BLASTX 7.6.2
Query= UN09677 /QuerySize=981
(980 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein... 311 6e-085
TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein... 309 3e-084
TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein... 309 3e-084
TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein... 306 2e-083
TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein... 306 2e-083
TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein... 306 2e-083
TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein... 306 2e-083
TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LS... 171 6e-043
>TAIR9_protein||AT4G20380.2 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 311 bits (795), Expect = 6e-085
Identities = 156/195 (80%), Positives = 167/195 (85%), Gaps = 15/195 (7%)
Frame = -3
Query: 822 DMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTM 643
DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTM
Sbjct: 5 DMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTM 59
Query: 642 LMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 481
LMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA
Sbjct: 60 LMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCA 119
Query: 480 ICQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGK 301
+CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGK
Sbjct: 120 VCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGK 175
Query: 300 LVSNVVVGVTTGQK* 256
LVSNVVVGVTT +K*
Sbjct: 176 LVSNVVVGVTTDKK* 190
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 10 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 69
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 70 RCSCCQ-TTNL------VPAHSNQ 86
>TAIR9_protein||AT4G20380.1 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 309 bits (789), Expect = 3e-084
Identities = 155/194 (79%), Positives = 166/194 (85%), Gaps = 15/194 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTTGQK* 256
VSNVVVGVTT +K*
Sbjct: 172 VSNVVVGVTTDKK* 185
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 65 RCSCCQ-TTNL------VPAHSNQ 81
>TAIR9_protein||AT4G20380.7 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005012-11006438 FORWARD
Length = 190
Score = 309 bits (789), Expect = 3e-084
Identities = 155/191 (81%), Positives = 165/191 (86%), Gaps = 15/191 (7%)
Frame = -3
Query: 822 DMQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTM 643
DMQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTM
Sbjct: 5 DMQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTM 59
Query: 642 LMYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCA 481
LMYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA
Sbjct: 60 LMYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCA 119
Query: 480 ICQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGK 301
+CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGK
Sbjct: 120 VCQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGK 175
Query: 300 LVSNVVVGVTT 268
LVSNVVVGVTT
Sbjct: 176 LVSNVVVGVTT 186
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 10 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 69
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 70 RCSCCQ-TTNL------VPAHSNQ 86
>TAIR9_protein||AT4G20380.3 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 306 bits (783), Expect = 2e-083
Identities = 154/190 (81%), Positives = 164/190 (86%), Gaps = 15/190 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTT 268
VSNVVVGVTT
Sbjct: 172 VSNVVVGVTT 181
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 65 RCSCCQ-TTNL------VPAHSNQ 81
>TAIR9_protein||AT4G20380.4 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 306 bits (783), Expect = 2e-083
Identities = 154/190 (81%), Positives = 164/190 (86%), Gaps = 15/190 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTT 268
VSNVVVGVTT
Sbjct: 172 VSNVVVGVTT 181
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 65 RCSCCQ-TTNL------VPAHSNQ 81
>TAIR9_protein||AT4G20380.5 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 306 bits (783), Expect = 2e-083
Identities = 154/190 (81%), Positives = 164/190 (86%), Gaps = 15/190 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTT 268
VSNVVVGVTT
Sbjct: 172 VSNVVVGVTT 181
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 65 RCSCCQ-TTNL------VPAHSNQ 81
>TAIR9_protein||AT4G20380.6 | Symbols: LSD1 | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 185
Score = 306 bits (783), Expect = 2e-083
Identities = 154/190 (81%), Positives = 164/190 (86%), Gaps = 15/190 (7%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP------GPPPSNQVAHINCGNCRTTLMYPYGASSVKCAI 478
MYTRGA+SVRCSCCQT NLVP PS+QVA INCG+CRTTLMYPYGASSVKCA+
Sbjct: 56 MYTRGASSVRCSCCQTTNLVPAHSNQVAHAPSSQVAQINCGHCRTTLMYPYGASSVKCAV 115
Query: 477 CQFVTNVNMSNGRVPLASNRPNGTASPGTMPSTSTQSTPPFQTQTVVVENPMSVNESGKL 298
CQFVTNVNMSNGRVPL +NRPNGTA P PSTST STPP QTQTVVVENPMSV+ESGKL
Sbjct: 116 CQFVTNVNMSNGRVPLPTNRPNGTACP---PSTST-STPPSQTQTVVVENPMSVDESGKL 171
Query: 297 VSNVVVGVTT 268
VSNVVVGVTT
Sbjct: 172 VSNVVVGVTT 181
Score = 101 bits (249), Expect = 1e-021
Identities = 47/84 (55%), Positives = 60/84 (71%), Gaps = 7/84 (8%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQFVTNVNMSNGRVPLASNR 418
+C+ CQ TN+ VP SN+
Sbjct: 65 RCSCCQ-TTNL------VPAHSNQ 81
>TAIR9_protein||AT4G20380.8 | Symbols: | zinc finger protein (LSD1) |
chr4:11005027-11006438 FORWARD
Length = 211
Score = 171 bits (433), Expect = 6e-043
Identities = 87/100 (87%), Positives = 92/100 (92%), Gaps = 4/100 (4%)
Frame = -3
Query: 567 PSNQVAHINCGNCRTTLMYPYGASSVKCAICQFVTNVNMSNGRVPLASNRPNGTASPGTM 388
PS+QVA INCG+CRTTLMYPYGASSVKCA+CQFVTNVNMSNGRVPL +NRPNGTA P
Sbjct: 112 PSSQVAQINCGHCRTTLMYPYGASSVKCAVCQFVTNVNMSNGRVPLPTNRPNGTACP--- 168
Query: 387 PSTSTQSTPPFQTQTVVVENPMSVNESGKLVSNVVVGVTT 268
PSTST STPP QTQTVVVENPMSV+ESGKLVSNVVVGVTT
Sbjct: 169 PSTST-STPPSQTQTVVVENPMSVDESGKLVSNVVVGVTT 207
Score = 147 bits (370), Expect = 1e-035
Identities = 67/81 (82%), Positives = 72/81 (88%), Gaps = 5/81 (6%)
Frame = -3
Query: 819 MQDQLVCHGCRNTLMYPRGATNVRCALCHIVNMVPLHPPPPHHHGMDMAHIVCGGCRTML 640
MQDQLVCHGCRN LMYPRGA+NVRCALC+ +NMVP PPPPH DMAHI+CGGCRTML
Sbjct: 1 MQDQLVCHGCRNLLMYPRGASNVRCALCNTINMVP-PPPPPH----DMAHIICGGCRTML 55
Query: 639 MYTRGATSVRCSCCQTVNLVP 577
MYTRGA+SVRCSCCQT NLVP
Sbjct: 56 MYTRGASSVRCSCCQTTNLVP 76
Score = 100 bits (247), Expect = 2e-021
Identities = 41/66 (62%), Positives = 52/66 (78%)
Frame = -3
Query: 669 IVCGGCRTMLMYTRGATSVRCSCCQTVNLVPGPPPSNQVAHINCGNCRTTLMYPYGASSV 490
+VC GCR +LMY RGA++VRC+ C T+N+VP PPP + +AHI CG CRT LMY GASSV
Sbjct: 5 LVCHGCRNLLMYPRGASNVRCALCNTINMVPPPPPPHDMAHIICGGCRTMLMYTRGASSV 64
Query: 489 KCAICQ 472
+C+ CQ
Sbjct: 65 RCSCCQ 70
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,346,187,961
Number of Sequences: 33410
Number of Extensions: 5346187961
Number of Successful Extensions: 195116757
Number of sequences better than 0.0: 0
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