BLASTX 7.6.2
Query= UN09851 /QuerySize=1013
(1012 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 270 1e-072
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 102 6e-022
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 102 6e-022
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 102 6e-022
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 94 2e-019
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 89 5e-018
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 89 5e-018
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 89 5e-018
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 87 1e-017
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 87 1e-017
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 71 1e-012
TAIR9_protein||AT5G23405.1 | Symbols: | high mobility group (HM... 71 1e-012
TAIR9_protein||AT5G23405.2 | Symbols: | high mobility group (HM... 71 1e-012
TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 50 2e-006
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 270 bits (689), Expect = 1e-072
Identities = 141/179 (78%), Positives = 153/179 (85%), Gaps = 3/179 (1%)
Frame = +3
Query: 219 ANNNNNNINTLLRAKDGSAFVRCEGCNKNVAVALISMHNCSLDAKIRVNLEAQVVETQTE 398
A ++N TL RAKDGSAF CEGCNK+VAVALISMHNCSLDAKIRVNLEAQVVETQ E
Sbjct: 19 AETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSLDAKIRVNLEAQVVETQAE 78
Query: 399 AKKKPVERKKSTSDEPKAKRLRKAKDENKKKSSSSSNKPKRPLTAFFIFMADFRKTFKEE 578
AKKKP E+KK+TSD PK KRL+K DE KKSSS+SNKPKRPLTAFFIFM+DFRKTFK E
Sbjct: 79 AKKKPAEKKKTTSDGPKPKRLKKTNDE--KKSSSTSNKPKRPLTAFFIFMSDFRKTFKSE 136
Query: 579 NPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
+ + KD AK GGEKWKSL EEEKKVYLDK+AELKAEYNKSLES NDADEEE DEEK+
Sbjct: 137 HNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSLES-NDADEEEEDEEKQ 194
Score = 57 bits (137), Expect = 1e-008
Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
Frame = +2
Query: 749 EEADDVDEAEEKQSDEAEEKQTDEAEENEAENKEAEGK-EEEDEILDDF* 895
+++DDVD+AEEKQ D+ +E + E E + + KEAEGK EEE+EILDD+*
Sbjct: 193 KQSDDVDDAEEKQVDDDDEVEEKEVENTDDDKKEAEGKEEEEEEILDDY* 242
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 102 bits (252), Expect = 6e-022
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +3
Query: 381 VETQTEAKKKPVERKKSTSDEPKAKRLRKAKDENKKKSSSSSNKPKRPLTAFFIFMADFR 560
V+T EA KPV+ +K + A++ K + +KK+ NKPKR +AFF+F+ DFR
Sbjct: 10 VKTTKEA-LKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 68
Query: 561 KTFKEENPDA-GVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEE 737
TFK+ENP+ V V K GG+KWKS+ + EK Y +K+A+ KAEY K +++ N EE
Sbjct: 69 VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128
Query: 738 VDEEKK 755
DE +K
Sbjct: 129 SDESEK 134
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 102 bits (252), Expect = 6e-022
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +3
Query: 381 VETQTEAKKKPVERKKSTSDEPKAKRLRKAKDENKKKSSSSSNKPKRPLTAFFIFMADFR 560
V+T EA KPV+ +K + A++ K + +KK+ NKPKR +AFF+F+ DFR
Sbjct: 10 VKTTKEA-LKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 68
Query: 561 KTFKEENPDA-GVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEE 737
TFK+ENP+ V V K GG+KWKS+ + EK Y +K+A+ KAEY K +++ N EE
Sbjct: 69 VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128
Query: 738 VDEEKK 755
DE +K
Sbjct: 129 SDESEK 134
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 102 bits (252), Expect = 6e-022
Identities = 55/126 (43%), Positives = 79/126 (62%), Gaps = 2/126 (1%)
Frame = +3
Query: 381 VETQTEAKKKPVERKKSTSDEPKAKRLRKAKDENKKKSSSSSNKPKRPLTAFFIFMADFR 560
V+T EA KPV+ +K + A++ K + +KK+ NKPKR +AFF+F+ DFR
Sbjct: 10 VKTTKEA-LKPVDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFR 68
Query: 561 KTFKEENPDA-GVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEE 737
TFK+ENP+ V V K GG+KWKS+ + EK Y +K+A+ KAEY K +++ N EE
Sbjct: 69 VTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEG 128
Query: 738 VDEEKK 755
DE +K
Sbjct: 129 SDESEK 134
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 94 bits (231), Expect = 2e-019
Identities = 53/140 (37%), Positives = 82/140 (58%), Gaps = 13/140 (9%)
Frame = +3
Query: 441 EPKAKRLRKAKDENK--KKSSSSSNKPKRPLTAFFIFMADFRKTFKEENP-DAGVKDVAK 611
E ++ +L K K K ++ NKPKRP +AFF+FM DFR T+KEE+P + V V K
Sbjct: 9 ETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGK 68
Query: 612 QGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKKLMMLMRLRRNSL 791
GGEKWKSL + EK Y+ K+ + K EY K++++ N KKL++ +R RN
Sbjct: 69 AGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYN----------KKLVIALRKMRNLT 118
Query: 792 MRLRRSKLMRLRRMKLRTKR 851
+ +R + + RM ++ ++
Sbjct: 119 SQFQRLTMRMMLRMAVKRRK 138
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 89 bits (218), Expect = 5e-018
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +3
Query: 408 KPVERKKSTSDEPKAKRLRKAKDENKKKSSSSS-NKPKRPLTAFFIFMADFRKTFKEENP 584
K + K T + + AK + K+++ NKPKRP +AFF+FM DFR+TFK+ENP
Sbjct: 2 KGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENP 61
Query: 585 -DAGVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
+ V V K G+KWKSL + EK Y+ K+ + K EY K++++ N EE E+++
Sbjct: 62 KNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEE 119
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 89 bits (218), Expect = 5e-018
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +3
Query: 408 KPVERKKSTSDEPKAKRLRKAKDENKKKSSSSS-NKPKRPLTAFFIFMADFRKTFKEENP 584
K + K T + + AK + K+++ NKPKRP +AFF+FM DFR+TFK+ENP
Sbjct: 2 KGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENP 61
Query: 585 -DAGVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
+ V V K G+KWKSL + EK Y+ K+ + K EY K++++ N EE E+++
Sbjct: 62 KNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEE 119
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 89 bits (218), Expect = 5e-018
Identities = 47/118 (39%), Positives = 71/118 (60%), Gaps = 2/118 (1%)
Frame = +3
Query: 408 KPVERKKSTSDEPKAKRLRKAKDENKKKSSSSS-NKPKRPLTAFFIFMADFRKTFKEENP 584
K + K T + + AK + K+++ NKPKRP +AFF+FM DFR+TFK+ENP
Sbjct: 2 KGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKENP 61
Query: 585 -DAGVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
+ V V K G+KWKSL + EK Y+ K+ + K EY K++++ N EE E+++
Sbjct: 62 KNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEGPKEDEE 119
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 87 bits (215), Expect = 1e-017
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 441 EPKAKRLRKAKDENK--KKSSSSSNKPKRPLTAFFIFMADFRKTFKEENP-DAGVKDVAK 611
E ++ +L K K K ++ NKPKRP +AFF+FM DFR T+KEE+P + V V K
Sbjct: 9 ETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGK 68
Query: 612 QGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
GGEKWKSL + EK Y+ K+ + K EY K++++ N EE E+++
Sbjct: 69 AGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEE 116
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 87 bits (215), Expect = 1e-017
Identities = 47/108 (43%), Positives = 68/108 (62%), Gaps = 3/108 (2%)
Frame = +3
Query: 441 EPKAKRLRKAKDENK--KKSSSSSNKPKRPLTAFFIFMADFRKTFKEENP-DAGVKDVAK 611
E ++ +L K K K ++ NKPKRP +AFF+FM DFR T+KEE+P + V V K
Sbjct: 9 ETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGK 68
Query: 612 QGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
GGEKWKSL + EK Y+ K+ + K EY K++++ N EE E+++
Sbjct: 69 AGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEGPKEDEE 116
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 71 bits (172), Expect = 1e-012
Identities = 36/99 (36%), Positives = 51/99 (51%)
Frame = +3
Query: 423 KKSTSDEPKAKRLRKAKDENKKKSSSSSNKPKRPLTAFFIFMADFRKTFKEENPDAGVKD 602
KK + K+ ++ KK + NKPK+P +++F+F D RK+ EE+P
Sbjct: 342 KKKEKTDNIIKKTKETAKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINNST 401
Query: 603 VAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNN 719
V KW L EEEK+VY K+AEL Y K +E N
Sbjct: 402 VTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYN 440
Score = 55 bits (130), Expect = 8e-008
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 4/170 (2%)
Frame = +3
Query: 369 EAQVVETQTEAKK-KPVERKKSTSDEPKAKRLRKAKDENK-KKSSSSSNKPKRPLTAFFI 542
E + + +TE KK + ++ K ++ L + ++E K KK + KRP T + +
Sbjct: 79 EVEQEKLKTELKKLQKMKEFKPNMTFAFSQSLAQTEEEKKGKKKKKDCAETKRPSTPYIL 138
Query: 543 FMADFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNND 722
+ D K++NP+A K+ + G KWK + EEKK Y +K K Y + +
Sbjct: 139 WCKDNWNEVKKQNPEADFKETSNILGAKWKGISAEEKKPYEEKYQADKEAYLQVITKEKR 198
Query: 723 ADE--EEVDEEKKLMMLMRLRRNSLMRLRRSKLMRLRRMKLRTKRLKVKK 866
E + +D+E+K M L L ++ ++ ++ K LK K+
Sbjct: 199 EREAMKLLDDEQKQKTAMELLDQYLHFVQEAEHDNKKKAKKIKDPLKPKQ 248
>TAIR9_protein||AT5G23405.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr5:7883097-7884243 REVERSE
Length = 150
Score = 71 bits (172), Expect = 1e-012
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Frame = +3
Query: 465 KAKDENKKKSSSSSNKPKRPLTAFFIFMADFRKTFKEENPDAGVKDVAKQGGEKWKSLDE 644
K K NKKKS++S LT F +FM FRK+F+ + A VK+ +K G E WKS+ E
Sbjct: 54 KKKPTNKKKSTTS-------LTDFAVFMNHFRKSFRTDYNGALVKEGSKIGWEMWKSMTE 106
Query: 645 EEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
+EKK YLDK+A+ + E ++E D ++ D E K
Sbjct: 107 DEKKDYLDKAADEEDEDEDTVEEQADDSDDAEDNEVK 143
>TAIR9_protein||AT5G23405.2 | Symbols: | high mobility group (HMG1/2) family
protein | chr5:7883097-7884243 REVERSE
Length = 149
Score = 71 bits (172), Expect = 1e-012
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 7/97 (7%)
Frame = +3
Query: 465 KAKDENKKKSSSSSNKPKRPLTAFFIFMADFRKTFKEENPDAGVKDVAKQGGEKWKSLDE 644
K K NKKKS++S LT F +FM FRK+F+ + A VK+ +K G E WKS+ E
Sbjct: 53 KKKPTNKKKSTTS-------LTDFAVFMNHFRKSFRTDYNGALVKEGSKIGWEMWKSMTE 105
Query: 645 EEKKVYLDKSAELKAEYNKSLESNNDADEEEVDEEKK 755
+EKK YLDK+A+ + E ++E D ++ D E K
Sbjct: 106 DEKKDYLDKAADEEDEDEDTVEEQADDSDDAEDNEVK 142
>TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:12390228-12392516 FORWARD
Length = 457
Score = 50 bits (119), Expect = 2e-006
Identities = 40/168 (23%), Positives = 77/168 (45%), Gaps = 3/168 (1%)
Frame = +3
Query: 369 EAQVVETQTEAKKKPVERKKSTSDEPKAKRLRKAKDEN-KKKSSSSSNKPKRPLTAFFIF 545
E + ++ + + +K E K + + L +A+ E KK + KRP +++ ++
Sbjct: 89 EQEKLKVELKKLQKMKEFKPNMTFACGQSSLTQAEQEKANKKKKKDCPETKRPSSSYVLW 148
Query: 546 MADFRKTFKEENPDAGVKDVAKQGGEKWKSLDEEEKKVYLDKSAELKAEYNKSLESNNDA 725
D K+ENP+A K+ + G KWKSL E+KK Y ++ K Y + +
Sbjct: 149 CKDQWTEVKKENPEADFKETSNILGAKWKSLSAEDKKPYEERYQVEKEAYLQVIAKEKRE 208
Query: 726 DE--EEVDEEKKLMMLMRLRRNSLMRLRRSKLMRLRRMKLRTKRLKVK 863
E + +++++K M L L ++ ++ ++ K LK K
Sbjct: 209 KEAMKLLEDDQKQRTAMELLDQYLNFVQEAEQDNKKKNKKEKDPLKPK 256
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,437,431,545
Number of Sequences: 33410
Number of Extensions: 5437431545
Number of Successful Extensions: 200301509
Number of sequences better than 0.0: 0
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