BLASTX 7.6.2
Query= UN09914 /QuerySize=939
(938 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabi... 380 3e-103
gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis ... 355 7e-096
gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis ... 355 7e-096
gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thal... 355 7e-096
gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thal... 355 7e-096
gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thali... 355 7e-096
gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabid... 354 2e-095
gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT... 346 5e-093
gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast,... 325 7e-087
gi|224119514|ref|XP_002318093.1| predicted protein [Populus tric... 324 1e-086
gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vini... 324 2e-086
gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B... 322 5e-086
gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Perse... 322 6e-086
gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein... 322 6e-086
gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vini... 318 1e-084
gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 ... 316 3e-084
gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein... 316 3e-084
gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum c... 309 4e-082
gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Me... 309 5e-082
gi|224133740|ref|XP_002321649.1| predicted protein [Populus tric... 309 5e-082
>gi|297799522|ref|XP_002867645.1| RNA-binding protein cp31 [Arabidopsis lyrata
subsp. lyrata]
Length = 305
Score = 380 bits (974), Expect = 3e-103
Identities = 192/207 (92%), Positives = 196/207 (94%), Gaps = 2/207 (0%)
Frame = +2
Query: 8 EENEP--EATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEV 181
EENE E+ +EGDV EG +FPEP EEAKLFVGNLAYDVDSQALAMLFEQ GTVEIAEV
Sbjct: 99 EENEDSFESQDAEGDVSEGAEFPEPSEEAKLFVGNLAYDVDSQALAMLFEQAGTVEIAEV 158
Query: 182 IYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYE 361
IYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYE
Sbjct: 159 IYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYE 218
Query: 362 PAFRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDA 541
PAFRVYVGNLPWDVDNGRLEQVFSEHGKV+EARVVYDRETGRSRGFGFVTMSNE ELNDA
Sbjct: 219 PAFRVYVGNLPWDVDNGRLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSNENELNDA 278
Query: 542 IAALDGQNMEGRAIRVNVAEERPRRGF 622
IAALDGQNMEGRAIRVNVAEERPRRGF
Sbjct: 279 IAALDGQNMEGRAIRVNVAEERPRRGF 305
>gi|681906|dbj|BAA06520.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 314
Score = 355 bits (910), Expect = 7e-096
Identities = 179/206 (86%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Frame = +2
Query: 8 EENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
E +E E SEG V E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQ GTVEIAEVIY
Sbjct: 109 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 168
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPA
Sbjct: 169 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 228
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FRVYVGNLPWDVDNGRLEQ+FSEHGKV+EARVVYDRETGRSRGFGFVTMS+ ELN+AI+
Sbjct: 229 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 288
Query: 548 ALDGQNMEGRAIRVNVAEER-PRRGF 622
ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 289 ALDGQNLEGRAIRVNVAEERPPRRGY 314
>gi|681908|dbj|BAA06521.1| RNA-binding protein cp31 [Arabidopsis thaliana]
Length = 304
Score = 355 bits (910), Expect = 7e-096
Identities = 179/206 (86%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Frame = +2
Query: 8 EENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
E +E E SEG V E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQ GTVEIAEVIY
Sbjct: 99 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 158
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPA
Sbjct: 159 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 218
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FRVYVGNLPWDVDNGRLEQ+FSEHGKV+EARVVYDRETGRSRGFGFVTMS+ ELN+AI+
Sbjct: 219 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 278
Query: 548 ALDGQNMEGRAIRVNVAEER-PRRGF 622
ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 279 ALDGQNLEGRAIRVNVAEERPPRRGY 304
>gi|15233980|ref|NP_194208.1| ribonucleoprotein [Arabidopsis thaliana]
Length = 329
Score = 355 bits (910), Expect = 7e-096
Identities = 179/206 (86%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Frame = +2
Query: 8 EENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
E +E E SEG V E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQ GTVEIAEVIY
Sbjct: 124 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 183
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPA
Sbjct: 184 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 243
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FRVYVGNLPWDVDNGRLEQ+FSEHGKV+EARVVYDRETGRSRGFGFVTMS+ ELN+AI+
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303
Query: 548 ALDGQNMEGRAIRVNVAEER-PRRGF 622
ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 304 ALDGQNLEGRAIRVNVAEERPPRRGY 329
>gi|475719|gb|AAA18379.1| RNA-binding protein 2 [Arabidopsis thaliana]
Length = 315
Score = 355 bits (910), Expect = 7e-096
Identities = 179/206 (86%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Frame = +2
Query: 8 EENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
E +E E SEG V E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQ GTVEIAEVIY
Sbjct: 110 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 169
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPA
Sbjct: 170 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 229
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FRVYVGNLPWDVDNGRLEQ+FSEHGKV+EARVVYDRETGRSRGFGFVTMS+ ELN+AI+
Sbjct: 230 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 289
Query: 548 ALDGQNMEGRAIRVNVAEER-PRRGF 622
ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 290 ALDGQNLEGRAIRVNVAEERPPRRGY 315
>gi|510240|emb|CAA43420.1| RNA binding protein [Arabidopsis thaliana]
Length = 310
Score = 355 bits (910), Expect = 7e-096
Identities = 179/206 (86%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Frame = +2
Query: 8 EENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
E +E E SEG V E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQ GTVEIAEVIY
Sbjct: 105 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 164
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPA
Sbjct: 165 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 224
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FRVYVGNLPWDVDNGRLEQ+FSEHGKV+EARVVYDRETGRSRGFGFVTMS+ ELN+AI+
Sbjct: 225 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 284
Query: 548 ALDGQNMEGRAIRVNVAEER-PRRGF 622
ALDGQN+EGRAIRVNVAEER PRRG+
Sbjct: 285 ALDGQNLEGRAIRVNVAEERPPRRGY 310
>gi|15294254|gb|AAK95304.1|AF410318_1 AT4g24770/F22K18_30 [Arabidopsis
thaliana]
Length = 329
Score = 354 bits (906), Expect = 2e-095
Identities = 177/203 (87%), Positives = 188/203 (92%)
Frame = +2
Query: 8 EENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
E +E E SEG V E +FPEP EEAKLFVGNLAYDV+SQALAMLFEQ GTVEIAEVIY
Sbjct: 124 EGDESEGDVSEGAVSERAEFPEPSEEAKLFVGNLAYDVNSQALAMLFEQAGTVEIAEVIY 183
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETDQSRGFGFVTMS+V+EAETAVEKFNRYDLNGRLLTVNKAAPRGSRPER PRVYEPA
Sbjct: 184 NRETDQSRGFGFVTMSSVDEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERAPRVYEPA 243
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FRVYVGNLPWDVDNGRLEQ+FSEHGKV+EARVVYDRETGRSRGFGFVTMS+ ELN+AI+
Sbjct: 244 FRVYVGNLPWDVDNGRLEQLFSEHGKVVEARVVYDRETGRSRGFGFVTMSDVDELNEAIS 303
Query: 548 ALDGQNMEGRAIRVNVAEERPRR 616
ALDGQN+EGRAIRVNVAEERP R
Sbjct: 304 ALDGQNLEGRAIRVNVAEERPPR 326
>gi|297795791|ref|XP_002865780.1| hypothetical protein ARALYDRAFT_918033
[Arabidopsis lyrata subsp. lyrata]
Length = 291
Score = 346 bits (885), Expect = 5e-093
Identities = 168/193 (87%), Positives = 182/193 (94%)
Frame = +2
Query: 44 DVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRETDQSRGFGF 223
D +GG FPEPPEEAKLFVGNL YDVDSQALAMLFEQ GTVEI+EVIYNR+TDQSRGFGF
Sbjct: 99 DTEDGGKFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGF 158
Query: 224 VTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDV 403
VTMSTVEEA+ AVEKFNRY++NGRLLTVN AAPRGSRPERQPR Y+ AFR+YVGNLPWDV
Sbjct: 159 VTMSTVEEAKKAVEKFNRYEVNGRLLTVNIAAPRGSRPERQPRQYDAAFRIYVGNLPWDV 218
Query: 404 DNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAI 583
DN RL+QVFSEHGKV++ARVVYDRETGRSRGFGFVTMSNE E+NDAIAALDGQN+EGRAI
Sbjct: 219 DNDRLQQVFSEHGKVVDARVVYDRETGRSRGFGFVTMSNENEVNDAIAALDGQNLEGRAI 278
Query: 584 RVNVAEERPRRGF 622
+VNVAEERPRRGF
Sbjct: 279 KVNVAEERPRRGF 291
>gi|255540443|ref|XP_002511286.1| ribonucleoprotein, chloroplast, putative
[Ricinus communis]
Length = 319
Score = 325 bits (832), Expect = 7e-087
Identities = 161/204 (78%), Positives = 180/204 (88%), Gaps = 1/204 (0%)
Frame = +2
Query: 11 ENEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYN 190
+ E E EG E F EPPE+AK+FVGNL YDVDSQ LAMLFEQ GTVEIAEVIYN
Sbjct: 117 QGEEEEEVFEGSEPEEA-FEEPPEDAKIFVGNLPYDVDSQKLAMLFEQAGTVEIAEVIYN 175
Query: 191 RETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAF 370
RETD SRGFGFV+MSTVEEAE AVE F+R+DL+GRLLTVNKAAPRGSRPER PRV+EP +
Sbjct: 176 RETDTSRGFGFVSMSTVEEAEKAVEMFHRHDLDGRLLTVNKAAPRGSRPERPPRVFEPGY 235
Query: 371 RVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAA 550
R+YVGNLPWDVDN RLEQ+FSEHGKV++ARVVYDR+TGRSRGFGFVTMS ETELNDAIAA
Sbjct: 236 RIYVGNLPWDVDNARLEQIFSEHGKVVDARVVYDRDTGRSRGFGFVTMSTETELNDAIAA 295
Query: 551 LDGQNMEGRAIRVNVAEERPRRGF 622
LDG++++GRAIRVNVAE+RPRR F
Sbjct: 296 LDGRSLDGRAIRVNVAEQRPRRNF 319
>gi|224119514|ref|XP_002318093.1| predicted protein [Populus trichocarpa]
Length = 327
Score = 324 bits (830), Expect = 1e-086
Identities = 160/200 (80%), Positives = 176/200 (88%)
Frame = +2
Query: 23 EATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRETD 202
EA EG+ G+ F EPPEEAK+FVGNL YDVDS+ LAMLFEQ GTVEIAEVIYNRETD
Sbjct: 128 EAIRGEGESGDEEGFVEPPEEAKIFVGNLPYDVDSEKLAMLFEQAGTVEIAEVIYNRETD 187
Query: 203 QSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYV 382
SRGFGFVTMSTVEE+E AVE +RYDL+GR LTVNKAAPRGSRPER PRV EP +R+YV
Sbjct: 188 TSRGFGFVTMSTVEESEKAVEMLHRYDLDGRFLTVNKAAPRGSRPERPPRVSEPGYRIYV 247
Query: 383 GNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQ 562
GNLPWDVD+GRLEQ+FSEHGKV+ ARVV+DRET RSRGFGFVTMS E+ELNDAIAALDGQ
Sbjct: 248 GNLPWDVDSGRLEQIFSEHGKVVSARVVFDRETNRSRGFGFVTMSTESELNDAIAALDGQ 307
Query: 563 NMEGRAIRVNVAEERPRRGF 622
N++GR IRVNVAEERPRR F
Sbjct: 308 NLDGRPIRVNVAEERPRRTF 327
>gi|296087572|emb|CBI34828.3| unnamed protein product [Vitis vinifera]
Length = 272
Score = 324 bits (828), Expect = 2e-086
Identities = 160/208 (76%), Positives = 182/208 (87%), Gaps = 5/208 (2%)
Frame = +2
Query: 2 AVEENEPEATFSEGDVGEGGD--FPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIA 175
A +E E E +G+ EG + + EPPEEAKLFVGNL YD+DS+ LA LF++ G VEIA
Sbjct: 66 AQQEEEEE---KDGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIA 122
Query: 176 EVIYNRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRV 355
EVIYNRETDQSRGFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAPRGSRPER P+
Sbjct: 123 EVIYNRETDQSRGFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQA 182
Query: 356 YEPAFRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELN 535
+EP+FR+YVGNLPW VD+ RLEQVFSEHGKV++ARVVYDR+T RSRGFGFVTMS+ETELN
Sbjct: 183 FEPSFRIYVGNLPWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELN 242
Query: 536 DAIAALDGQNMEGRAIRVNVAEERPRRG 619
DAIAALDGQ+++GRAIRVNVAEERPRRG
Sbjct: 243 DAIAALDGQSLDGRAIRVNVAEERPRRG 270
>gi|15240641|ref|NP_199836.1| chloroplast RNA-binding protein 31B [Arabidopsis
thaliana]
Length = 289
Score = 322 bits (825), Expect = 5e-086
Identities = 158/188 (84%), Positives = 175/188 (93%)
Frame = +2
Query: 53 EGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRETDQSRGFGFVTM 232
+G FPEPPEEAKLFVGNL YDVDSQALAMLFEQ GTVEI+EVIYNR+TDQSRGFGFVTM
Sbjct: 102 DGVGFPEPPEEAKLFVGNLPYDVDSQALAMLFEQAGTVEISEVIYNRDTDQSRGFGFVTM 161
Query: 233 STVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNLPWDVDNG 412
STVEEAE AVEKFN +++NGR LTVN+AAPRGSRPERQPRVY+ AFR+YVGNLPWDVD+G
Sbjct: 162 STVEEAEKAVEKFNSFEVNGRRLTVNRAAPRGSRPERQPRVYDAAFRIYVGNLPWDVDSG 221
Query: 413 RLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNMEGRAIRVN 592
RLE++FSEHGKV++ARVV DRETGRSRGFGFV MSNE E+N AIAALDGQN+EGRAI+VN
Sbjct: 222 RLERLFSEHGKVVDARVVSDRETGRSRGFGFVQMSNENEVNVAIAALDGQNLEGRAIKVN 281
Query: 593 VAEERPRR 616
VAEER RR
Sbjct: 282 VAEERTRR 289
>gi|19032260|emb|CAD18921.1| RNA-binding protein precursor [Persea americana]
Length = 300
Score = 322 bits (824), Expect = 6e-086
Identities = 160/195 (82%), Positives = 176/195 (90%), Gaps = 2/195 (1%)
Frame = +2
Query: 32 FSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRETDQSR 211
F EG GE +P PPEEAKLFVGNL YDVD QALA LF+Q GTVE+AEVIYNRETDQSR
Sbjct: 105 FVEG--GEEDSYPLPPEEAKLFVGNLPYDVDHQALAELFDQAGTVEVAEVIYNRETDQSR 162
Query: 212 GFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNL 391
GFGFVTMSTVEEAE AVE FNRYD+NGRLLTVNKAAPRG+R +R PR +EPAFR+YVGNL
Sbjct: 163 GFGFVTMSTVEEAEKAVEMFNRYDINGRLLTVNKAAPRGARVDRPPRAFEPAFRMYVGNL 222
Query: 392 PWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNME 571
PW VD+ RLEQVFSEHGKV+EARVVYDRETGRSRGFGFVTMS +TEL+DAIAALDGQ+++
Sbjct: 223 PWQVDDARLEQVFSEHGKVVEARVVYDRETGRSRGFGFVTMSTQTELDDAIAALDGQSLD 282
Query: 572 GRAIRVNVAEERPRR 616
GRAIRVNVAE+RPRR
Sbjct: 283 GRAIRVNVAEDRPRR 297
>gi|225452270|ref|XP_002270233.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 312
Score = 322 bits (824), Expect = 6e-086
Identities = 156/196 (79%), Positives = 177/196 (90%), Gaps = 2/196 (1%)
Frame = +2
Query: 38 EGDVGEGGD--FPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRETDQSR 211
+G+ EG + + EPPEEAKLFVGNL YD+DS+ LA LF++ G VEIAEVIYNRETDQSR
Sbjct: 115 DGEESEGSEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIAEVIYNRETDQSR 174
Query: 212 GFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYVGNL 391
GFGF+TMSTVEEAE AVE FNRYDLNGR LTVNKAAPRGSRPER P+ +EP+FR+YVGNL
Sbjct: 175 GFGFITMSTVEEAEKAVEMFNRYDLNGRFLTVNKAAPRGSRPERPPQAFEPSFRIYVGNL 234
Query: 392 PWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQNME 571
PW VD+ RLEQVFSEHGKV++ARVVYDR+T RSRGFGFVTMS+ETELNDAIAALDGQ+++
Sbjct: 235 PWQVDDARLEQVFSEHGKVVDARVVYDRDTQRSRGFGFVTMSSETELNDAIAALDGQSLD 294
Query: 572 GRAIRVNVAEERPRRG 619
GRAIRVNVAEERPRRG
Sbjct: 295 GRAIRVNVAEERPRRG 310
>gi|297733663|emb|CBI14910.3| unnamed protein product [Vitis vinifera]
Length = 306
Score = 318 bits (813), Expect = 1e-084
Identities = 160/203 (78%), Positives = 181/203 (89%), Gaps = 2/203 (0%)
Frame = +2
Query: 11 ENEPEATFSEGDVGEGGD-FPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIY 187
ENE EA +G V +G D + EPPEEAK+FVGNL YDVDS+ LA LFEQ G VEIAEVIY
Sbjct: 102 ENE-EAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIY 160
Query: 188 NRETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPA 367
NRETD+SRGFGFV+MSTVEEAE AV+ F+RY+L+GRLLTVNKAAPRGS+PER PRV+EPA
Sbjct: 161 NRETDRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPA 220
Query: 368 FRVYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIA 547
FR+YVGNLPWDVD+ RLEQVFSEHGKV+EARVV+DRETGRSRGFGFVTMS++TEL DAIA
Sbjct: 221 FRMYVGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIA 280
Query: 548 ALDGQNMEGRAIRVNVAEERPRR 616
A DGQ ++GR IRVNVAEERPRR
Sbjct: 281 ATDGQTLDGRTIRVNVAEERPRR 303
>gi|147838354|emb|CAN61133.1| hypothetical protein VITISV_039575 [Vitis
vinifera]
Length = 1122
Score = 316 bits (809), Expect = 3e-084
Identities = 157/199 (78%), Positives = 178/199 (89%), Gaps = 1/199 (0%)
Frame = +2
Query: 23 EATFSEGDVGEGGD-FPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRET 199
EA +G V +G D + EPPEEAK+FVGNL YDVDS+ LA LFEQ G VEIAEVIYNRET
Sbjct: 921 EAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRET 980
Query: 200 DQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVY 379
D+SRGFGFV+MSTVEEAE AV+ F+RY+L+GRLLTVNKAAPRGS+PER PRV+EPAFR+Y
Sbjct: 981 DRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMY 1040
Query: 380 VGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDG 559
VGNLPWDVD+ RLEQVFSEHGKV+EARVV+DRETGRSRGFGFVTMS++TEL DAIAA DG
Sbjct: 1041 VGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDG 1100
Query: 560 QNMEGRAIRVNVAEERPRR 616
Q ++GR IRVNVAEERPRR
Sbjct: 1101 QTLDGRTIRVNVAEERPRR 1119
>gi|225456840|ref|XP_002278832.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 327
Score = 316 bits (809), Expect = 3e-084
Identities = 157/199 (78%), Positives = 178/199 (89%), Gaps = 1/199 (0%)
Frame = +2
Query: 23 EATFSEGDVGEGGD-FPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRET 199
EA +G V +G D + EPPEEAK+FVGNL YDVDS+ LA LFEQ G VEIAEVIYNRET
Sbjct: 126 EAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIAEVIYNRET 185
Query: 200 DQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVY 379
D+SRGFGFV+MSTVEEAE AV+ F+RY+L+GRLLTVNKAAPRGS+PER PRV+EPAFR+Y
Sbjct: 186 DRSRGFGFVSMSTVEEAEKAVDMFHRYELDGRLLTVNKAAPRGSQPERPPRVFEPAFRMY 245
Query: 380 VGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDG 559
VGNLPWDVD+ RLEQVFSEHGKV+EARVV+DRETGRSRGFGFVTMS++TEL DAIAA DG
Sbjct: 246 VGNLPWDVDSARLEQVFSEHGKVVEARVVFDRETGRSRGFGFVTMSSQTELEDAIAATDG 305
Query: 560 QNMEGRAIRVNVAEERPRR 616
Q ++GR IRVNVAEERPRR
Sbjct: 306 QTLDGRTIRVNVAEERPRR 324
>gi|388621|gb|AAA33039.1| RNA-binding protein [Mesembryanthemum crystallinum]
Length = 289
Score = 309 bits (791), Expect = 4e-082
Identities = 152/200 (76%), Positives = 173/200 (86%)
Frame = +2
Query: 23 EATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNRETD 202
EA S+ EG F EPPE+AKLFVGNL +DVDS+ LA +FE G VEIAEVIYNRETD
Sbjct: 90 EAQVSDFGSDEGEGFQEPPEDAKLFVGNLPFDVDSEKLAQIFEGAGVVEIAEVIYNRETD 149
Query: 203 QSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFRVYV 382
+SRGFGFVTMSTVEEAE AVE ++++++NGR LTVNKAAPRGSRPER PR YEP+FRVYV
Sbjct: 150 RSRGFGFVTMSTVEEAEKAVELYHKFEVNGRFLTVNKAAPRGSRPERAPREYEPSFRVYV 209
Query: 383 GNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAALDGQ 562
GNLPWDVD+ RLEQVFSEHGKV+ ARVV DRETGRSRGF FVTM++E+E+N+AI ALDGQ
Sbjct: 210 GNLPWDVDDARLEQVFSEHGKVLSARVVSDRETGRSRGFAFVTMASESEMNEAIGALDGQ 269
Query: 563 NMEGRAIRVNVAEERPRRGF 622
+EGRAIRVNVAEERPRR F
Sbjct: 270 TLEGRAIRVNVAEERPRRSF 289
>gi|168274276|dbj|BAG09558.1| chloroplast RNA binding protein [Mesembryanthemum
crystallinum]
Length = 306
Score = 309 bits (790), Expect = 5e-082
Identities = 155/203 (76%), Positives = 172/203 (84%), Gaps = 7/203 (3%)
Frame = +2
Query: 14 NEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNR 193
NE E +G F EPPEEAKLFVGNL YDVDS+ LA +F+ G VEIAEVIYNR
Sbjct: 111 NEDEEESEQG-------FSEPPEEAKLFVGNLPYDVDSERLAQIFDGAGVVEIAEVIYNR 163
Query: 194 ETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFR 373
ETD+SRGFGFVTMSTVEEAE AVE N +D+NGRLLTVNKAAPRGSRPER PR +EP+ R
Sbjct: 164 ETDRSRGFGFVTMSTVEEAEKAVEMLNGFDMNGRLLTVNKAAPRGSRPERPPREFEPSCR 223
Query: 374 VYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAAL 553
VYVGNLPWDVDN RLEQVFSEHGKV+ ARVV DRETGRSRGFGFV+M++E+E+NDAIAAL
Sbjct: 224 VYVGNLPWDVDNARLEQVFSEHGKVLSARVVSDRETGRSRGFGFVSMASESEMNDAIAAL 283
Query: 554 DGQNMEGRAIRVNVAEERPRRGF 622
DGQ ++GRAIRVNVAEERPRR F
Sbjct: 284 DGQTLDGRAIRVNVAEERPRRAF 306
>gi|224133740|ref|XP_002321649.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 309 bits (790), Expect = 5e-082
Identities = 152/201 (75%), Positives = 176/201 (87%)
Frame = +2
Query: 14 NEPEATFSEGDVGEGGDFPEPPEEAKLFVGNLAYDVDSQALAMLFEQTGTVEIAEVIYNR 193
+E EA EG+ G+ F EPPEEAK++VGNL YDV S+ LAMLF+Q GTVEI+EVIYN
Sbjct: 92 SETEAVRGEGERGDEEGFVEPPEEAKIYVGNLPYDVTSEKLAMLFDQAGTVEISEVIYNT 151
Query: 194 ETDQSRGFGFVTMSTVEEAETAVEKFNRYDLNGRLLTVNKAAPRGSRPERQPRVYEPAFR 373
ETD SRGFGFVTMSTVEE++ A+E FNRY+L+GRLLTVNKAAPRGSRPER PRV EP++R
Sbjct: 152 ETDTSRGFGFVTMSTVEESDKAIEMFNRYNLDGRLLTVNKAAPRGSRPERPPRVSEPSYR 211
Query: 374 VYVGNLPWDVDNGRLEQVFSEHGKVMEARVVYDRETGRSRGFGFVTMSNETELNDAIAAL 553
+YVGNLPW VD+GRLE+VFSEHGKV+ A+VV D ETGRSRGFGFVTMS+E+ELNDAIAAL
Sbjct: 212 IYVGNLPWGVDSGRLEEVFSEHGKVVSAQVVSDWETGRSRGFGFVTMSSESELNDAIAAL 271
Query: 554 DGQNMEGRAIRVNVAEERPRR 616
DGQ ++GRAIRVNVA ERPRR
Sbjct: 272 DGQELDGRAIRVNVAAERPRR 292
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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