BLASTX 7.6.2
Query= UN09985 /QuerySize=1465
(1464 letters)
Database: UniProt/SwissProt;
518,415 sequences; 182,829,261 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.0... 246 5e-064
sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator ... 146 7e-034
sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN... 100 3e-020
sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=... 95 1e-018
sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 OS=Homo sapie... 90 3e-017
sp|Q8QZY9|SF3B4_MOUSE Splicing factor 3B subunit 4 OS=Mus muscul... 90 3e-017
sp|Q6AYL5|SF3B4_RAT Splicing factor 3B subunit 4 OS=Rattus norve... 90 3e-017
sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=r... 80 4e-014
sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropical... 79 6e-014
sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RB... 78 2e-013
sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=... 78 2e-013
sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=... 78 2e-013
sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus ... 78 2e-013
sp|Q09442|SF3B4_CAEEL Splicing factor 3B subunit 4 OS=Caenorhabd... 77 2e-013
sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis G... 76 5e-013
sp|Q7ZXB5|RBM22_XENLA Pre-mRNA-splicing factor RBM22 OS=Xenopus ... 69 6e-011
sp|Q6NZZ9|RBM22_DANRE Pre-mRNA-splicing factor RBM22 OS=Danio re... 68 1e-010
>sp|O60176|YG41_SCHPO Uncharacterized RNA-binding protein C23E6.01c
OS=Schizosaccharomyces pombe GN=SPBC23E6.01c PE=1 SV=2
Length = 473
Score = 246 bits (626), Expect = 5e-064
Identities = 152/403 (37%), Positives = 211/403 (52%), Gaps = 27/403 (6%)
Frame = +3
Query: 66 QPPQNPTGAGQQIPSDQQAYHQQQLSWMMQQQPQQGQQWNQQQSAPSQVGQQP----YGS 233
Q P N + ++Q + + +P Q Q A ++ G YGS
Sbjct: 24 QQPANTDTLVKDNSFNEQDDQEVDNDYKSNDEPVQSQDPISPNMASNESGNSENTSNYGS 83
Query: 234 QNPGSDNEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFAS 413
+ + +LW+G L PW+ E +I V+ G+ K+IRN+ TGM GY F+EFAS
Sbjct: 84 SRDENVYQKTTLWMGELEPWVTEAFIQQVWNTLGKAVKVKLIRNRYTGMNAGYCFVEFAS 143
Query: 414 HAAAERVLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVL 593
A + + N +P ++ F+LNWA G E+ ++ EY+IFVGDL+P V +F +
Sbjct: 144 PHEASSAM-SMNNKPIPGTNHLFKLNWASGGGLREKSISKASEYSIFVGDLSPNVNEFDV 202
Query: 594 TETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGP 773
F++ Y S K AK+M D T S+GYGFVRF DE++Q A+ EM GQ C RP+R+G
Sbjct: 203 YSLFASRYNSCKSAKIMTDPQTNVSRGYGFVRFTDENDQKSALAEMQGQICGDRPIRVGL 262
Query: 774 AANKK-----------PLTMQP-GMYQDNQGGGNPGESDPSNTTIFVGALDASVTDDELR 917
A K P++M P G Y Q P +D +N+T+FVG L V+++EL+
Sbjct: 263 ATPKSKAHVFSPVNVVPVSMPPVGFYSAAQ--PVPQFADTANSTVFVGGLSKFVSEEELK 320
Query: 918 SAFGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQA 1097
F FGE+++VKIPPGK CGFVQ+ R SAE A+ L G LG IRLSWGR+ N A
Sbjct: 321 YLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQGYPLGNSRIRLSWGRNQNPIA 380
Query: 1098 ------QSHQPQWNGGGGGGYYG-GYPPQPQGYEPYGHGAPRP 1205
QS Q + PPQ Q + PY AP P
Sbjct: 381 APALNYQSQVSQTTIPATSLFPAMSLPPQAQ-FSPYPAVAPSP 422
>sp|O13759|CSX1_SCHPO RNA-binding post-transcriptional regulator csx1
OS=Schizosaccharomyces pombe GN=csx1 PE=1 SV=1
Length = 632
Score = 146 bits (366), Expect = 7e-034
Identities = 76/177 (42%), Positives = 103/177 (58%), Gaps = 3/177 (1%)
Frame = +3
Query: 264 SLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGE--GYGFIEFASHAAAERVL 437
+LW+G L PWMD +I ++A E + KV+R+K + Y F++F+S AAAER L
Sbjct: 86 TLWMGDLEPWMDATFIQQLWASLNEPVNVKVMRSKASSSETLISYCFVQFSSSAAAERAL 145
Query: 438 QTYNGTQMPNSDQTFRLNWAQAGAGGERR-QAEGPEYTIFVGDLAPEVTDFVLTETFSNV 614
YN T +P + TF+LNWA G + PE++IFVGDL P D L TF ++
Sbjct: 146 MKYNNTMIPGAHCTFKLNWATGGGIQHNNFVSRDPEFSIFVGDLLPTTEDSDLFMTFRSI 205
Query: 615 YASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANK 785
Y S AK+++D TG S+ YGFVRF E EQ A+ M G C RP+RI A+ K
Sbjct: 206 YPSCTSAKIIVDPVTGLSRKYGFVRFSSEKEQQHALMHMQGYLCQGRPLRISVASPK 262
Score = 81 bits (198), Expect = 2e-014
Identities = 34/77 (44%), Positives = 56/77 (72%)
Frame = +3
Query: 852 DPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNL 1031
DP NTT+FVG L +++++ +L+ F FG ++++KIP GK CGFVQY+ +++AE A+ +
Sbjct: 293 DPLNTTVFVGGLASNLSEKDLQVCFQPFGRILNIKIPFGKGCGFVQYSEKSAAEKAINTM 352
Query: 1032 NGTQLGGQNIRLSWGRS 1082
G +G +IRL+WG +
Sbjct: 353 QGALVGTSHIRLAWGHN 369
>sp|Q00539|NAM8_YEAST Protein NAM8 OS=Saccharomyces cerevisiae GN=NAM8 PE=1
SV=2
Length = 523
Score = 100 bits (248), Expect = 3e-020
Identities = 55/140 (39%), Positives = 79/140 (56%), Gaps = 6/140 (4%)
Frame = +3
Query: 384 EGYGFIEFASHAAAERVLQTYNGTQMPN-SDQTFRLNWAQAGAGGERRQ----AEGPEYT 548
+GY F++F S A L NG +PN ++ +LNWA + G +
Sbjct: 106 QGYCFVDFPSSTHAANAL-LKNGMLIPNFPNKKLKLNWATSSYSNSNNSLNNVKSGNNCS 164
Query: 549 IFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGE 728
IFVGDLAP VT+ L E F N YAS AK++ D+ TG SKGYGFV+F + EQ A+ E
Sbjct: 165 IFVGDLAPNVTESQLFELFINRYASTSHAKIVHDQVTGMSKGYGFVKFTNSDEQQLALSE 224
Query: 729 MNGQYCSSRPMRIGPAANKK 788
M G + + R +++GP + ++
Sbjct: 225 MQGVFLNGRAIKVGPTSGQQ 244
Score = 96 bits (237), Expect = 6e-019
Identities = 44/87 (50%), Positives = 58/87 (66%)
Frame = +3
Query: 849 SDPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHALLN 1028
+DP+NTT+F+G L + VT+DELR+ F FG +++VKIP GK CGFVQY R SAE A+
Sbjct: 308 TDPNNTTVFIGGLSSLVTEDELRAYFQPFGTIVYVKIPVGKCCGFVQYVDRLSAEAAIAG 367
Query: 1029 LNGTQLGGQNIRLSWGRSPNNQAQSHQ 1109
+ G + +RLSWGRS A Q
Sbjct: 368 MQGFPIANSRVRLSWGRSAKQTALLQQ 394
>sp|P32831|NGR1_YEAST Negative growth regulatory protein NGR1 OS=Saccharomyces
cerevisiae GN=NGR1 PE=1 SV=2
Length = 672
Score = 95 bits (235), Expect = 1e-018
Identities = 52/129 (40%), Positives = 74/129 (57%), Gaps = 1/129 (0%)
Frame = +3
Query: 441 TYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSNVYA 620
T N P +TFRLNWA +GA + PE+++FVGDL+P T+ L F +
Sbjct: 159 TTNSQTNPTFKRTFRLNWA-SGATLQSSIPSTPEFSLFVGDLSPTATEADLLSLFQTRFK 217
Query: 621 SVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANKKPLTM 800
SVK +VM D TG S+ +GFVRFGDE E+ RA+ EM+G++ R +R+ A + + +
Sbjct: 218 SVKTVRVMTDPLTGSSRCFGFVRFGDEDERRRALIEMSGKWFQGRALRVAYATPRNNMML 277
Query: 801 QPGMYQDNQ 827
Q Q Q
Sbjct: 278 QLQEQQQQQ 286
Score = 88 bits (217), Expect = 1e-016
Identities = 46/124 (37%), Positives = 72/124 (58%), Gaps = 4/124 (3%)
Frame = +3
Query: 747 SSRPMRIGPAANKKPLTMQPG----MYQDNQGGGNPGESDPSNTTIFVGALDASVTDDEL 914
+S + + N P+ + G M ++ N +DP+NTT+FVG L T+ +L
Sbjct: 317 NSNMLPLNALHNAPPMHLNEGGISNMRVNDSLPSNTYNTDPTNTTVFVGGLVPKTTEFQL 376
Query: 915 RSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHALLNLNGTQLGGQNIRLSWGRSPNNQ 1094
RS F FG +++V+IP GK CGFV++ R AE ++ L G +GG IRLSWGR ++
Sbjct: 377 RSLFKPFGPILNVRIPNGKNCGFVKFEKRIDAEASIQGLQGFIVGGSPIRLSWGRPSSSN 436
Query: 1095 AQSH 1106
A+++
Sbjct: 437 AKTN 440
>sp|Q15427|SF3B4_HUMAN Splicing factor 3B subunit 4 OS=Homo sapiens GN=SF3B4
PE=1 SV=1
Length = 424
Score = 90 bits (222), Expect = 3e-017
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Frame = +3
Query: 252 NEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAER 431
N+ ++++G L + E + +F Q G V + + ++++TG +GYGF+EF S A+
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 432 VLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSN 611
++ N ++ + R+N A A + IF+G+L PE+ + +L +TFS
Sbjct: 70 AIKIMNMIKL--YGKPIRVNKASA-----HNKNLDVGANIFIGNLDPEIDEKLLYDTFSA 122
Query: 612 VYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANK 785
++ K+M D TG SKGY F+ F A+ MNGQY +RP+ + A K
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 180
>sp|Q8QZY9|SF3B4_MOUSE Splicing factor 3B subunit 4 OS=Mus musculus GN=Sf3b4
PE=2 SV=1
Length = 424
Score = 90 bits (222), Expect = 3e-017
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Frame = +3
Query: 252 NEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAER 431
N+ ++++G L + E + +F Q G V + + ++++TG +GYGF+EF S A+
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 432 VLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSN 611
++ N ++ + R+N A A + IF+G+L PE+ + +L +TFS
Sbjct: 70 AIKIMNMIKL--YGKPIRVNKASA-----HNKNLDVGANIFIGNLDPEIDEKLLYDTFSA 122
Query: 612 VYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANK 785
++ K+M D TG SKGY F+ F A+ MNGQY +RP+ + A K
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 180
>sp|Q6AYL5|SF3B4_RAT Splicing factor 3B subunit 4 OS=Rattus norvegicus GN=Sf3b4
PE=2 SV=1
Length = 424
Score = 90 bits (222), Expect = 3e-017
Identities = 54/178 (30%), Positives = 92/178 (51%), Gaps = 7/178 (3%)
Frame = +3
Query: 252 NEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAER 431
N+ ++++G L + E + +F Q G V + + ++++TG +GYGF+EF S A+
Sbjct: 10 NQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADY 69
Query: 432 VLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSN 611
++ N ++ + R+N A A + IF+G+L PE+ + +L +TFS
Sbjct: 70 AIKIMNMIKL--YGKPIRVNKASA-----HNKNLDVGANIFIGNLDPEIDEKLLYDTFSA 122
Query: 612 VYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPAANK 785
++ K+M D TG SKGY F+ F A+ MNGQY +RP+ + A K
Sbjct: 123 FGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK 180
>sp|Q6DRG1|RBM42_DANRE RNA-binding protein 42 OS=Danio rerio GN=rbm42 PE=2 SV=2
Length = 402
Score = 80 bits (195), Expect = 4e-014
Identities = 41/85 (48%), Positives = 56/85 (65%), Gaps = 1/85 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
E ++ IF GDL EV D +L FS Y S AKV+ D+ TG++KGYGFV F D ++
Sbjct: 299 ETDDFRIFCGDLGNEVNDDILARAFSR-YPSFLKAKVVRDKRTGKTKGYGFVSFKDPNDY 357
Query: 711 MRAMGEMNGQYCSSRPMRIGPAANK 785
+RAM EMNG+Y SRP+++ +A K
Sbjct: 358 VRAMREMNGRYVGSRPIKLRKSAWK 382
>sp|Q66KL9|RBM42_XENTR RNA-binding protein 42 OS=Xenopus tropicalis GN=rbm42
PE=2 SV=1
Length = 392
Score = 79 bits (194), Expect = 6e-014
Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
E ++ IF GDL EV D +L FS Y S AKV+ D+ TG++KGYGFV F D ++
Sbjct: 289 ESDDFRIFCGDLGNEVNDDILARAFSR-YPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDY 347
Query: 711 MRAMGEMNGQYCSSRPMRI 767
+RAM EMNG+Y SRP+++
Sbjct: 348 VRAMREMNGKYVGSRPIKL 366
>sp|Q0P5L0|RBM42_BOVIN RNA-binding protein 42 OS=Bos taurus GN=RBM42 PE=2 SV=1
Length = 448
Score = 78 bits (190), Expect = 2e-013
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
+ ++ IF GDL EV D +L FS + S AKV+ D+ TG++KGYGFV F D S+
Sbjct: 345 DADDFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDY 403
Query: 711 MRAMGEMNGQYCSSRPMRI 767
+RAM EMNG+Y SRP+++
Sbjct: 404 VRAMREMNGKYVGSRPIKL 422
>sp|Q9BTD8|RBM42_HUMAN RNA-binding protein 42 OS=Homo sapiens GN=RBM42 PE=1
SV=1
Length = 480
Score = 78 bits (190), Expect = 2e-013
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
+ ++ IF GDL EV D +L FS + S AKV+ D+ TG++KGYGFV F D S+
Sbjct: 377 DADDFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDY 435
Query: 711 MRAMGEMNGQYCSSRPMRI 767
+RAM EMNG+Y SRP+++
Sbjct: 436 VRAMREMNGKYVGSRPIKL 454
>sp|Q91V81|RBM42_MOUSE RNA-binding protein 42 OS=Mus musculus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 78 bits (190), Expect = 2e-013
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
+ ++ IF GDL EV D +L FS + S AKV+ D+ TG++KGYGFV F D S+
Sbjct: 371 DADDFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDY 429
Query: 711 MRAMGEMNGQYCSSRPMRI 767
+RAM EMNG+Y SRP+++
Sbjct: 430 VRAMREMNGKYVGSRPIKL 448
>sp|Q6AXT7|RBM42_RAT RNA-binding protein 42 OS=Rattus norvegicus GN=Rbm42 PE=1
SV=1
Length = 474
Score = 78 bits (190), Expect = 2e-013
Identities = 38/79 (48%), Positives = 53/79 (67%), Gaps = 1/79 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
+ ++ IF GDL EV D +L FS + S AKV+ D+ TG++KGYGFV F D S+
Sbjct: 371 DADDFRIFCGDLGNEVNDDILARAFSR-FPSFLKAKVIRDKRTGKTKGYGFVSFKDPSDY 429
Query: 711 MRAMGEMNGQYCSSRPMRI 767
+RAM EMNG+Y SRP+++
Sbjct: 430 VRAMREMNGKYVGSRPIKL 448
>sp|Q09442|SF3B4_CAEEL Splicing factor 3B subunit 4 OS=Caenorhabditis elegans
GN=sap-49 PE=1 SV=2
Length = 388
Score = 77 bits (189), Expect = 2e-013
Identities = 49/175 (28%), Positives = 90/175 (51%), Gaps = 7/175 (4%)
Frame = +3
Query: 252 NEIRSLWIGALLPWMDENYIMTVFAQTGEVQSAKVIRNKLTGMGEGYGFIEFASHAAAER 431
N+ ++++G L + E+ + + Q G V S + ++++T +G+GF+EF A+
Sbjct: 10 NQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADY 69
Query: 432 VLQTYNGTQMPNSDQTFRLNWAQAGAGGERRQAEGPEYTIFVGDLAPEVTDFVLTETFSN 611
++ N ++ + ++N A A E+ G IFVG+L PEV + +L +TFS
Sbjct: 70 AIKILNMIKL--YGKPIKVNKASA---HEKNMDVGA--NIFVGNLDPEVDEKLLYDTFSA 122
Query: 612 VYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQMRAMGEMNGQYCSSRPMRIGPA 776
++ K+M D +G SKG+ F+ F A+ MNGQ+ +R + + A
Sbjct: 123 FGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALEAMNGQFLCNRAITVSYA 177
>sp|A2VDB3|RBM42_XENLA RNA-binding protein 42 OS=Xenopus laevis GN=rbm42 PE=2
SV=1
Length = 392
Score = 76 bits (186), Expect = 5e-013
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 1/79 (1%)
Frame = +3
Query: 531 EGPEYTIFVGDLAPEVTDFVLTETFSNVYASVKGAKVMMDRTTGRSKGYGFVRFGDESEQ 710
E ++ IF GDL EV D +L FS Y S AKV+ D+ TG++KGYGFV F D ++
Sbjct: 289 EPDDFRIFCGDLGNEVNDDILARAFSR-YPSFLRAKVIRDKRTGKTKGYGFVSFKDPNDY 347
Query: 711 MRAMGEMNGQYCSSRPMRI 767
+RA EMNG+Y SRP+++
Sbjct: 348 VRATREMNGKYVGSRPIKL 366
>sp|Q7ZXB5|RBM22_XENLA Pre-mRNA-splicing factor RBM22 OS=Xenopus laevis GN=rbm22
PE=2 SV=1
Length = 417
Score = 69 bits (168), Expect = 6e-011
Identities = 42/130 (32%), Positives = 67/130 (51%), Gaps = 7/130 (5%)
Frame = +3
Query: 852 DPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHAL-LN 1028
D S TT++VG L ++++ ELR+ F QFGE+ + + ++C F+Q+ATR SAE A +
Sbjct: 228 DKSITTLYVGGLGDTISESELRNHFYQFGEIRTITVVQRQQCAFIQFATRQSAETAAEKS 287
Query: 1029 LNGTQLGGQNIRLSWGRSPNNQAQSHQPQWNGGGG------GGYYGGYPPQPQGYEPYGH 1190
N + G+ + + WGRS + + + +G G G G PP P E +
Sbjct: 288 FNKLIVNGRRLNVKWGRSQAARGKEREHDGSGDPGMKFEPVPGLPGALPPPPTEEESSAN 347
Query: 1191 GAPRPQDPSA 1220
P + SA
Sbjct: 348 YFNLPPNGSA 357
>sp|Q6NZZ9|RBM22_DANRE Pre-mRNA-splicing factor RBM22 OS=Danio rerio GN=rbm22
PE=2 SV=1
Length = 425
Score = 68 bits (165), Expect = 1e-010
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 10/128 (7%)
Frame = +3
Query: 852 DPSNTTIFVGALDASVTDDELRSAFGQFGELIHVKIPPGKRCGFVQYATRASAEHAL-LN 1028
D S TT+++G L +VTD ELR+ F QFGE+ + I ++C F+Q+ATR +AE A +
Sbjct: 228 DKSITTLYIGGLGENVTDSELRNHFYQFGEIRTITIVQRQQCAFIQFATRQAAETAAEKS 287
Query: 1029 LNGTQLGGQNIRLSWGRSPNNQAQSHQPQWNGGG-----GGGYYGGYPPQPQGYEP---- 1181
N + G+ + + WGRS + + + G G G PP P E
Sbjct: 288 FNKLIINGRRLNVKWGRSQAARGKGEKDGVTESGIRLEPVPGLPGALPPPPVSDEDASTN 347
Query: 1182 YGHGAPRP 1205
Y + AP P
Sbjct: 348 YFNLAPTP 355
Database: UniProt/SwissProt
Posted date: Sat Aug 07 14:36:18 2010
Number of letters in database: 182,829,261
Number of sequences in database: 518,415
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,366,676,449
Number of Sequences: 518415
Number of Extensions: 41366676449
Number of Successful Extensions: 294470065
Number of sequences better than 0.0: 0
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