BLASTX 7.6.2
Query= UN09800 /QuerySize=775
(774 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297801784|ref|XP_002868776.1| ribulose bisphosphate carboxyla... 372 3e-101
gi|297801782|ref|XP_002868775.1| ribulose bisphosphate carboxyla... 371 6e-101
gi|132091|sp|P27985.1|RBS2_BRANA RecName: Full=Ribulose bisphosp... 367 2e-099
gi|15240912|ref|NP_198659.1| ribulose bisphosphate carboxylase s... 366 3e-099
gi|132154|sp|P08135.1|RBS_RAPSA RecName: Full=Ribulose bisphosph... 365 4e-099
gi|79013990|gb|ABB51649.1| chloroplast ribulose-1,5-bisphosphate... 364 8e-099
gi|15240901|ref|NP_198657.1| ribulose bisphosphate carboxylase s... 364 1e-098
gi|266891|sp|P05346.2|RBS1_BRANA RecName: Full=Ribulose bisphosp... 364 1e-098
gi|16194|emb|CAA32701.1| ribulose bisphosphate carboxylase [Arab... 364 1e-098
gi|16195|emb|CAA32702.1| ribulose bisphosphate carboxylase [Arab... 362 3e-098
gi|15240903|ref|NP_198658.1| ribulose bisphosphate carboxylase s... 362 4e-098
gi|296784927|dbj|BAJ08160.1| ribulose 1,5-bisphosphate carboxyla... 362 5e-098
gi|119720784|gb|ABL97962.1| ribulose-1,5-bisphosphate carboxylas... 359 2e-097
gi|406727|emb|CAA53083.1| ribulose-1,5-bisphosphate carboxylase ... 355 5e-096
gi|17855|emb|CAA30290.1| rubisco ssu precursor [Brassica napus] 355 5e-096
gi|327554106|gb|AEB00556.1| ribulose-1,5-bisphosphate carboxylas... 351 1e-094
gi|297841389|ref|XP_002888576.1| ribulose bisphosphate carboxyla... 350 1e-094
gi|15219826|ref|NP_176880.1| ribulose bisphosphate carboxylase s... 350 2e-094
gi|11762156|gb|AAG40356.1|AF325004_1 At1g67090 [Arabidopsis thal... 347 2e-093
gi|119720808|gb|ABL97974.1| ribulose bisphosphate carboxylase [B... 332 6e-089
>gi|297801784|ref|XP_002868776.1| ribulose bisphosphate carboxylase [Arabidopsis
lyrata subsp. lyrata]
Length = 181
Score = 372 bits (955), Expect = 3e-101
Identities = 178/181 (98%), Positives = 181/181 (100%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPF+GLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFSGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|297801782|ref|XP_002868775.1| ribulose bisphosphate carboxylase small chain
1B [Arabidopsis lyrata subsp. lyrata]
Length = 181
Score = 371 bits (952), Expect = 6e-101
Identities = 177/181 (97%), Positives = 180/181 (99%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSA FPVTRKANNDITSI+SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSATFPVTRKANNDITSISSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|132091|sp|P27985.1|RBS2_BRANA RecName: Full=Ribulose bisphosphate
carboxylase small chain F1, chloroplastic; Short=RuBisCO small subunit
F1; Flags: Precursor
Length = 181
Score = 367 bits (940), Expect = 2e-099
Identities = 175/181 (96%), Positives = 178/181 (98%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|15240912|ref|NP_198659.1| ribulose bisphosphate carboxylase small chain 1B
[Arabidopsis thaliana]
Length = 181
Score = 366 bits (937), Expect = 3e-099
Identities = 174/181 (96%), Positives = 178/181 (98%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSA+FPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFTD
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTD 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|132154|sp|P08135.1|RBS_RAPSA RecName: Full=Ribulose bisphosphate carboxylase
small chain, chloroplastic; Short=RuBisCO small subunit; Flags:
Precursor
Length = 181
Score = 365 bits (936), Expect = 4e-099
Identities = 176/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTS QATMVAPFTGLKSSAAFPVTRK N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSQLQATMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNA IRIIGFDNNRQVQCISFIAYKPPSFTD
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNALIRIIGFDNNRQVQCISFIAYKPPSFTD 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|79013990|gb|ABB51649.1| chloroplast ribulose-1,5-bisphosphate
carboxylase/oxygenase small subunit precursor [Brassica napus]
Length = 181
Score = 364 bits (934), Expect = 8e-099
Identities = 174/181 (96%), Positives = 177/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MA SMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP
Sbjct: 1 MAYSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|15240901|ref|NP_198657.1| ribulose bisphosphate carboxylase small chain 3B
[Arabidopsis thaliana]
Length = 181
Score = 364 bits (933), Expect = 1e-098
Identities = 174/181 (96%), Positives = 177/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRK N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|266891|sp|P05346.2|RBS1_BRANA RecName: Full=Ribulose bisphosphate
carboxylase small chain, chloroplastic; Short=RuBisCO small subunit;
Flags: Precursor
Length = 181
Score = 364 bits (933), Expect = 1e-098
Identities = 173/181 (95%), Positives = 177/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSS+AFPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|16194|emb|CAA32701.1| ribulose bisphosphate carboxylase [Arabidopsis
thaliana]
Length = 181
Score = 364 bits (932), Expect = 1e-098
Identities = 173/181 (95%), Positives = 177/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSS AVVTSPAQATMVAPFTGLKSSA+FPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|16195|emb|CAA32702.1| ribulose bisphosphate carboxylase [Arabidopsis
thaliana]
Length = 181
Score = 362 bits (929), Expect = 3e-098
Identities = 173/181 (95%), Positives = 176/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRK N DITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSITSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|15240903|ref|NP_198658.1| ribulose bisphosphate carboxylase small chain 2B
[Arabidopsis thaliana]
Length = 181
Score = 362 bits (928), Expect = 4e-098
Identities = 172/181 (95%), Positives = 176/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSM SS AVVTSPAQATMVAPFTGLKSSA+FPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMFSSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|296784927|dbj|BAJ08160.1| ribulose 1,5-bisphosphate carboxylase/oxygenase
[Brassica rapa subsp. chinensis]
Length = 181
Score = 362 bits (927), Expect = 5e-098
Identities = 172/181 (95%), Positives = 176/181 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MA SMLSSAAVVTSPAQATMVAPFTGLKSS+AFPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MAYSMLSSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|119720784|gb|ABL97962.1| ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit precursor [Brassica rapa]
Length = 181
Score = 359 bits (921), Expect = 2e-097
Identities = 171/181 (94%), Positives = 175/181 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MA SMLSSAAVVTSPAQATMVAPFTGLKSS+AFPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MAYSMLSSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVE ELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVELELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|406727|emb|CAA53083.1| ribulose-1,5-bisphosphate carboxylase /oxygenase,
small subunit [Brassica napus]
Length = 181
Score = 355 bits (910), Expect = 5e-096
Identities = 169/181 (93%), Positives = 174/181 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSA VV+SPAQA MVAPFTGLKSSAAFPVTRK N DITSIASNGGRV+CMKVWP
Sbjct: 1 MASSMLSSATVVSSPAQAAMVAPFTGLKSSAAFPVTRKTNTDITSIASNGGRVNCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL+DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGY DGR
Sbjct: 61 PVGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYNDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|17855|emb|CAA30290.1| rubisco ssu precursor [Brassica napus]
Length = 181
Score = 355 bits (910), Expect = 5e-096
Identities = 169/181 (93%), Positives = 175/181 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MA SMLSSAAVVTSPAQATMVAPFTGLKSS+AFPVTRKANNDITSI SNGGRV+ M+VWP
Sbjct: 1 MAYSMLSSAAVVTSPAQATMVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVNSMQVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|327554106|gb|AEB00556.1| ribulose-1,5-bisphosphate carboxylase/oxygenase
small subunit [Brassica juncea]
Length = 181
Score = 351 bits (898), Expect = 1e-094
Identities = 168/181 (92%), Positives = 171/181 (94%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL++VEL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTEVELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YW MWKLPLFGC DSAQVLKEVQECK EYPN FIRIIGF RQVQCISFIAYKPPSF
Sbjct: 121 YWPMWKLPLFGCADSAQVLKEVQECKTEYPNPFIRIIGFATTRQVQCISFIAYKPPSFPG 180
Query: 587 A 589
A
Sbjct: 181 A 181
>gi|297841389|ref|XP_002888576.1| ribulose bisphosphate carboxylase small chain
1A [Arabidopsis lyrata subsp. lyrata]
Length = 180
Score = 350 bits (897), Expect = 1e-094
Identities = 164/179 (91%), Positives = 173/179 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSA +V SPAQATMVAPFTGLKSSAAFP TRKANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFTGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
P+GKKKFETLSYLPDL+D ELAKEVDYLLRNKWIPCVEFELEHGFVYREHG++PGYYDGR
Sbjct: 61 PVGKKKFETLSYLPDLTDSELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 583
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN+RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPEAFIRIIGFDNSRQVQCISFIAYKPPSFT 179
>gi|15219826|ref|NP_176880.1| ribulose bisphosphate carboxylase small chain 1A
[Arabidopsis thaliana]
Length = 180
Score = 350 bits (896), Expect = 2e-094
Identities = 164/179 (91%), Positives = 172/179 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSA +V SPAQATMVAPF GLKSSAAFP TRKANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+D ELAKEVDYL+RNKWIPCVEFELEHGFVYREHG++PGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 583
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYPNAFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>gi|11762156|gb|AAG40356.1|AF325004_1 At1g67090 [Arabidopsis thaliana]
Length = 180
Score = 347 bits (888), Expect = 2e-093
Identities = 163/179 (91%), Positives = 171/179 (95%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSA +V SPAQATMVAPF GLKSSAAFP TRKANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+D ELAKEVDYL+RNKWIPCVEFELEHGFVYREHG++P YYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPRYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 583
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYPNAFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>gi|119720808|gb|ABL97974.1| ribulose bisphosphate carboxylase [Brassica rapa]
Length = 162
Score = 332 bits (849), Expect = 6e-089
Identities = 154/162 (95%), Positives = 158/162 (97%)
Frame = +2
Query: 104 MVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWPPIGKKKFETLSYLPDLSDV 283
MVAPFTGLKSS+AFPVTRKANNDITSI SNGGRVSCMKVWPP+GKKKFETLSYLPDL++V
Sbjct: 1 MVAPFTGLKSSSAFPVTRKANNDITSIVSNGGRVSCMKVWPPVGKKKFETLSYLPDLTEV 60
Query: 284 ELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVL 463
EL KEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVL
Sbjct: 61 ELGKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGRYWTMWKLPLFGCTDSAQVL 120
Query: 464 KEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTDA 589
KEVQECK EYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT A
Sbjct: 121 KEVQECKTEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTGA 162
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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