BLASTX 7.6.2
Query= UN09985 /QuerySize=1465
(1464 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT... 593 3e-167
gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabido... 577 2e-162
gi|18416906|ref|NP_567764.1| RNA recognition motif-containing pr... 577 2e-162
gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT... 571 1e-160
gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis ... 542 7e-152
gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsi... 542 1e-151
gi|224115306|ref|XP_002316998.1| predicted protein [Populus tric... 495 8e-138
gi|224124344|ref|XP_002319308.1| predicted protein [Populus tric... 441 2e-121
gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabid... 358 2e-096
gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsi... 355 2e-095
gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT... 355 2e-095
gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata su... 343 7e-092
gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidops... 330 3e-088
gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsi... 329 8e-088
gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabido... 244 3e-062
gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsi... 244 3e-062
gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putativ... 244 4e-062
gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryz... 242 1e-061
gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryz... 242 1e-061
gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protei... 241 4e-061
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848
[Arabidopsis lyrata subsp. lyrata]
Length = 418
Score = 593 bits (1528), Expect = 3e-167
Identities = 308/415 (74%), Positives = 338/415 (81%), Gaps = 20/415 (4%)
Frame = +3
Query: 60 MQQPP--QNPTGAGQ-QIPSDQQAYHQQQLSWMMQ-QQPQQGQQ---WNQQQS-APSQVG 215
MQQPP N + AG QIPSDQQAYHQQQ SWMMQ QQ QQGQ WNQQ + +P Q
Sbjct: 2 MQQPPPASNGSAAGSGQIPSDQQAYHQQQQSWMMQHQQQQQGQPPAGWNQQSAPSPGQPQ 61
Query: 216 QQPY----GSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMG 383
QQ Y GSQNPGS EIRSLWIG L PWM+ENY+M +F+ TG+ SAKVIRNK +G
Sbjct: 62 QQQYGGGGGSQNPGSAGEIRSLWIGDLQPWMEENYLMNIFSLTGDATSAKVIRNKQSGYS 121
Query: 384 EGYGFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGD 563
EGYGFIEF +HA AER+LQ YNGT MP+SDQ FRLNWAQ GA GERRQAEGPE+T+FVGD
Sbjct: 122 EGYGFIEFVNHATAERILQAYNGTTMPSSDQAFRLNWAQLGA-GERRQAEGPEHTVFVGD 180
Query: 564 LAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQY 743
LAP+VTD +LTETF VY+SVKGAKV+ DRTTGRSKGYGFVRFGDESEQ+RAM EMNGQY
Sbjct: 181 LAPDVTDHMLTETFKAVYSSVKGAKVVTDRTTGRSKGYGFVRFGDESEQIRAMTEMNGQY 240
Query: 744 CSSRPMRIGPAANKKPLTMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSA 923
CSSRPMR GPAANKKPLTMQP YQ+ Q GN GESDP+NTTIFVGALD SV +D+L+S
Sbjct: 241 CSSRPMRTGPAANKKPLTMQPASYQNTQ--GNQGESDPTNTTIFVGALDQSVIEDDLKSV 298
Query: 924 FGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNN-QAQ 1100
FGQFGEL+HVKIP GKRCGFVQYA RA AE AL LNGTQLGGQ+IRLSWGRSP+N Q Q
Sbjct: 299 FGQFGELVHVKIPAGKRCGFVQYANRACAEQALSLLNGTQLGGQSIRLSWGRSPSNKQTQ 358
Query: 1101 SHQPQWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYGGGYGGGYGNYQQ 1265
Q Q+ GGGGGGYY GYP PQGYE YG+ AP PQDP+AYYGG GGGYGNYQQ
Sbjct: 359 PDQAQYGGGGGGGYY-GYP--PQGYEAYGY-APPPQDPNAYYGGYAGGGYGNYQQ 409
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 577 bits (1486), Expect = 2e-162
Identities = 308/415 (74%), Positives = 332/415 (80%), Gaps = 23/415 (5%)
Frame = +3
Query: 60 MQQPPQNPTGAGQ---QIPSDQQAYHQQQLSWMMQ-QQPQQGQQ---WNQQQSAPS--QV 212
MQQPP GA QIPSDQQAY QQQ SWMMQ QQ QQGQ WN QQSAPS Q
Sbjct: 2 MQQPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQPPAGWN-QQSAPSSGQP 60
Query: 213 GQQPY---GSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMG 383
QQ Y GSQNPGS EIRSLWIG L PWMDENY+M VF TGE +AKVIRNK G
Sbjct: 61 QQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYS 120
Query: 384 EGYGFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGD 563
EGYGFIEF +HA AER LQTYNG MP+S+Q FRLNWAQ GA GERRQAEGPE+T+FVGD
Sbjct: 121 EGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGA-GERRQAEGPEHTVFVGD 179
Query: 564 LAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQY 743
LAP+VTD +LTETF VY+SVKGAKV+ DRTTGRSKGYGFVRF DESEQ+RAM EMNGQY
Sbjct: 180 LAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQY 239
Query: 744 CSSRPMRIGPAANKKPLTMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSA 923
CSSRPMR GPAANKKPLTMQP YQ+ Q GN GESDP+NTTIFVGA+D SVT+D+L+S
Sbjct: 240 CSSRPMRTGPAANKKPLTMQPASYQNTQ--GNSGESDPTNTTIFVGAVDQSVTEDDLKSV 297
Query: 924 FGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNN-QAQ 1100
FGQFGEL+HVKIP GKRCGFVQYA RA AE AL LNGTQLGGQ+IRLSWGRSP+N Q Q
Sbjct: 298 FGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQ 357
Query: 1101 SHQPQWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYGGGYGGGYGNYQQ 1265
Q Q+ GGGGGYY GYP PQGYE YG+ AP PQDP+AYYGG GGGYGNYQQ
Sbjct: 358 PDQAQY--GGGGGYY-GYP--PQGYEAYGY-APPPQDPNAYYGGYAGGGYGNYQQ 406
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein
[Arabidopsis thaliana]
Length = 415
Score = 577 bits (1486), Expect = 2e-162
Identities = 308/415 (74%), Positives = 332/415 (80%), Gaps = 23/415 (5%)
Frame = +3
Query: 60 MQQPPQNPTGAGQ---QIPSDQQAYHQQQLSWMMQ-QQPQQGQQ---WNQQQSAPS--QV 212
MQQPP GA QIPSDQQAY QQQ SWMMQ QQ QQGQ WN QQSAPS Q
Sbjct: 2 MQQPPPASNGAATGPGQIPSDQQAYLQQQQSWMMQHQQQQQGQPPAGWN-QQSAPSSGQP 60
Query: 213 GQQPY---GSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMG 383
QQ Y GSQNPGS EIRSLWIG L PWMDENY+M VF TGE +AKVIRNK G
Sbjct: 61 QQQQYGGGGSQNPGSAGEIRSLWIGDLQPWMDENYLMNVFGLTGEATAAKVIRNKQNGYS 120
Query: 384 EGYGFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGD 563
EGYGFIEF +HA AER LQTYNG MP+S+Q FRLNWAQ GA GERRQAEGPE+T+FVGD
Sbjct: 121 EGYGFIEFVNHATAERNLQTYNGAPMPSSEQAFRLNWAQLGA-GERRQAEGPEHTVFVGD 179
Query: 564 LAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQY 743
LAP+VTD +LTETF VY+SVKGAKV+ DRTTGRSKGYGFVRF DESEQ+RAM EMNGQY
Sbjct: 180 LAPDVTDHMLTETFKAVYSSVKGAKVVNDRTTGRSKGYGFVRFADESEQIRAMTEMNGQY 239
Query: 744 CSSRPMRIGPAANKKPLTMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSA 923
CSSRPMR GPAANKKPLTMQP YQ+ Q GN GESDP+NTTIFVGA+D SVT+D+L+S
Sbjct: 240 CSSRPMRTGPAANKKPLTMQPASYQNTQ--GNSGESDPTNTTIFVGAVDQSVTEDDLKSV 297
Query: 924 FGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNN-QAQ 1100
FGQFGEL+HVKIP GKRCGFVQYA RA AE AL LNGTQLGGQ+IRLSWGRSP+N Q Q
Sbjct: 298 FGQFGELVHVKIPAGKRCGFVQYANRACAEQALSVLNGTQLGGQSIRLSWGRSPSNKQTQ 357
Query: 1101 SHQPQWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYGGGYGGGYGNYQQ 1265
Q Q+ GGGGGYY GYP PQGYE YG+ AP PQDP+AYYGG GGGYGNYQQ
Sbjct: 358 PDQAQY--GGGGGYY-GYP--PQGYEAYGY-APPPQDPNAYYGGYAGGGYGNYQQ 406
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572
[Arabidopsis lyrata subsp. lyrata]
Length = 398
Score = 571 bits (1471), Expect = 1e-160
Identities = 297/404 (73%), Positives = 328/404 (81%), Gaps = 22/404 (5%)
Frame = +3
Query: 72 PQNPTGAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQ--VGQQPY--GSQN 239
P N GAG QIPS QQQL MMQQQ QQ QQ QQQ S +GQQ Y GSQN
Sbjct: 5 PSNAAGAG-QIPSG-----QQQLWIMMQQQQQQQQQQQQQQQRQSAALLGQQQYGVGSQN 58
Query: 240 PGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHA 419
PGS E++SLWIG L WMDENYIM+VF Q+GE QSAKVIRNKLTG EGYGFIEF +H+
Sbjct: 59 PGS--EVKSLWIGDLQQWMDENYIMSVFNQSGEAQSAKVIRNKLTGQSEGYGFIEFINHS 116
Query: 420 AAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTE 599
AERVLQTYNG QMP+++QTFRLNWAQAGAG +R Q EGP++TIFVGDLAPEVTD++L++
Sbjct: 117 VAERVLQTYNGAQMPSTEQTFRLNWAQAGAGEKRHQTEGPDHTIFVGDLAPEVTDYMLSD 176
Query: 600 TFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAA 779
TF NVY SVKGAKV++DRTTGRSKGYGFVRF DE+EQMRAM EMNGQYCS+RPMRIGPAA
Sbjct: 177 TFKNVYGSVKGAKVVVDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAA 236
Query: 780 NKKPLTMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKI 959
NK L MQP MYQ+ Q GGN G+SDP+NTTIFVG LDA+VTDDEL+S FGQFGEL+HVKI
Sbjct: 237 NKNALPMQPAMYQNTQ-GGNAGDSDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKI 295
Query: 960 PPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQAQSHQPQWNGGGGGG 1139
PPGKRCGFVQYA RA+AEHAL LNGTQLGGQ+IRLSWGRSPN Q Q QWNGGG
Sbjct: 296 PPGKRCGFVQYANRATAEHALSVLNGTQLGGQSIRLSWGRSPNKQPD--QAQWNGGG--- 350
Query: 1140 YYGGYPPQPQ-GYEPYGHGAPRPQDPSAYYGGGYGGGYGNYQQQ 1268
Y GYPPQPQ GYEPYG+ A QDP+AYYGG GYGNYQQQ
Sbjct: 351 -YYGYPPQPQGGYEPYGYAAQPNQDPNAYYGG--YTGYGNYQQQ 391
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 542 bits (1395), Expect = 7e-152
Identities = 281/391 (71%), Positives = 314/391 (80%), Gaps = 20/391 (5%)
Frame = +3
Query: 87 GAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQNPGSDNEIRS 266
GAG QIPS QQ WMM QQ QQ QQ Q +AP Q GSQNPGS ++++S
Sbjct: 10 GAG-QIPSGQQHL------WMMMQQQQQQQQM-QLSAAPLGQHQYGIGSQNPGSASDVKS 61
Query: 267 LWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAERVLQTY 446
LWIG L WMDENYIM+VFAQ+GE SAKVIRNKLTG EGYGFIEF SH+ AERVLQTY
Sbjct: 62 LWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTY 121
Query: 447 NGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSNVYASV 626
NG MP+++QTFRLNWAQAGAG +R Q EGP++TIFVGDLAPEVTD++L++TF NVY SV
Sbjct: 122 NGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSV 181
Query: 627 KGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANKKPLTMQP 806
KGAKV++DRTTGRSKGYGFVRF DE+EQMRAM EMNGQYCS+RPMRIGPAANK L MQP
Sbjct: 182 KGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQP 241
Query: 807 GMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIPPGKRCGFV 986
MYQ+ Q G N G++DP+NTTIFVG LDA+VTDDEL+S FGQFGEL+HVKIPPGKRCGFV
Sbjct: 242 AMYQNTQ-GANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFV 300
Query: 987 QYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQAQSHQPQWNGGGGGGYYGGYPPQP 1166
QYA +ASAEHAL LNGTQLGGQ+IRLSWGRSPN QS Q QWNGGG Y GYPPQP
Sbjct: 301 QYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNK--QSDQAQWNGGG----YYGYPPQP 354
Query: 1167 QGYEPYGHGA-PRPQDPSAYYGGGYGGGYGN 1256
QG YG+ A P QDP+AYYGG GYGN
Sbjct: 355 QG--GYGYAAQPPTQDPNAYYGG--YTGYGN 381
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 542 bits (1394), Expect = 1e-151
Identities = 280/388 (72%), Positives = 313/388 (80%), Gaps = 20/388 (5%)
Frame = +3
Query: 87 GAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQNPGSDNEIRS 266
GAG QIPS QQ WMM QQ QQ QQ Q +AP Q GSQNPGS ++++S
Sbjct: 10 GAG-QIPSGQQHL------WMMMQQQQQQQQM-QLSAAPLGQHQYGIGSQNPGSASDVKS 61
Query: 267 LWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAERVLQTY 446
LWIG L WMDENYIM+VFAQ+GE SAKVIRNKLTG EGYGFIEF SH+ AERVLQTY
Sbjct: 62 LWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTY 121
Query: 447 NGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSNVYASV 626
NG MP+++QTFRLNWAQAGAG +R Q EGP++TIFVGDLAPEVTD++L++TF NVY SV
Sbjct: 122 NGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSV 181
Query: 627 KGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANKKPLTMQP 806
KGAKV++DRTTGRSKGYGFVRF DE+EQMRAM EMNGQYCS+RPMRIGPAANK L MQP
Sbjct: 182 KGAKVVLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQP 241
Query: 807 GMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIPPGKRCGFV 986
MYQ+ Q G N G++DP+NTTIFVG LDA+VTDDEL+S FGQFGEL+HVKIPPGKRCGFV
Sbjct: 242 AMYQNTQ-GANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFV 300
Query: 987 QYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQAQSHQPQWNGGGGGGYYGGYPPQP 1166
QYA +ASAEHAL LNGTQLGGQ+IRLSWGRSPN QS Q QWNGGG Y GYPPQP
Sbjct: 301 QYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNK--QSDQAQWNGGG----YYGYPPQP 354
Query: 1167 QGYEPYGHGA-PRPQDPSAYYGG--GYG 1241
QG YG+ A P QDP+AYYGG GYG
Sbjct: 355 QG--GYGYAAQPPTQDPNAYYGGYTGYG 380
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 495 bits (1274), Expect = 8e-138
Identities = 264/416 (63%), Positives = 300/416 (72%), Gaps = 28/416 (6%)
Frame = +3
Query: 60 MQQPPQNPTGAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQ------WNQQQSAPSQVGQQ 221
MQQP G G P QQ Y QQQ WMMQQQ QQ Q WN P Q
Sbjct: 1 MQQP--GVAGVGAPQPDQQQQYQQQQQQWMMQQQ-QQSQPVPPPAGWNPPPVPPPT--QY 55
Query: 222 PYGSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFI 401
+ + G +EI+SLWIG L WMDENY++++F+ TGE+ AKVIRNK TG EGYGFI
Sbjct: 56 GAAAGSGGDGDEIKSLWIGDLQQWMDENYLLSIFSATGEIVQAKVIRNKQTGYPEGYGFI 115
Query: 402 EFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVT 581
EF S AAAER+LQTYNGT MPNS+Q FRLNWA GA GERRQ +GP++T+FVGDLA +V
Sbjct: 116 EFVSRAAAERILQTYNGTPMPNSEQAFRLNWATLGA-GERRQDDGPDFTVFVGDLAADVN 174
Query: 582 DFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPM 761
D++L ETF NVY SVKGAKV+ DR TGRSKGYGF+RF DE+EQ RAM EMNGQYCS+RPM
Sbjct: 175 DYLLQETFRNVYPSVKGAKVVTDRVTGRSKGYGFIRFADENEQRRAMVEMNGQYCSTRPM 234
Query: 762 RIGPAANKKPLTM--QPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAFGQF 935
RIGPAA KKPLT Q YQ+ Q GN GE+DP+NTTIFVGALD SVTDD LR+ F ++
Sbjct: 235 RIGPAATKKPLTQQYQKATYQNPQ--GNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKY 292
Query: 936 GELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNN-QAQSHQP 1112
GEL+HVKIP GKRCGFVQ+A R SAE AL LNGTQ+ GQNIRLSWGRSP+N Q Q Q
Sbjct: 293 GELVHVKIPAGKRCGFVQFANRTSAEQALSMLNGTQIAGQNIRLSWGRSPSNKQVQPDQS 352
Query: 1113 QWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYGG--GYGGGY--GNYQQQ 1268
QWN GGGYYG PQGY+ YG+ A PQDP+ YYGG GYG G YQQQ
Sbjct: 353 QWN---GGGYYG----YPQGYDAYGYAAAAPQDPNMYYGGYPGYGNYQQPGAYQQQ 401
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 441 bits (1133), Expect = 2e-121
Identities = 231/344 (67%), Positives = 259/344 (75%), Gaps = 17/344 (4%)
Frame = +3
Query: 87 GAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQ------WNQQQSAPSQVGQQPYGSQNPGS 248
GAG P QQ Y QQ WMMQQQ QQ Q W P GS G
Sbjct: 9 GAGVPQPDQQQQYQQQ---WMMQQQ-QQSQPVPPPAGWTPPPVPPPSQYGSAAGSAAVG- 63
Query: 249 DNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAE 428
+EI+SLWIG L WMDENYI+++F+ TGEV AKVIRNK TG EGYGFIEF SHAAAE
Sbjct: 64 -DEIKSLWIGDLQQWMDENYILSIFSTTGEVVQAKVIRNKQTGYPEGYGFIEFVSHAAAE 122
Query: 429 RVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFS 608
R+LQTYNGT MPNS+QTFRLNWA GA GERRQ +GP+YT+F+GDLA +V D++L ETF
Sbjct: 123 RILQTYNGTPMPNSEQTFRLNWATLGA-GERRQDDGPDYTVFIGDLAADVNDYLLQETFR 181
Query: 609 NVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANKK 788
NVY+SVKGAKV+ DR TGRSKGYGFVRF DE+EQMRAM EMNGQYCS+RPMRIGPAA KK
Sbjct: 182 NVYSSVKGAKVVTDRVTGRSKGYGFVRFADENEQMRAMVEMNGQYCSTRPMRIGPAATKK 241
Query: 789 PLTM--QPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIP 962
PLT Q YQ Q GN GESDP+NTTIFVGALD SVTDD LR+ F ++GEL+HVKIP
Sbjct: 242 PLTQQYQKAAYQSPQ--GNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIP 299
Query: 963 PGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQ 1094
GKRCGFVQ+A R AE AL LNGTQ+ GQNIRLSWGRSP+N+
Sbjct: 300 AGKRCGFVQFANRTCAEQALSMLNGTQIAGQNIRLSWGRSPSNK 343
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata
subsp. lyrata]
Length = 435
Score = 358 bits (918), Expect = 2e-096
Identities = 199/411 (48%), Positives = 248/411 (60%), Gaps = 31/411 (7%)
Frame = +3
Query: 63 QQPPQNP---TGAGQQIPSDQQAYHQQQLSWMMQQQ-------PQQGQQWNQQQSAPSQV 212
QQPPQ A Q P+ QQQ M Q P Q Q Q
Sbjct: 32 QQPPQQQQQWMAAAMQYPAAAMMMMQQQQMMMYPHQYVPYNQGPYQHHHPQLHQYGSYQQ 91
Query: 213 GQQPYGSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGY 392
QQ + + GS +++++LW+G LL WMDE Y+ + F+ TGEV S KVIRNKLT EGY
Sbjct: 92 HQQQHKPLDRGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGY 151
Query: 393 GFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAP 572
GFIEF S AAAE VLQ Y+G+ MPNSDQ FR+NWA G +R GP+ +IFVGDL+P
Sbjct: 152 GFIEFLSRAAAEEVLQNYSGSLMPNSDQPFRINWASFSTGEKRAVENGPDLSIFVGDLSP 211
Query: 573 EVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSS 752
+VTD +L ETF + Y SVK AKV++D TGRSKGYGFVRFGDE+E+ RA+ EMNG YCS+
Sbjct: 212 DVTDALLHETFFDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSN 271
Query: 753 RPMRIGPAANKKPLTMQ----------PGMYQDN--QGGGNPGESDPSNTTIFVGALDAS 896
R MR+G A K+ + Q G + N G+ + + +N TIFVG +DA
Sbjct: 272 RQMRVGVATPKRAIANQQQHSSQALILAGGHGANGSMAHGSQSDGESTNATIFVGGIDAD 331
Query: 897 VTDDELRSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWG 1076
VTD++LR F QFGE++ VKIP GK CGFVQ+A R SAE A+ LNGT +G +RLSWG
Sbjct: 332 VTDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNGTVIGKNTVRLSWG 391
Query: 1077 RSPNNQAQSHQPQWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYG 1229
RSPN QW G G + GGY + QGY G G D + Y+G
Sbjct: 392 RSPNK-------QWRGDSGQQWNGGY-SRGQGYN-NGGGYANHHDSNNYHG 433
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 355 bits (909), Expect = 2e-095
Identities = 199/394 (50%), Positives = 245/394 (62%), Gaps = 35/394 (8%)
Frame = +3
Query: 66 QPPQNPTGAGQQIPSDQQAYHQQQLSWM-------------MQQQPQ-QGQQWNQQQSAP 203
Q Q A QQ P+ A QQQ M QQ PQ Q + QQQ
Sbjct: 43 QQQQQWMAAMQQYPAAAMAMMQQQQMMMYPHPQYAPYNQAAYQQHPQFQYAAYQQQQQQH 102
Query: 204 SQVGQQPYGSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMG 383
Q QQP G G D ++++LW+G LL WMDE Y+ T F+ T EV S KVIRNK T
Sbjct: 103 HQSQQQPRGGS--GGD-DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQS 159
Query: 384 EGYGFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGD 563
EGYGF+EF S +AAE LQ+++G MPN++Q FRLNWA G +R GP+ +IFVGD
Sbjct: 160 EGYGFVEFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGD 219
Query: 564 LAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQY 743
LAP+V+D VL ETF+ Y SVKGAKV++D TGRSKGYGFVRFGDE+E+ RAM EMNG +
Sbjct: 220 LAPDVSDAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAF 279
Query: 744 CSSRPMRIGPAANKK-----------PLTMQPGMYQDNQGGGNPGESDPSNTTIFVGALD 890
CSSR MR+G A K+ LT+ G + G G+ + + +N+TIFVG LD
Sbjct: 280 CSSRQMRVGIATPKRAAAYGQQNGSQALTLAGG----HGGNGSMSDGESNNSTIFVGGLD 335
Query: 891 ASVTDDELRSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLS 1070
A VT+++L F FGE++ VKIP GK CGFVQ+A R SAE A+ NLNGT +G +RLS
Sbjct: 336 ADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLS 395
Query: 1071 WGRSPNNQAQSHQ-PQWNGG--GGGGYYGGYPPQ 1163
WGRSPN Q +S QWNGG G GY GY Q
Sbjct: 396 WGRSPNKQWRSDSGNQWNGGYSRGQGYNNGYANQ 429
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095
[Arabidopsis lyrata subsp. lyrata]
Length = 450
Score = 355 bits (909), Expect = 2e-095
Identities = 196/379 (51%), Positives = 241/379 (63%), Gaps = 20/379 (5%)
Frame = +3
Query: 60 MQQPPQNPTGAGQQIPSDQQAYHQQ-QLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQ 236
MQQ Q P +Q AY Q Q + Q QQ +QQQ QQP G
Sbjct: 65 MQQQQMMMYPHHQYAPYNQAAYQQHPQFQYAAAYQQQQQHHQSQQQK------QQPRGGS 118
Query: 237 NPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASH 416
G D ++++LW+G LL WMDE Y+ T F+ T EV S KVIRNK T EGYGF+EF S
Sbjct: 119 --GGD-DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFVEFLSR 175
Query: 417 AAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLT 596
+AAE LQ+++G MPN++Q FRLNWA G +R GP+ +IFVGDLAP+V+D VL
Sbjct: 176 SAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVSDAVLL 235
Query: 597 ETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPA 776
ETF+ Y SVKGAKV++D TGRSKGYGFVRFGDE+E+ RAM EMNG +CSSR MR+G A
Sbjct: 236 ETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQMRVGIA 295
Query: 777 ANKKPLT--MQPGMYQDNQGGGNPG-----ESDPSNTTIFVGALDASVTDDELRSAFGQF 935
K+ Q G GG+ G + + +N+TIFVG LDA VT+++L F QF
Sbjct: 296 TPKRAAAYGQQNGSQALTLAGGHGGNGSLSDGESNNSTIFVGGLDADVTEEDLMQPFSQF 355
Query: 936 GELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQAQSHQ-P 1112
GE++ VKIP GK CGFVQ+A R SAE A+ NLNGT +G +RLSWGRSPN Q +S
Sbjct: 356 GEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGTVIGKNTVRLSWGRSPNKQWRSDTGN 415
Query: 1113 QWNGG--GGGGYYGGYPPQ 1163
QWNGG G GY GY Q
Sbjct: 416 QWNGGYSRGQGYNNGYANQ 434
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 343 bits (878), Expect = 7e-092
Identities = 186/344 (54%), Positives = 228/344 (66%), Gaps = 17/344 (4%)
Frame = +3
Query: 246 SDNEIRSLWIGALLPWMDENYIMTVFAQT-GEVQ--SAKVIRNKLTGMGEGYGFIEFASH 416
S+ E +++W+G L WMDE Y+ + FA GE+Q S KVIRNK G+ EGYGF+EF SH
Sbjct: 103 SNGENKTIWVGDLHHWMDETYLNSSFASADGEIQIVSVKVIRNKHNGLSEGYGFVEFDSH 162
Query: 417 AAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLT 596
A++VLQ +NGT MP+++Q FRLNWA G +R + GP+ +IFVGDLAP+V+D +L
Sbjct: 163 DVADKVLQEFNGTTMPDTEQPFRLNWASFSTGEKRLENNGPDLSIFVGDLAPDVSDTLLH 222
Query: 597 ETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPA 776
ETFS Y SVK AKV++D TGRSKGYGFVRFGDE+E+ +AM EMNG CSSR MRIGPA
Sbjct: 223 ETFSEKYPSVKAAKVVIDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIGPA 282
Query: 777 ANKKPL-TMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAFGQFGELIHV 953
+K Q G Y N P E D NTTIFVG LD+SVTDD+LR F +FGE++ V
Sbjct: 283 TPRKTTGYQQQGGYMPNGALTRP-EGDTLNTTIFVGGLDSSVTDDDLRQPFSEFGEIVSV 341
Query: 954 KIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQ--AQSHQPQWNGG 1127
KIP GK CGFVQ+ R SAE AL LNGT +G Q +RLSWGR+ N+ + QW
Sbjct: 342 KIPVGKGCGFVQFVNRPSAEEALEKLNGTVIGKQTVRLSWGRNQANKQPRDKYGNQW--- 398
Query: 1128 GGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYGGGYGGGYGNY 1259
YYGG Q Y YG+ P+P DP Y YGGGY Y
Sbjct: 399 -VAPYYGG-----QYYNGYGYMVPQP-DPRMYPATPYGGGYRMY 435
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 330 bits (846), Expect = 3e-088
Identities = 181/351 (51%), Positives = 229/351 (65%), Gaps = 19/351 (5%)
Frame = +3
Query: 219 QPYGSQNPGSDN-EIRSLWIGALLPWMDENYIMTVF--AQTGEVQSAKVIRNKLTGMGEG 389
Q G+++ + N E +++W+G L WMDE Y+ + F A+ E+ S KVIRNK G EG
Sbjct: 88 QSRGNKHQNAFNGENKTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEG 147
Query: 390 YGFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLA 569
YGF+EF SH A++VLQ +NG MPN+DQ FRLNWA G +R + GP+ +IFVGDLA
Sbjct: 148 YGFVEFESHDVADKVLQEFNGAPMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLA 207
Query: 570 PEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCS 749
P+V+D +L ETFS Y SVK AKV++D TGRSKGYGFVRFGDE+E+ +AM EMNG CS
Sbjct: 208 PDVSDALLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCS 267
Query: 750 SRPMRIGPAANKKPL-TMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAF 926
SR MRIGPA +K Q G Y + G E D NTTIFVG LD+SVTD++L+ F
Sbjct: 268 SRAMRIGPATPRKTNGYQQQGGYMPS-GAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPF 326
Query: 927 GQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQ--AQ 1100
+FGE++ VKIP GK CGFVQ+ R +AE AL LNGT +G Q +RLSWGR+P N+
Sbjct: 327 SEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRD 386
Query: 1101 SHQPQWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQD---PSAYYGGGYGG 1244
+ QW YYGG Q Y YG+ P+P P+A Y YGG
Sbjct: 387 KYGNQW----VDPYYGG-----QFYNGYGYMVPQPDPRMYPAAPYYPMYGG 428
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 329 bits (843), Expect = 8e-088
Identities = 181/351 (51%), Positives = 229/351 (65%), Gaps = 17/351 (4%)
Frame = +3
Query: 219 QPYGSQNPGSDN-EIRSLWIGALLPWMDENYIMTVFA--QTGEVQSAKVIRNKLTGMGEG 389
Q G+++ + N E +++W+G L WMDE Y+ + FA E+ S KVIRNK G+ EG
Sbjct: 86 QSRGNKHQNAFNGENKTIWVGDLHHWMDEAYLNSSFASGDEREIVSVKVIRNKNNGLSEG 145
Query: 390 YGFIEFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLA 569
YGF+EF SH A++VL+ +NGT MPN+DQ FRLNWA G +R + GP+ +IFVGDL+
Sbjct: 146 YGFVEFESHDVADKVLREFNGTTMPNTDQPFRLNWASFSTGEKRLENNGPDLSIFVGDLS 205
Query: 570 PEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCS 749
P+V+D +L ETFS Y SVK AKV++D TGRSKGYGFVRFGDE+E+ +AM EMNG CS
Sbjct: 206 PDVSDNLLHETFSEKYPSVKAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCS 265
Query: 750 SRPMRIGPAANKKPL-TMQPGMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELRSAF 926
SR MRIGPA +K Q G Y N P E D NTTIFVG LD+SVTD++L+ F
Sbjct: 266 SRAMRIGPATPRKTNGYQQQGGYMPNGTLTRP-EGDIMNTTIFVGGLDSSVTDEDLKQPF 324
Query: 927 GQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQ--AQ 1100
+FGE++ VKIP GK CGFVQ+ R +AE AL LNGT +G Q +RLSWGR+P N+
Sbjct: 325 NEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGRNPANKQPRD 384
Query: 1101 SHQPQWNGGGGGGYYGGYPPQPQGYEPYGHGAPRPQDPSAYYGGGYGGGYG 1253
+ QW YYGG Q Y YG+ P+P DP Y Y YG
Sbjct: 385 KYGNQW----VDPYYGG-----QFYNGYGYMVPQP-DPRMYPAAPYYPMYG 425
>gi|9294614|dbj|BAB02953.1| DNA/RNA binding protein-like [Arabidopsis thaliana]
Length = 489
Score = 244 bits (622), Expect = 3e-062
Identities = 125/248 (50%), Positives = 161/248 (64%), Gaps = 3/248 (1%)
Frame = +3
Query: 60 MQQPPQNPTGAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQN 239
MQ P P A + Q + Q Q QQ Q + Q Q + + +
Sbjct: 44 MQYP---PAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAID 100
Query: 240 PGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHA 419
GS +++++LW+G LL WMDE Y+ + F+ TGEV S KVIRNKLT EGYGF+EF S A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 420 AAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTE 599
AAE VLQ Y+G+ MPNSDQ FR+NWA G +R GP+ ++FVGDL+P+VTD +L E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 600 TFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAA 779
TFS+ Y SVK AKV++D TGRSKGYGFVRFGDE+E+ RA+ EMNG YCS+R MR+G A
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 780 NKKPLTMQ 803
K+ + Q
Sbjct: 281 PKRAIANQ 288
>gi|15230291|ref|NP_188544.1| RNA-binding protein 47B [Arabidopsis thaliana]
Length = 435
Score = 244 bits (622), Expect = 3e-062
Identities = 125/248 (50%), Positives = 161/248 (64%), Gaps = 3/248 (1%)
Frame = +3
Query: 60 MQQPPQNPTGAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQN 239
MQ P P A + Q + Q Q QQ Q + Q Q + + +
Sbjct: 44 MQYP---PAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQHKAID 100
Query: 240 PGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHA 419
GS +++++LW+G LL WMDE Y+ + F+ TGEV S KVIRNKLT EGYGF+EF S A
Sbjct: 101 RGSGDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRA 160
Query: 420 AAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTE 599
AAE VLQ Y+G+ MPNSDQ FR+NWA G +R GP+ ++FVGDL+P+VTD +L E
Sbjct: 161 AAEEVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHE 220
Query: 600 TFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAA 779
TFS+ Y SVK AKV++D TGRSKGYGFVRFGDE+E+ RA+ EMNG YCS+R MR+G A
Sbjct: 221 TFSDRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIAT 280
Query: 780 NKKPLTMQ 803
K+ + Q
Sbjct: 281 PKRAIANQ 288
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis
thaliana]
Length = 392
Score = 244 bits (621), Expect = 4e-062
Identities = 125/245 (51%), Positives = 162/245 (66%), Gaps = 3/245 (1%)
Frame = +3
Query: 75 QNPTGAGQQIPSDQQ--AYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQNPGS 248
Q P A + QQ Y Q + + Q Q +Q S QQ + + + GS
Sbjct: 2 QYPPAAAMMMMQQQQMLMYPHQYVPYNQGPYQQHHPQLHQYGSYQQHQHQQ-HKAIDRGS 60
Query: 249 DNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAE 428
+++++LW+G LL WMDE Y+ + F+ TGEV S KVIRNKLT EGYGF+EF S AAAE
Sbjct: 61 GDDVKTLWVGDLLHWMDETYLHSCFSHTGEVSSVKVIRNKLTSQSEGYGFVEFLSRAAAE 120
Query: 429 RVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFS 608
VLQ Y+G+ MPNSDQ FR+NWA G +R GP+ ++FVGDL+P+VTD +L ETFS
Sbjct: 121 EVLQNYSGSVMPNSDQPFRINWASFSTGEKRAVENGPDLSVFVGDLSPDVTDVLLHETFS 180
Query: 609 NVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANKK 788
+ Y SVK AKV++D TGRSKGYGFVRFGDE+E+ RA+ EMNG YCS+R MR+G A K+
Sbjct: 181 DRYPSVKSAKVVIDSNTGRSKGYGFVRFGDENERSRALTEMNGAYCSNRQMRVGIATPKR 240
Query: 789 PLTMQ 803
+ Q
Sbjct: 241 AIANQ 245
>gi|125558527|gb|EAZ04063.1| hypothetical protein OsI_26200 [Oryza sativa Indica
Group]
Length = 323
Score = 242 bits (617), Expect = 1e-061
Identities = 136/248 (54%), Positives = 155/248 (62%), Gaps = 4/248 (1%)
Frame = +3
Query: 69 PPQNPTGAGQQ--IPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQNP 242
PPQ P Q P Q A Q + QQ Q Q G Q G P
Sbjct: 63 PPQQPPAMWGQPPPPPPQYAPPPPQQFQLPHQQYAPPPQHYAPPPPQQQYGAQMAGGPAP 122
Query: 243 GSDNEIRSLWIGALLPWMDENYIMTVFAQTG-EVQSAKVIRNKLTGMGEGYGFIEFASHA 419
G D EIRSLWIG L WMDE+Y+ FA G +V S KVIRNK +G EGYGFIEF SHA
Sbjct: 123 GGD-EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHA 181
Query: 420 AAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTE 599
AAE L +NG M N DQ F+LNWA +GAG R +GPE+TIFVGDLA +VTD +L E
Sbjct: 182 AAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEE 241
Query: 600 TFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAA 779
F Y SV+GAKV+ D+ TGRSKGYGFVRFGDE+EQ RAM EMNG S+R MR+GPAA
Sbjct: 242 AFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAA 301
Query: 780 NKKPLTMQ 803
NKK + Q
Sbjct: 302 NKKNMGTQ 309
>gi|125600441|gb|EAZ40017.1| hypothetical protein OsJ_24455 [Oryza sativa
Japonica Group]
Length = 323
Score = 242 bits (617), Expect = 1e-061
Identities = 136/248 (54%), Positives = 155/248 (62%), Gaps = 4/248 (1%)
Frame = +3
Query: 69 PPQNPTGAGQQ--IPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQPYGSQNP 242
PPQ P Q P Q A Q + QQ Q Q G Q G P
Sbjct: 63 PPQQPPAMWGQPPPPPPQYAPPPPQQFQLPHQQYAPPPQHYAPPPPQQQYGAQMAGGPAP 122
Query: 243 GSDNEIRSLWIGALLPWMDENYIMTVFAQTG-EVQSAKVIRNKLTGMGEGYGFIEFASHA 419
G D EIRSLWIG L WMDE+Y+ FA G +V S KVIRNK +G EGYGFIEF SHA
Sbjct: 123 GGD-EIRSLWIGDLQYWMDESYLSNAFAPMGQQVTSVKVIRNKQSGHSEGYGFIEFQSHA 181
Query: 420 AAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTE 599
AAE L +NG M N DQ F+LNWA +GAG R +GPE+TIFVGDLA +VTD +L E
Sbjct: 182 AAEYALANFNGRMMLNVDQLFKLNWASSGAGERRAADDGPEHTIFVGDLASDVTDSMLEE 241
Query: 600 TFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAA 779
F Y SV+GAKV+ D+ TGRSKGYGFVRFGDE+EQ RAM EMNG S+R MR+GPAA
Sbjct: 242 AFKTSYPSVRGAKVVFDKVTGRSKGYGFVRFGDENEQTRAMTEMNGATLSTRQMRLGPAA 301
Query: 780 NKKPLTMQ 803
NKK + Q
Sbjct: 302 NKKNMGTQ 309
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis
thaliana]
Length = 468
Score = 241 bits (613), Expect = 4e-061
Identities = 132/249 (53%), Positives = 161/249 (64%), Gaps = 12/249 (4%)
Frame = +3
Query: 60 MQQPPQNPTGAGQQ-----IPSDQQAYHQQQLSWMMQQQPQ-QGQQWNQQQSAPSQVGQQ 221
MQQ P QQ P Q A + Q QQ PQ Q + QQQ Q QQ
Sbjct: 52 MQQYPAAAMAMMQQQQMMMYPHPQYAPYNQA---AYQQHPQFQYAAYQQQQQQHHQSQQQ 108
Query: 222 PYGSQNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFI 401
P G G D ++++LW+G LL WMDE Y+ T F+ T EV S KVIRNK T EGYGF+
Sbjct: 109 PRGGS--GGD-DVKTLWVGDLLHWMDETYLHTCFSHTNEVSSVKVIRNKQTCQSEGYGFV 165
Query: 402 EFASHAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVT 581
EF S +AAE LQ+++G MPN++Q FRLNWA G +R GP+ +IFVGDLAP+V+
Sbjct: 166 EFLSRSAAEEALQSFSGVTMPNAEQPFRLNWASFSTGEKRASENGPDLSIFVGDLAPDVS 225
Query: 582 DFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPM 761
D VL ETF+ Y SVKGAKV++D TGRSKGYGFVRFGDE+E+ RAM EMNG +CSSR M
Sbjct: 226 DAVLLETFAGRYPSVKGAKVVIDSNTGRSKGYGFVRFGDENERSRAMTEMNGAFCSSRQM 285
Query: 762 RIGPAANKK 788
R+G A K+
Sbjct: 286 RVGIATPKR 294
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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