BLASTX 7.6.2
Query= UN09978 /QuerySize=539
(538 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297808085|ref|XP_002871926.1| ribosomal protein L36 family pr... 181 7e-044
gi|15241288|ref|NP_197518.1| Ribosomal protein L36 [Arabidopsis ... 180 1e-043
gi|189096154|pdb|3BBO|6 Chain 6, Homology Model For The Spinach ... 175 3e-042
gi|225445521|ref|XP_002285234.1| PREDICTED: hypothetical protein... 127 1e-027
gi|147794982|emb|CAN71764.1| hypothetical protein VITISV_039227 ... 124 6e-027
gi|118481183|gb|ABK92543.1| unknown [Populus trichocarpa] 116 2e-024
gi|224144216|ref|XP_002325223.1| predicted protein [Populus tric... 116 2e-024
gi|224090431|ref|XP_002308985.1| predicted protein [Populus tric... 111 5e-023
gi|255628469|gb|ACU14579.1| unknown [Glycine max] 96 2e-018
gi|255629137|gb|ACU14913.1| unknown [Glycine max] 95 5e-018
gi|116778532|gb|ABK20897.1| unknown [Picea sitchensis] 85 4e-015
gi|168027473|ref|XP_001766254.1| predicted protein [Physcomitrel... 82 3e-014
gi|255567043|ref|XP_002524504.1| 50S ribosomal protein L36, puta... 75 3e-012
gi|242032533|ref|XP_002463661.1| hypothetical protein SORBIDRAFT... 73 2e-011
gi|326514470|dbj|BAJ96222.1| predicted protein [Hordeum vulgare ... 72 4e-011
gi|302815373|ref|XP_002989368.1| hypothetical protein SELMODRAFT... 70 2e-010
gi|302798154|ref|XP_002980837.1| hypothetical protein SELMODRAFT... 70 2e-010
gi|259481609|tpe|CBF75289.1| TPA: hypothetical protein ANIA_1047... 69 4e-010
gi|307107189|gb|EFN55432.1| hypothetical protein CHLNCDRAFT_1337... 68 5e-010
gi|115397949|ref|XP_001214566.1| predicted protein [Aspergillus ... 67 8e-010
>gi|297808085|ref|XP_002871926.1| ribosomal protein L36 family protein
[Arabidopsis lyrata subsp. lyrata]
Length = 103
Score = 181 bits (457), Expect = 7e-044
Identities = 84/103 (81%), Positives = 94/103 (91%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFCKTVKRR RVY+ICSSNPKHKQRQGF S A++G+IP PL SES+A+Q
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYIICSSNPKHKQRQGFSSFAYEGIIPSPLLSESIASQ 60
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQGN 375
E+ R+PGQGVSAGLASLLHKRP P A FGWRSGLAS+LFKQGN
Sbjct: 61 EMTRLPGQGVSAGLASLLHKRPMPTAFFGWRSGLASILFKQGN 103
>gi|15241288|ref|NP_197518.1| Ribosomal protein L36 [Arabidopsis thaliana]
Length = 103
Score = 180 bits (455), Expect = 1e-043
Identities = 84/103 (81%), Positives = 94/103 (91%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFCKTVKRR RVYVICSSNPKHKQRQGF S A++G+ P PLF+E +A+Q
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQGN 375
E+VR+PGQGVSAGLASLLHKRP P A FGWRSGLAS+LFKQGN
Sbjct: 61 ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN 103
>gi|189096154|pdb|3BBO|6 Chain 6, Homology Model For The Spinach Chloroplast 50s
Subunit Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
Length = 104
Score = 175 bits (443), Expect = 3e-042
Identities = 84/104 (80%), Positives = 94/104 (90%), Gaps = 1/104 (0%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQ-GFCSIAHDGVIPPPLFSESVAN 243
MKVRSSVKK+CEFCKTVKRR RVYVICSSNPKHKQRQ GF S A++G+ P PLF+E +A+
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGGFSSFAYEGITPSPLFAEPIAS 60
Query: 244 QEVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQGN 375
QE+VR+PGQGVSAGLASLLHKRP P A FGWRSGLAS+LFKQGN
Sbjct: 61 QELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN 104
>gi|225445521|ref|XP_002285234.1| PREDICTED: hypothetical protein isoform 2
[Vitis vinifera]
Length = 100
Score = 127 bits (317), Expect = 1e-027
Identities = 60/101 (59%), Positives = 80/101 (79%), Gaps = 3/101 (2%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CE+C+TVKRR RVYV+C++NPKHKQRQG + AH+G + PP+ SE A Q
Sbjct: 1 MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAHEGPL-PPMSSEMNAKQ 59
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQ 369
E+ R + GLAS++ K+PEP+ ++GWR+ LAS+LFKQ
Sbjct: 60 EISR--NHRLQGGLASIIPKKPEPSMMYGWRASLASLLFKQ 98
>gi|147794982|emb|CAN71764.1| hypothetical protein VITISV_039227 [Vitis
vinifera]
Length = 100
Score = 124 bits (311), Expect = 6e-027
Identities = 59/101 (58%), Positives = 79/101 (78%), Gaps = 3/101 (2%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CE+C+TVKRR RVYV+C++NPKHKQRQG + AH+G + PP+ SE A Q
Sbjct: 1 MKVRSSVKKMCEYCRTVKRRGRVYVLCTANPKHKQRQGMSTFAHEGPL-PPMSSEMNAKQ 59
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQ 369
E+ + GLAS++ K+PEP+ ++GWR+ LAS+LFKQ
Sbjct: 60 EI--SXNHRLQGGLASIIPKKPEPSMMYGWRASLASLLFKQ 98
>gi|118481183|gb|ABK92543.1| unknown [Populus trichocarpa]
Length = 97
Score = 116 bits (289), Expect = 2e-024
Identities = 58/98 (59%), Positives = 74/98 (75%), Gaps = 6/98 (6%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFC+ VKRR R+YVICSSNPKHKQRQGF + A+ G+I +E+ A
Sbjct: 1 MKVRSSVKKMCEFCQIVKRRGRIYVICSSNPKHKQRQGFATFAYSGLIS----AETTAPP 56
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVL 360
+V P Q + GLASLL K+ EP+ ++GWR+GL+S L
Sbjct: 57 RIV--PSQSMGIGLASLLPKKYEPSTMYGWRAGLSSFL 92
>gi|224144216|ref|XP_002325223.1| predicted protein [Populus trichocarpa]
Length = 132
Score = 116 bits (289), Expect = 2e-024
Identities = 58/98 (59%), Positives = 74/98 (75%), Gaps = 6/98 (6%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFC+ VKRR R+YVICSSNPKHKQRQGF + A+ G+I +E+ A
Sbjct: 36 MKVRSSVKKMCEFCQIVKRRGRIYVICSSNPKHKQRQGFATFAYSGLIS----AETTAPP 91
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVL 360
+V P Q + GLASLL K+ EP+ ++GWR+GL+S L
Sbjct: 92 RIV--PSQSMGIGLASLLPKKYEPSTMYGWRAGLSSFL 127
>gi|224090431|ref|XP_002308985.1| predicted protein [Populus trichocarpa]
Length = 97
Score = 111 bits (277), Expect = 5e-023
Identities = 54/96 (56%), Positives = 74/96 (77%), Gaps = 6/96 (6%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFC+ VKRR R+YVIC+SNPKHKQRQGF ++A+ G+I +E+ A Q
Sbjct: 1 MKVRSSVKKMCEFCQIVKRRGRIYVICNSNPKHKQRQGFSTLAYGGLIS----AETSAPQ 56
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLAS 354
++ P Q GLA+L+ K+ EP+A++GWR+ L+S
Sbjct: 57 GII--PSQSTGVGLATLIPKKHEPSAMYGWRADLSS 90
>gi|255628469|gb|ACU14579.1| unknown [Glycine max]
Length = 99
Score = 96 bits (238), Expect = 2e-018
Identities = 50/98 (51%), Positives = 64/98 (65%), Gaps = 2/98 (2%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFC+ VKRR R+YVICS NPKHKQRQG + A +G P S ++
Sbjct: 1 MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEG--PSRPVSSETSSW 58
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVL 360
++ P Q GL S +R + ++GWR GLAS+L
Sbjct: 59 KMGIKPAQIARPGLISNTPQRHSLSMLYGWRVGLASIL 96
>gi|255629137|gb|ACU14913.1| unknown [Glycine max]
Length = 99
Score = 95 bits (234), Expect = 5e-018
Identities = 48/98 (48%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFC+ VKRR R+YVICS NPKHKQRQG + A +G P S ++
Sbjct: 1 MKVRSSVKKMCEFCQIVKRRGRIYVICSGNPKHKQRQGMATFASEG--PSQPVSSETSSC 58
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVL 360
+++ P Q G +R + ++GWR GLAS+L
Sbjct: 59 KIMIKPAQIARPGRICTSPQRHSLSMLYGWRVGLASIL 96
>gi|116778532|gb|ABK20897.1| unknown [Picea sitchensis]
Length = 78
Score = 85 bits (209), Expect = 4e-015
Identities = 44/78 (56%), Positives = 56/78 (71%), Gaps = 3/78 (3%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKKLCEFC++VKRR +VY++C+SNPKHKQRQG + A+ G + P ES +
Sbjct: 1 MKVRSSVKKLCEFCRSVKRRGKVYILCTSNPKHKQRQGISTFAYQGPLSPTSL-ESNCKK 59
Query: 247 EVVRMPGQGVSAGLASLL 300
E+ GV GLAS+L
Sbjct: 60 EISGAESGGV--GLASIL 75
>gi|168027473|ref|XP_001766254.1| predicted protein [Physcomitrella patens
subsp. patens]
Length = 51
Score = 82 bits (201), Expect = 3e-014
Identities = 33/50 (66%), Positives = 43/50 (86%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPP 216
MKVR++V++LCE+CK VKRR RV+V+C+ NPKHKQRQGFC A+D +PP
Sbjct: 1 MKVRAAVRRLCEYCKVVKRRNRVFVLCTVNPKHKQRQGFCDAAYDAELPP 50
>gi|255567043|ref|XP_002524504.1| 50S ribosomal protein L36, putative [Ricinus
communis]
Length = 84
Score = 75 bits (184), Expect = 3e-012
Identities = 34/45 (75%), Positives = 39/45 (86%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHD 201
MKVRSSVKK+CEFC+ VKRR RVYVIC+SNPKHKQRQG + A +
Sbjct: 4 MKVRSSVKKMCEFCQIVKRRGRVYVICNSNPKHKQRQGMSTFAFE 48
>gi|242032533|ref|XP_002463661.1| hypothetical protein SORBIDRAFT_01g003780
[Sorghum bicolor]
Length = 97
Score = 73 bits (177), Expect = 2e-011
Identities = 44/103 (42%), Positives = 57/103 (55%), Gaps = 16/103 (15%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVI-----PPPLFSE 231
MKVR+SVK+LC FCK VKRR V++ C++NPKHKQRQGF +IA PPP S
Sbjct: 1 MKVRASVKRLCGFCKVVKRRGIVFIHCTANPKHKQRQGFSTIAEAAAACVHLPPPPPASG 60
Query: 232 SVANQEVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVL 360
S + +A + R E + F W GLA++L
Sbjct: 61 SAS-----------AAAFAEASKVARQEMSMKFNWPLGLAALL 92
>gi|326514470|dbj|BAJ96222.1| predicted protein [Hordeum vulgare subsp.
vulgare]
Length = 90
Score = 72 bits (174), Expect = 4e-011
Identities = 36/58 (62%), Positives = 42/58 (72%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVA 240
MKVR+SVK+LC FCK VKRR V++ C+SN KHKQRQGF +IA PPP S S A
Sbjct: 1 MKVRASVKRLCSFCKVVKRRGIVFIHCTSNQKHKQRQGFSTIAACLPPPPPPASASAA 58
>gi|302815373|ref|XP_002989368.1| hypothetical protein SELMODRAFT_129659
[Selaginella moellendorffii]
Length = 71
Score = 70 bits (169), Expect = 2e-010
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIA 195
MKVR+SVKKLC+ C +V+R RR+YVIC SNP+HKQRQG+C+ A
Sbjct: 1 MKVRASVKKLCDACISVRRGRRLYVICKSNPRHKQRQGYCTDA 43
>gi|302798154|ref|XP_002980837.1| hypothetical protein SELMODRAFT_113352
[Selaginella moellendorffii]
Length = 71
Score = 70 bits (169), Expect = 2e-010
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIA 195
MKVR+SVKKLC+ C +V+R RR+YVIC SNP+HKQRQG+C+ A
Sbjct: 1 MKVRASVKKLCDACISVRRGRRLYVICKSNPRHKQRQGYCTDA 43
>gi|259481609|tpe|CBF75289.1| TPA: hypothetical protein ANIA_10477 [Aspergillus
nidulans FGSC A4]
Length = 109
Score = 69 bits (166), Expect = 4e-010
Identities = 32/44 (72%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = +1
Query: 49 ERERGRMKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQG 180
E+ RG MK RSSVK+LCE CK V+R+ RVY+ICS NPKHKQRQG
Sbjct: 66 EQVRG-MKTRSSVKRLCEGCKPVRRKNRVYIICSKNPKHKQRQG 108
>gi|307107189|gb|EFN55432.1| hypothetical protein CHLNCDRAFT_133718 [Chlorella
variabilis]
Length = 84
Score = 68 bits (165), Expect = 5e-010
Identities = 29/39 (74%), Positives = 34/39 (87%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGF 183
MKV++S+KKLCE C+ VKRR R+YVIC NPKHKQRQGF
Sbjct: 1 MKVKASIKKLCEACRIVKRRGRLYVICKDNPKHKQRQGF 39
>gi|115397949|ref|XP_001214566.1| predicted protein [Aspergillus terreus
NIH2624]
Length = 117
Score = 67 bits (163), Expect = 8e-010
Identities = 31/44 (70%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Frame = +1
Query: 49 ERERGRMKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQG 180
E+ RG MK RSSVK+LC+ CK V+R+ RVY+ICS NPKHKQRQG
Sbjct: 74 EQVRG-MKTRSSVKRLCDGCKPVRRKNRVYIICSKNPKHKQRQG 116
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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