BLASTX 7.6.2
Query= UN09990 /QuerySize=962
(961 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|297810651|ref|XP_002873209.1| predicted protein [Arabidopsis ... 65 1e-008
gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis ... 65 2e-008
gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis ... 64 4e-008
gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs... 62 1e-007
>gi|297810651|ref|XP_002873209.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 170
Score = 65 bits (157), Expect = 1e-008
Identities = 45/107 (42%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Frame = -3
Query: 929 EGLELNGSDAAIRKSSRRISRISVEGYDTSSPREDVEEALRKHFASREIKLIHASAPQVD 750
+GL+ G + I K S RI V GYDT P +DV AL+ HF SR + S P
Sbjct: 8 KGLKRKGRERIIPKFS-DAGRIIVTGYDTGLPLDDVATALKNHF-SRCGMITDVSIPLDS 65
Query: 749 DDRLTILCRYALIY-LNEEDEEKALKLDGSDMGGRILRVAVYPFDSN 612
IL R IY + E +KAL+L+GSDMGGR + V YP+D +
Sbjct: 66 AKNYKILQRCGYIYFVGEGAVDKALQLNGSDMGGRNVSVEAYPYDED 112
>gi|297851804|ref|XP_002893783.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 276
Score = 65 bits (156), Expect = 2e-008
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 5/135 (3%)
Frame = -3
Query: 872 SRISVEGYDTSSPREDVEEALRKHFASREIKLIHASAPQVDDDRLTILCRYALIYL-NEE 696
SRI VEGYDTS D++ ALRKHF+S ++ H P+ D IL +A I++ E
Sbjct: 59 SRICVEGYDTSLHEYDLKLALRKHFSSCG-EITHIYVPR--DFERNILKSFAFIHIAGEG 115
Query: 695 DEEKALKLDGSDMGGRILRVAVYPFDSNHLEHFFAPTKA-QDKYRRRLLYVAGFDPFLTK 519
EEKAL L GSD GG + P+D +++ A ++ + +R + V G+D L +
Sbjct: 116 AEEKALALSGSDAGGWNVFAKSSPYDGQYVDPGRATAESPRFSLPQRKMIVTGYDTSLPE 175
Query: 518 DDTNVMVRRLFPGSG 474
D + + F G
Sbjct: 176 IDIQIRLSNHFSSCG 190
>gi|297810419|ref|XP_002873093.1| predicted protein [Arabidopsis lyrata subsp.
lyrata]
Length = 161
Score = 64 bits (153), Expect = 4e-008
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Frame = -3
Query: 956 MDESVIKGVEGLELNGSDAAIRKSSRRISRISVEGYDTSSPREDVEEALRKHFASREIKL 777
M+ES IKG++ LE N S A + S + ISVEGY+T+ + AL KHFAS K+
Sbjct: 1 MEESAIKGLKLLEFNDSGADSQTHSSTSTAISVEGYNTTLKEYPLRLALAKHFASCG-KI 59
Query: 776 IHASAPQVDDDRLTILCRYALIYLNEED-EEKALKLDGSDMGG 651
P+ D + +L R + +++ +D EEKAL+L G+D+GG
Sbjct: 60 TQIYVPR--DFKKKLLKRASFVWIEGDDAEEKALQLSGTDVGG 100
>gi|145334285|ref|NP_001078524.1| RNA-binding (RRM/RBD/RNP motifs) family
protein [Arabidopsis thaliana]
Length = 226
Score = 62 bits (149), Expect = 1e-007
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = -3
Query: 956 MDESVIKGVEGLELNGSDAAIRKSSRRISRISVEGYDTSSPREDVEEALRKHFASREIKL 777
MDES IKG++ L+LN A RK ++ISVEGYDT V+ L KHFAS K+
Sbjct: 1 MDESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCG-KI 59
Query: 776 IHASAPQVDDDRLTILCRYALIYLNEEDEEKALKLDGSDMGG 651
H P+ D +R + + E EEKAL L G+D GG
Sbjct: 60 THIYVPR-DFERGILKSVAFMCIKGEGGEEKALLLSGTDAGG 100
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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