BLASTX 7.6.2
Query= UN09745 /QuerySize=675
(674 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S... 258 4e-069
TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S... 258 4e-069
TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S... 255 2e-068
TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S... 255 2e-068
TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S... 255 2e-068
>TAIR9_protein||AT1G15930.2 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 258 bits (657), Expect = 4e-069
Identities = 127/145 (87%), Positives = 133/145 (91%)
Frame = +2
Query: 77 MSGEEAAPAVVVPPAAEPAAIPEDMDLLTALELTLRKARAHGGVTRGLHESAKLIEKRVA 256
MSG+EAAP VV PP AEPAAIPEDMDL+TALELTLRKARA+GGV RGLHE AKLIEKRVA
Sbjct: 1 MSGDEAAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVA 60
Query: 257 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 436
QL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 437 CLVVKDYGEETTALNIVKKHIESN* 511
CLVVKD+GEETTAL+IV KHI S *
Sbjct: 121 CLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT1G15930.1 | Symbols: | 40S ribosomal protein S12 (RPS12A) |
chr1:5471702-5472741 FORWARD
Length = 145
Score = 258 bits (657), Expect = 4e-069
Identities = 127/145 (87%), Positives = 133/145 (91%)
Frame = +2
Query: 77 MSGEEAAPAVVVPPAAEPAAIPEDMDLLTALELTLRKARAHGGVTRGLHESAKLIEKRVA 256
MSG+EAAP VV PP AEPAAIPEDMDL+TALELTLRKARA+GGV RGLHE AKLIEKRVA
Sbjct: 1 MSGDEAAPVVVPPPVAEPAAIPEDMDLMTALELTLRKARAYGGVVRGLHECAKLIEKRVA 60
Query: 257 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 436
QL VLAEDCNQPDYVKLVKALCADH + LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLVVLAEDCNQPDYVKLVKALCADHEVRLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 437 CLVVKDYGEETTALNIVKKHIESN* 511
CLVVKD+GEETTAL+IV KHI S *
Sbjct: 121 CLVVKDFGEETTALSIVNKHIASQ* 145
>TAIR9_protein||AT2G32060.1 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 255 bits (650), Expect = 2e-068
Identities = 124/145 (85%), Positives = 134/145 (92%)
Frame = +2
Query: 77 MSGEEAAPAVVVPPAAEPAAIPEDMDLLTALELTLRKARAHGGVTRGLHESAKLIEKRVA 256
MSG+EA A VVPP AE A IPEDMD+ TALELT+RK+RA+GGV RGLHESAKLIEKR A
Sbjct: 1 MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 257 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 436
QLCVLAEDCNQPDYVKLVKALCADH+I LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 437 CLVVKDYGEETTALNIVKKHIESN* 511
CLV+KD+GEETTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.3 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 255 bits (650), Expect = 2e-068
Identities = 124/145 (85%), Positives = 134/145 (92%)
Frame = +2
Query: 77 MSGEEAAPAVVVPPAAEPAAIPEDMDLLTALELTLRKARAHGGVTRGLHESAKLIEKRVA 256
MSG+EA A VVPP AE A IPEDMD+ TALELT+RK+RA+GGV RGLHESAKLIEKR A
Sbjct: 1 MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 257 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 436
QLCVLAEDCNQPDYVKLVKALCADH+I LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 437 CLVVKDYGEETTALNIVKKHIESN* 511
CLV+KD+GEETTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
>TAIR9_protein||AT2G32060.2 | Symbols: | 40S ribosomal protein S12 (RPS12C) |
chr2:13639228-13640104 REVERSE
Length = 145
Score = 255 bits (650), Expect = 2e-068
Identities = 124/145 (85%), Positives = 134/145 (92%)
Frame = +2
Query: 77 MSGEEAAPAVVVPPAAEPAAIPEDMDLLTALELTLRKARAHGGVTRGLHESAKLIEKRVA 256
MSG+EA A VVPP AE A IPEDMD+ TALELT+RK+RA+GGV RGLHESAKLIEKR A
Sbjct: 1 MSGDEAVAAPVVPPVAEAAVIPEDMDVSTALELTVRKSRAYGGVVRGLHESAKLIEKRNA 60
Query: 257 QLCVLAEDCNQPDYVKLVKALCADHNINLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 436
QLCVLAEDCNQPDYVKLVKALCADH+I LLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS
Sbjct: 61 QLCVLAEDCNQPDYVKLVKALCADHSIKLLTVPSAKTLGEWAGLCKIDSEGNARKVVGCS 120
Query: 437 CLVVKDYGEETTALNIVKKHIESN* 511
CLV+KD+GEETTALNIVKKH++SN*
Sbjct: 121 CLVIKDFGEETTALNIVKKHLDSN* 145
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,437,431,545
Number of Sequences: 33410
Number of Extensions: 5437431545
Number of Successful Extensions: 200301509
Number of sequences better than 0.0: 0
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