BLASTX 7.6.2
Query= UN09980 /QuerySize=961
(960 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease fami... 445 3e-125
TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease fami... 445 3e-125
TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease fami... 445 3e-125
TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease fami... 445 3e-125
TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease fami... 445 3e-125
TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease fami... 69 4e-012
TAIR9_protein||AT2G07110.1 | Symbols: | FUNCTIONS IN: molecular... 68 7e-012
TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exori... 51 9e-007
TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exori... 51 9e-007
>TAIR9_protein||AT3G46210.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 445 bits (1143), Expect = 3e-125
Identities = 218/234 (93%), Positives = 225/234 (96%), Gaps = 4/234 (1%)
Frame = -1
Query: 888 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKPGTRKNENPEKA 709
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPK GT+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 708 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 529
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 528 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 349
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 348 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 199
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.2 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 445 bits (1143), Expect = 3e-125
Identities = 218/234 (93%), Positives = 225/234 (96%), Gaps = 4/234 (1%)
Frame = -1
Query: 888 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKPGTRKNENPEKA 709
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPK GT+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 708 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 529
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 528 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 349
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 348 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 199
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.3 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 445 bits (1143), Expect = 3e-125
Identities = 218/234 (93%), Positives = 225/234 (96%), Gaps = 4/234 (1%)
Frame = -1
Query: 888 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKPGTRKNENPEKA 709
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPK GT+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 708 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 529
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 528 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 349
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 348 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 199
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.4 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 445 bits (1143), Expect = 3e-125
Identities = 218/234 (93%), Positives = 225/234 (96%), Gaps = 4/234 (1%)
Frame = -1
Query: 888 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKPGTRKNENPEKA 709
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPK GT+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 708 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 529
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 528 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 349
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 348 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 199
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT3G46210.5 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr3:16976960-16978489 REVERSE
Length = 240
Score = 445 bits (1143), Expect = 3e-125
Identities = 218/234 (93%), Positives = 225/234 (96%), Gaps = 4/234 (1%)
Frame = -1
Query: 888 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKPGTRKNENPEKA 709
MEIDREDGR PNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPK GT+KNEN EKA
Sbjct: 1 MEIDREDGRTPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKAGTKKNENAEKA 60
Query: 708 CFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 529
CFEVIWKPKSGQIGK EKEYEMILK+TIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI
Sbjct: 61 CFEVIWKPKSGQIGKVEKEYEMILKRTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAI 120
Query: 528 NAACAALVDAGIPMKHLAVAICCCLADSGYVVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 349
NAACAALVDAGIPMKHLAVAICCCLA++GY+VLDPNKLEEKKMTAFAYLVFPNTTLSVLP
Sbjct: 121 NAACAALVDAGIPMKHLAVAICCCLAENGYLVLDPNKLEEKKMTAFAYLVFPNTTLSVLP 180
Query: 348 E----VEGEPVEHGIITSVTHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQT 199
E EGEPVEHGIITS+THGVMSVDDYFLCVENGRAATASLSAFFRKNFQQ+
Sbjct: 181 EGSSVAEGEPVEHGIITSITHGVMSVDDYFLCVENGRAATASLSAFFRKNFQQS 234
>TAIR9_protein||AT4G27490.1 | Symbols: | 3' exoribonuclease family domain
1-containing protein | chr4:13739961-13741647 FORWARD
Length = 257
Score = 69 bits (167), Expect = 4e-012
Identities = 55/170 (32%), Positives = 77/170 (45%), Gaps = 16/170 (9%)
Frame = -1
Query: 888 MEIDREDGRRPNQLRPLACSRNILHRPHGSASWSQGDTKVLAAVYGPKPGT--------- 736
++ R DGR +Q RP + GSA G+TKV+ +V+GP+
Sbjct: 30 LDWSRPDGRGFHQCRPALLQTGAVSSASGSAYAEFGNTKVIVSVFGPRESKKAMVYSDVG 89
Query: 735 RKNENPEKACFEVIWKPKSGQIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHD 556
R N N F P GQ G KEY +L K ++ + ++ P TT V V+
Sbjct: 90 RLNCNVSYTNFA---SPTLGQ-GTDHKEYSSMLHKALEGVIMMETFPKTTVDVFALVLES 145
Query: 555 DGSLLPCAINAACAALVDAGIPMKHLAVAI-CCCLADSGYVVLDPNKLEE 409
GS L I+ A AL DAGI M L A+ C+ S +++DP EE
Sbjct: 146 GGSDLSVLISCASLALADAGIMMYDLITAVSVSCIGKS--LMIDPVTEEE 193
>TAIR9_protein||AT2G07110.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
3' exoribonuclease family domain 1-containing protein
(TAIR:AT3G46210.5); Has 24 Blast hits to 24 proteins in 7 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:2952610-2953208
REVERSE
Length = 151
Score = 68 bits (165), Expect = 7e-012
Identities = 33/44 (75%), Positives = 38/44 (86%)
Frame = -1
Query: 675 QIGKAEKEYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSL 544
++ K EKEYE ILK+T+QSICVL V PNTTTSVIIQVVHD GS+
Sbjct: 76 RLRKVEKEYETILKRTLQSICVLRVVPNTTTSVIIQVVHDGGSV 119
>TAIR9_protein||AT3G61620.1 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 51 bits (121), Expect = 9e-007
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = -1
Query: 654 EYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 475
E +++++T+++ + + P++ + +QV+ DG INAA AL DAGIPM+ LA
Sbjct: 94 ELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLA 153
Query: 474 VAICCCLADSGYV----VLDPNKLEE 409
V+ +GY+ +LD N +E+
Sbjct: 154 VS-----CSAGYLNSTPLLDLNYVED 174
>TAIR9_protein||AT3G61620.2 | Symbols: RRP41 | RRP41; 3'-5'-exoribonuclease/ RNA
binding | chr3:22801382-22802910 REVERSE
Length = 242
Score = 51 bits (121), Expect = 9e-007
Identities = 28/86 (32%), Positives = 50/86 (58%), Gaps = 9/86 (10%)
Frame = -1
Query: 654 EYEMILKKTIQSICVLTVNPNTTTSVIIQVVHDDGSLLPCAINAACAALVDAGIPMKHLA 475
E +++++T+++ + + P++ + +QV+ DG INAA AL DAGIPM+ LA
Sbjct: 94 ELSLVIRQTMEACILTELMPHSQIDIFLQVLQADGGTRSACINAATLALADAGIPMRDLA 153
Query: 474 VAICCCLADSGYV----VLDPNKLEE 409
V+ +GY+ +LD N +E+
Sbjct: 154 VS-----CSAGYLNSTPLLDLNYVED 174
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,526,529,529
Number of Sequences: 33410
Number of Extensions: 5526529529
Number of Successful Extensions: 205441165
Number of sequences better than 0.0: 0
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