BLASTX 7.6.2
Query= UN09800 /QuerySize=775
(774 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G38430.1 | Symbols: | ribulose bisphosphate c... 366 1e-101
TAIR9_protein||AT5G38410.1 | Symbols: | ribulose bisphosphate c... 364 3e-101
TAIR9_protein||AT5G38420.1 | Symbols: | ribulose bisphosphate c... 362 1e-100
TAIR9_protein||AT5G38410.3 | Symbols: | ribulose bisphosphate c... 358 2e-099
TAIR9_protein||AT1G67090.1 | Symbols: RBCS1A | RBCS1A (RIBULOSE ... 350 8e-097
TAIR9_protein||AT5G38410.2 | Symbols: | ribulose bisphosphate c... 342 2e-094
TAIR9_protein||AT1G67090.2 | Symbols: RBCS1A | RBCS1A (RIBULOSE ... 184 8e-047
>TAIR9_protein||AT5G38430.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 1B / RuBisCO small subunit 1B (RBCS-1B) (ATS1B) |
chr5:15384350-15385155 REVERSE
Length = 182
Score = 366 bits (938), Expect = 1e-101
Identities = 174/182 (95%), Positives = 178/182 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSA+FPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+DVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFTD
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTD 180
Query: 587 A* 592
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38410.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 182
Score = 364 bits (934), Expect = 3e-101
Identities = 174/182 (95%), Positives = 177/182 (97%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRK N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 587 A* 592
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38420.1 | Symbols: | ribulose bisphosphate carboxylase
small chain 2B / RuBisCO small subunit 2B (RBCS-2B) (ATS2B) |
chr5:15381203-15381978 REVERSE
Length = 182
Score = 362 bits (929), Expect = 1e-100
Identities = 172/182 (94%), Positives = 176/182 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSM SS AVVTSPAQATMVAPFTGLKSSA+FPVTRKANNDITSI SNGGRVSCMKVWP
Sbjct: 1 MASSMFSSTAVVTSPAQATMVAPFTGLKSSASFPVTRKANNDITSITSNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGNTPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 180
Query: 587 A* 592
A*
Sbjct: 181 A* 182
>TAIR9_protein||AT5G38410.3 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 187
Score = 358 bits (918), Expect = 2e-099
Identities = 174/187 (93%), Positives = 177/187 (94%), Gaps = 5/187 (2%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRK N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE-----HGFVYREHGSTPG 391
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE HGFVYREHG+TPG
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEVINTKHGFVYREHGNTPG 120
Query: 392 YYDGRYWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKP 571
YYDGRYWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKP
Sbjct: 121 YYDGRYWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKP 180
Query: 572 PSFTDA* 592
PSFT+A*
Sbjct: 181 PSFTEA* 187
>TAIR9_protein||AT1G67090.1 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE
CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate
carboxylase | chr1:25048465-25049249 REVERSE
Length = 181
Score = 350 bits (896), Expect = 8e-097
Identities = 164/179 (91%), Positives = 172/179 (96%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSA +V SPAQATMVAPF GLKSSAAFP TRKANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDL+D ELAKEVDYL+RNKWIPCVEFELEHGFVYREHG++PGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGR 120
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFT 583
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYPNAFIRIIGFDN RQVQCISFIAYKPPSFT
Sbjct: 121 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPNAFIRIIGFDNTRQVQCISFIAYKPPSFT 179
>TAIR9_protein||AT5G38410.2 | Symbols: | ribulose bisphosphate carboxylase
small chain 3B / RuBisCO small subunit 3B (RBCS-3B) (ATS3B) |
chr5:15377501-15378306 REVERSE
Length = 175
Score = 342 bits (875), Expect = 2e-094
Identities = 167/182 (91%), Positives = 170/182 (93%), Gaps = 7/182 (3%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRK N DITSIASNGGRVSCMKVWP
Sbjct: 1 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKTNKDITSIASNGGRVSCMKVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELEHGFVYREHGSTPGYYDGR 406
PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFEL EHG+TPGYYDGR
Sbjct: 61 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFEL-------EHGNTPGYYDGR 113
Query: 407 YWTMWKLPLFGCTDSAQVLKEVQECKKEYPNAFIRIIGFDNNRQVQCISFIAYKPPSFTD 586
YWTMWKLPLFGCTDSAQVLKEV+ECKKEYP AFIRIIGFDN RQVQCISFIAYKPPSFT+
Sbjct: 114 YWTMWKLPLFGCTDSAQVLKEVEECKKEYPGAFIRIIGFDNTRQVQCISFIAYKPPSFTE 173
Query: 587 A* 592
A*
Sbjct: 174 A* 175
>TAIR9_protein||AT1G67090.2 | Symbols: RBCS1A | RBCS1A (RIBULOSE BISPHOSPHATE
CARBOXYLASE SMALL CHAIN 1A); copper ion binding / ribulose-bisphosphate
carboxylase | chr1:25048590-25049249 REVERSE
Length = 137
Score = 184 bits (465), Expect = 8e-047
Identities = 88/102 (86%), Positives = 95/102 (93%)
Frame = +2
Query: 47 MASSMLSSAAVVTSPAQATMVAPFTGLKSSAAFPVTRKANNDITSIASNGGRVSCMKVWP 226
MASSMLSSA +V SPAQATMVAPF GLKSSAAFP TRKANNDITSI SNGGRV+CM+VWP
Sbjct: 1 MASSMLSSATMVASPAQATMVAPFNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWP 60
Query: 227 PIGKKKFETLSYLPDLSDVELAKEVDYLLRNKWIPCVEFELE 352
PIGKKKFETLSYLPDL+D ELAKEVDYL+RNKWIPCVEF+ +
Sbjct: 61 PIGKKKFETLSYLPDLTDSELAKEVDYLIRNKWIPCVEFDTD 102
Score = 69 bits (166), Expect = 4e-012
Identities = 30/39 (76%), Positives = 32/39 (82%)
Frame = +3
Query: 348 WSTDLCTVSTEAHPDTMMDGTGQCGNFPCSDALTLLKC* 464
+ TDLCTVST HPDTMMDGTGQCG+FPCS A T LKC*
Sbjct: 99 FDTDLCTVSTVTHPDTMMDGTGQCGSFPCSVAPTPLKC* 137
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,437,431,545
Number of Sequences: 33410
Number of Extensions: 5437431545
Number of Successful Extensions: 200301509
Number of sequences better than 0.0: 0
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