BLASTX 7.6.2
Query= UN09990 /QuerySize=962
(961 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / ... 64 1e-010
TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding | ch... 62 5e-010
TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (... 56 3e-008
>TAIR9_protein||AT5G03480.1 | Symbols: | nucleic acid binding / nucleotide
binding | chr5:869208-870855 REVERSE
Length = 322
Score = 64 bits (155), Expect = 1e-010
Identities = 61/177 (34%), Positives = 87/177 (49%), Gaps = 13/177 (7%)
Frame = -3
Query: 875 ISRISVEGYDTSSPREDVEEALRKHFAS-REIKLIHASAPQVDDDRLTILCRYALIYLNE 699
I+ ISVEGYDTS + +E L KHF S EI+ H P D +R + L E
Sbjct: 112 ITTISVEGYDTSLQKYLLELILEKHFDSCGEIR--HVYVP-TDYERGVLKSVAFLRIEGE 168
Query: 698 EDEEKALKLDGSDMGGRILRVAVYPFDSNHLEHFFAPTKAQDKYRRRLLYVAGFDPFLTK 519
E+KAL+L G+D+ G V V P + + AP + + V G+D L +
Sbjct: 169 GAEDKALQLSGTDVVG--WTVIVKPSEIFYDNSSRAPATTPEASKIHRFRVTGYDASLPE 226
Query: 518 DDTNVMVRRLFPGSGCAVLGEGRV-----FVKLGGQDAIDKALQLSGDPVGGFTIVV 363
D + + + F S C + + V FV L G+ +DKAL+LSG +G T+VV
Sbjct: 227 IDIQMALCKHF--SSCGEIWQVTVLSSTAFVSLRGERCVDKALELSGCNMGERTLVV 281
>TAIR9_protein||AT5G03495.1 | Symbols: | nucleotide binding |
chr5:873804-875025 REVERSE
Length = 227
Score = 62 bits (149), Expect = 5e-010
Identities = 44/102 (43%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Frame = -3
Query: 956 MDESVIKGVEGLELNGSDAAIRKSSRRISRISVEGYDTSSPREDVEEALRKHFASREIKL 777
MDES IKG++ L+LN A RK ++ISVEGYDT V+ L KHFAS K+
Sbjct: 1 MDESAIKGMKLLQLNEIGANSRKPRIPWTKISVEGYDTRLREYTVKLVLEKHFASCG-KI 59
Query: 776 IHASAPQVDDDRLTILCRYALIYLNEEDEEKALKLDGSDMGG 651
H P+ D +R + + E EEKAL L G+D GG
Sbjct: 60 THIYVPR-DFERGILKSVAFMCIKGEGGEEKALLLSGTDAGG 100
>TAIR9_protein||AT3G09160.1 | Symbols: | RNA recognition motif (RRM)-containing
protein | chr3:2805779-2806912 REVERSE
Length = 199
Score = 56 bits (133), Expect = 3e-008
Identities = 44/105 (41%), Positives = 58/105 (55%), Gaps = 10/105 (9%)
Frame = -3
Query: 929 EGLELNGSDAAIRKSSRRISRISVEGYDTSSPREDVEEALRKHFA-SREIKLIHASAPQV 753
+GLE+ S IR S I RISV GYD PRE VE L+K F+ EI +H +
Sbjct: 7 KGLEVKRS-RKIRDSD--IERISVTGYDIELPREHVESELKKLFSPCGEITDVH-----I 58
Query: 752 DDDRLTILCRYALIY-LNEEDEEKALKLDGSDMGGRILRVAVYPF 621
+ R + L +A IY + E +KAL+L+GSDMGG + PF
Sbjct: 59 PETRNSSLWSHAFIYFVGEGTADKALQLNGSDMGGWTVDAEADPF 103
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,526,529,529
Number of Sequences: 33410
Number of Extensions: 5526529529
Number of Successful Extensions: 205441165
Number of sequences better than 0.0: 0
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