BLASTX 7.6.2
Query= UN09978 /QuerySize=539
(538 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G20180.1 | Symbols: | ribosomal protein L36 f... 180 5e-046
TAIR9_protein||AT5G20180.2 | Symbols: | ribosomal protein L36 f... 180 5e-046
TAIR9_protein||ATCG00760.1 | Symbols: RPL36 | encodes a chloropl... 57 8e-009
>TAIR9_protein||AT5G20180.1 | Symbols: | ribosomal protein L36 family protein |
chr5:6811312-6811910 FORWARD
Length = 104
Score = 180 bits (456), Expect = 5e-046
Identities = 84/104 (80%), Positives = 94/104 (90%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFCKTVKRR RVYVICSSNPKHKQRQGF S A++G+ P PLF+E +A+Q
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQGN* 378
E+VR+PGQGVSAGLASLLHKRP P A FGWRSGLAS+LFKQGN*
Sbjct: 61 ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN* 104
>TAIR9_protein||AT5G20180.2 | Symbols: | ribosomal protein L36 family protein |
chr5:6811312-6811910 FORWARD
Length = 104
Score = 180 bits (456), Expect = 5e-046
Identities = 84/104 (80%), Positives = 94/104 (90%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQGFCSIAHDGVIPPPLFSESVANQ 246
MKVRSSVKK+CEFCKTVKRR RVYVICSSNPKHKQRQGF S A++G+ P PLF+E +A+Q
Sbjct: 1 MKVRSSVKKMCEFCKTVKRRGRVYVICSSNPKHKQRQGFSSFAYEGITPSPLFAEPIASQ 60
Query: 247 EVVRMPGQGVSAGLASLLHKRPEPAAVFGWRSGLASVLFKQGN* 378
E+VR+PGQGVSAGLASLLHKRP P A FGWRSGLAS+LFKQGN*
Sbjct: 61 ELVRLPGQGVSAGLASLLHKRPMPTAYFGWRSGLASILFKQGN* 104
>TAIR9_protein||ATCG00760.1 | Symbols: RPL36 | encodes a chloroplast ribosomal
protein L36, a constituent of the large subunit of the ribosomal
complex | chrC:79489-79602 REVERSE
Length = 38
Score = 57 bits (135), Expect = 8e-009
Identities = 24/38 (63%), Positives = 33/38 (86%), Gaps = 1/38 (2%)
Frame = +1
Query: 67 MKVRSSVKKLCEFCKTVKRRRRVYVICSSNPKHKQRQG 180
MK+R+SV+K+CE C+ ++RR R+ VIC SNP+HKQRQG
Sbjct: 1 MKIRASVRKICEKCRLIRRRGRIIVIC-SNPRHKQRQG 37
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,526,529,529
Number of Sequences: 33410
Number of Extensions: 5526529529
Number of Successful Extensions: 205441165
Number of sequences better than 0.0: 0
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