length = 176
Score = 252 bits (641), Expect = 1e-064
Identities = 125/177 (70%), Positives = 143/177 (80%), Gaps = 11/177 (6%)
Frame = -3
Query: 789 RNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGATSVR 610
RN L+YPRGATNV CALC+ ++ VP PP GMDM+ + CGGCRT+LMYTRGATSVR
Sbjct: 11 RNMLLYPRGATNVCCALCNTISPVP--PP-----GMDMSQLYCGGCRTLLMYTRGATSVR 63
Query: 609 CSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVPL 430
CSCC TVNL P SNQVAH+ C NCRTTLMYPYGA SVKCA+C ++TN+NMSNGRVP+
Sbjct: 64 CSCCHTVNLA---PVSNQVAHVPCANCRTTLMYPYGAPSVKCAVCHYITNINMSNGRVPV 120
Query: 429 ASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTTGQK 259
+NRP GT + GT+PSTST S P Q QTVVVENPMSV+ SGKLVSNVVVGVTT +K
Sbjct: 121 PANRPQGTTNLGTLPSTST-SMPQSQGQTVVVENPMSVDSSGKLVSNVVVGVTTDKK 176
>gi|217075336|gb|ACJ86028.1| unknown [Medicago truncatula]
Length = 176
Score = 245 bits (624), Expect = 1e-062
Identities = 121/177 (68%), Positives = 141/177 (79%), Gaps = 11/177 (6%)
Frame = -3
Query: 789 RNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGATSVR 610
RNTL+YPRGATNV CALC+ + VP PP GMDM+ + CGGCRT+LMYTRGATSVR
Sbjct: 11 RNTLLYPRGATNVCCALCNTITAVP--PP-----GMDMSQLYCGGCRTLLMYTRGATSVR 63
Query: 609 CSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVPL 430
CSCC TVNL P SNQVAH+ CGN RTTLMYPYGA SVKC +C ++TN+NMSNGR+P+
Sbjct: 64 CSCCHTVNLA---PVSNQVAHVPCGNYRTTLMYPYGAPSVKCVVCHYITNINMSNGRLPI 120
Query: 429 ASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTTGQK 259
+RP+GT G +PSTST S P Q+QTVVVENPMSV+ SGKLVS+VVVGVTT +K
Sbjct: 121 PGHRPHGTTDSGMLPSTST-SMPQSQSQTVVVENPMSVDSSGKLVSDVVVGVTTDKK 176
>gi|255578021|ref|XP_002529881.1| Charged multivesicular body protein 2b-B,
putative [Ricinus communis]
Length = 405
Score = 243 bits (620), Expect = 3e-062
Identities = 124/183 (67%), Positives = 142/183 (77%), Gaps = 13/183 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQ Q++C+GCR+ L+YPRGA NV CALC + P PP GM+MA ++CGGCRT+L
Sbjct: 233 MQGQIMCNGCRSILLYPRGAPNVCCALCSTITAAP--PP-----GMEMAQLICGGCRTLL 285
Query: 639 MYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTN 460
M+TRGATSVRCSCC TVNL P S Q AHINC NCRTTL+YPYGA SVKCA+C +VTN
Sbjct: 286 MHTRGATSVRCSCCHTVNLA---PVSGQAAHINCRNCRTTLVYPYGAPSVKCALCHYVTN 342
Query: 459 VNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVV 280
V+M N RV L +NRPNGT G PSTST ST QTQTVVVENPMSV+ESGKLVSNVVV
Sbjct: 343 VSMGNVRVALPTNRPNGTT--GMTPSTST-STSQSQTQTVVVENPMSVDESGKLVSNVVV 399
Query: 279 GVT 271
G+T
Sbjct: 400 GIT 402
>gi|296089240|emb|CBI39012.3| unnamed protein product [Vitis vinifera]
Length = 259
Score = 242 bits (616), Expect = 9e-062
Identities = 120/181 (66%), Positives = 141/181 (77%), Gaps = 16/181 (8%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQ L+C+GCR+ L+YPRGATNV CALC+ V VP PP G++MA ++CGGCRT+L
Sbjct: 89 MQSHLMCNGCRSILVYPRGATNVCCALCNSVTSVP--PP-----GLEMAQLICGGCRTLL 141
Query: 639 MYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTN 460
MYTRGATSVRCSCC TVNL P PSNQVAH+NCGNCRTTLMYPYGA SVKCA+C +VT+
Sbjct: 142 MYTRGATSVRCSCCHTVNLAPA--PSNQVAHVNCGNCRTTLMYPYGAPSVKCAVCHYVTS 199
Query: 459 VNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVV 280
V M N RVP+ +RPN A + PSTS+ +QTVVV+NPMSV+ESGKLVSNVVV
Sbjct: 200 VGMVNVRVPIPVHRPNAAAISASTPSTSS-------SQTVVVKNPMSVDESGKLVSNVVV 252
Query: 279 G 277
G
Sbjct: 253 G 253
>gi|225444223|ref|XP_002276731.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 171
Score = 230 bits (585), Expect = 3e-058
Identities = 115/172 (66%), Positives = 134/172 (77%), Gaps = 16/172 (9%)
Frame = -3
Query: 792 CRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGATSV 613
CR+ L+YPRGATNV CALC+ V VP PP G++MA ++CGGCRT+LMYTRGATSV
Sbjct: 10 CRSILVYPRGATNVCCALCNSVTSVP--PP-----GLEMAQLICGGCRTLLMYTRGATSV 62
Query: 612 RCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVP 433
RCSCC TVNL P PSNQVAH+NCGNCRTTLMYPYGA SVKCA+C +VT+V M N RVP
Sbjct: 63 RCSCCHTVNLAPA--PSNQVAHVNCGNCRTTLMYPYGAPSVKCAVCHYVTSVGMVNVRVP 120
Query: 432 LASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVG 277
+ +RPN A + PSTS+ +QTVVV+NPMSV+ESGKLVSNVVVG
Sbjct: 121 IPVHRPNAAAISASTPSTSS-------SQTVVVKNPMSVDESGKLVSNVVVG 165
>gi|224115560|ref|XP_002317066.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 227 bits (577), Expect = 3e-057
Identities = 116/181 (64%), Positives = 135/181 (74%), Gaps = 14/181 (7%)
Frame = -3
Query: 792 CRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGATSV 613
CR+ L+YP GATNV CALC V +P GMD+A ++C GCRT+LMY RGAT+V
Sbjct: 10 CRSLLLYPSGATNVCCALCSTVTSIPA-------PGMDLAQLICRGCRTLLMYARGATTV 62
Query: 612 RCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVP 433
RCSCC VN P P NQVAH+NCGNC+TTLMYP GA SVKCA+C +VTN++ +N RVP
Sbjct: 63 RCSCCHIVNFAPVGP--NQVAHVNCGNCQTTLMYPNGAPSVKCAVCHYVTNISTANVRVP 120
Query: 432 LASNRPNGTASPGTMPSTSTQST---PPFQTQTVVVENPMSVNESGKLVSNVVVGVTTGQ 262
L +NRP+G GTMPSTST S F TQTVVVENPMSV+ESGKLVSNVVVGVTT +
Sbjct: 121 LPANRPSGIG--GTMPSTSTVSNWTYFSFLTQTVVVENPMSVDESGKLVSNVVVGVTTEK 178
Query: 261 K 259
K
Sbjct: 179 K 179
>gi|170780164|gb|ACB37312.1| LSD1-like protein [Hordeum vulgare subsp. vulgare]
Length = 179
Score = 221 bits (561), Expect = 2e-055
Identities = 110/181 (60%), Positives = 133/181 (73%), Gaps = 11/181 (6%)
Frame = -3
Query: 798 HGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGAT 619
HGCR+ L+YPRGA +V CA+CH V P PP GM+MA ++C GCRT+LMYTR AT
Sbjct: 8 HGCRSVLLYPRGAPSVCCAVCHAVTSAP--PP-----GMEMAQLICVGCRTLLMYTRNAT 60
Query: 618 SVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGR 439
+VRCSCC TVNL PP N +AH+NCG C+T LMYPYGASSVKCAIC F+TN+ M+ R
Sbjct: 61 TVRCSCCDTVNLARPAPPVNSIAHVNCGQCQTVLMYPYGASSVKCAICNFITNIGMNTMR 120
Query: 438 -VPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTTGQ 262
+P + PNG + ++PSTS ST Q TVVVENPM+V++ GKLVSNVVVGVTTG
Sbjct: 121 PLPATMHAPNGISY--SVPSTSAPSTQS-QNVTVVVENPMTVDDKGKLVSNVVVGVTTGG 177
Query: 261 K 259
K
Sbjct: 178 K 178
>gi|224061463|ref|XP_002300492.1| predicted protein [Populus trichocarpa]
Length = 174
Score = 215 bits (547), Expect = 9e-054
Identities = 108/173 (62%), Positives = 127/173 (73%), Gaps = 13/173 (7%)
Frame = -3
Query: 786 NTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTMLMYTRGATSVRC 607
+ L+YP GA+NV CALC V +P GMDMA ++C GCR++LMY GAT+VRC
Sbjct: 12 SVLLYPSGASNVCCALCSTVTSIP-------SPGMDMAQLICRGCRSLLMYPHGATTVRC 64
Query: 606 SCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVPLA 427
SCC VN+ PG NQ AH+NCGNCRT LMYP G+ SVKC +C +VTNV+M+N R+PL
Sbjct: 65 SCCHVVNIAPG---YNQAAHVNCGNCRTALMYPNGSPSVKCPVCHYVTNVSMANMRIPLP 121
Query: 426 SNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTT 268
+NRPNG GT PSTS P QTQTVVVENPMSV+ESGKLVSNVVVGVTT
Sbjct: 122 ANRPNGIG--GTAPSTS-MPLPHSQTQTVVVENPMSVDESGKLVSNVVVGVTT 171
>gi|32400832|gb|AAP80648.1|AF475127_1 18S subunit ribosomal protein [Triticum
aestivum]
Length = 154
Score = 177 bits (447), Expect = 3e-042
Identities = 87/141 (61%), Positives = 106/141 (75%), Gaps = 4/141 (2%)
Frame = -3
Query: 678 MAHIVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGA 499
MA ++C GCRT+LMYTR AT+VRCSCC TVNL PP N +AH+NCG C+T LMYPYGA
Sbjct: 16 MAQLICVGCRTLLMYTRNATTVRCSCCDTVNLARPAPPVNSIAHVNCGQCQTVLMYPYGA 75
Query: 498 SSVKCAICQFVTNVNMSNGR-VPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPM 322
SSVKCAIC F+TN+ M+ R +P + PNG + ++PSTS S Q TVVVENPM
Sbjct: 76 SSVKCAICNFITNIGMNTVRPLPPTMHAPNGISY--SVPSTSAPSAQS-QNVTVVVENPM 132
Query: 321 SVNESGKLVSNVVVGVTTGQK 259
+V++ GKLVSNVVVGVT+G K
Sbjct: 133 TVDDKGKLVSNVVVGVTSGGK 153
>gi|238480867|ref|NP_001154257.1| zinc finger protein LSD1 [Arabidopsis
thaliana]
Length = 210
Score = 171 bits (433), Expect = 1e-040
Identities = 87/100 (87%), Positives = 92/100 (92%), Gaps = 4/100 (4%)
Frame = -3
Query: 567 PSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVPLASNRPNGTASPGTM 388
PS+QVA INCG+CRTTLMYPYGASSVKCA+CQFVTNVNMSNGRVPL +NRPNGTA P
Sbjct: 112 PSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP--- 168
Query: 387 PSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTT 268
PSTST STPP QTQTVVVENPMSV+ESGKLVSNVVVGVTT
Sbjct: 169 PSTST-STPPSQTQTVVVENPMSVDESGKLVSNVVVGVTT 207
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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