Library    |     Search    |     Batch query    |     SNP    |     SSR  

GenBank blast output of UN09999


BLASTX 7.6.2

Query= UN09999 /QuerySize=667
        (666 letters)

Database: GenBank nr;
          15,229,318 sequences; 5,219,829,378 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

gi|297845452|ref|XP_002890607.1| hypothetical protein ARALYDRAFT...    108   1e-021
gi|297845456|ref|XP_002890609.1| hypothetical protein ARALYDRAFT...     94   1e-017
gi|334182810|ref|NP_001185077.1| uncharacterized protein [Arabid...     80   2e-013
gi|145324008|ref|NP_001077593.1| uncharacterized protein [Arabid...     60   2e-007
gi|116830739|gb|ABK28327.1| unknown [Arabidopsis thaliana]              60   2e-007
gi|334182812|ref|NP_001185078.1| uncharacterized protein [Arabid...     59   7e-007
gi|116830111|gb|ABK28013.1| unknown [Arabidopsis thaliana]              59   7e-007

>gi|297845452|ref|XP_002890607.1| hypothetical protein ARALYDRAFT_889961
        [Arabidopsis lyrata subsp. lyrata]

          Length = 129

 Score =  108 bits (268), Expect = 1e-021
 Identities = 64/133 (48%), Positives = 83/133 (62%), Gaps = 11/133 (8%)
 Frame = -1

Query: 621 MLSSIVSSVLFLLLLVLLLHMDHAFGAQTEIRKLKETIN-ARNLEGDNQRSSKMWFPPSR 445
           M+SS  +S+LFLLLL+   HM  A GAQTEIRK+KETI   RNLEG++ ++SKMW   S 
Sbjct:   1 MVSSTFTSMLFLLLLLFSFHMGEALGAQTEIRKIKETIRMRRNLEGNDYKNSKMWMRRSY 60

Query: 444 SMHCGGGKAFQNMATTY-RTNHGHLPGGYLSSLCQP--CFSYFSNCYHFTCTTTVYCQSI 274
           S  C   + F+NM TT    +HG      L   C P  CF+ +      +CT T YC ++
Sbjct:  61 SPQCQQYERFKNMVTTNGDDDHG------LDDPCFPFTCFNGWGPGSQ-SCTYTKYCHAV 113

Query: 273 YGSPPRCTRSENC 235
           YG+PPRC+ SENC
Sbjct: 114 YGAPPRCSISENC 126

>gi|297845456|ref|XP_002890609.1| hypothetical protein ARALYDRAFT_889963
        [Arabidopsis lyrata subsp. lyrata]

          Length = 142

 Score =  94 bits (233), Expect = 1e-017
 Identities = 63/134 (47%), Positives = 74/134 (55%), Gaps = 25/134 (18%)
 Frame = -1

Query: 621 MLSSIVSSVLFLLLLVLLLHMDHAFGAQTEIRKL----------KETINAR-NLEGDNQR 475
           +LSS VS +LF LLLVL +HM+ A GAQ EIRKL          +ET+  R NLEG+   
Sbjct:   3 LLSSTVSFMLFFLLLVLSIHMNEALGAQIEIRKLGYKLQRSSNAEETMVMRWNLEGNGFV 62

Query: 474 SSKMWFPPSRSMHCGGGKAFQNMATTYR--TNHGHLPGGYLSSLCQPCFSYFSNCYHFTC 301
           +SK+  PPS S HCGGGK F+NMAT  R       LPGG  SSLC              C
Sbjct:  63 TSKIDAPPSASRHCGGGKRFENMATIDRHDDQFSPLPGGDSSSLC------------IRC 110

Query: 300 TTTVYCQSIYGSPP 259
            TT  C    G+PP
Sbjct: 111 VTTQRCVGAVGAPP 124

>gi|334182810|ref|NP_001185077.1| uncharacterized protein [Arabidopsis
        thaliana]

          Length = 115

 Score =  80 bits (196), Expect = 2e-013
 Identities = 44/80 (55%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
 Frame = -1

Query: 567 LHMDHAFGAQTEIRKLKET-INARNLEGDNQRSSKMWFPPSRSMHCGGGKAFQNMATTYR 391
           +HM+ A GAQ EIRKL+ET +  RN +G+   +SK+  PPS S HCGGGK F+NMATT R
Sbjct:   4 IHMNEALGAQIEIRKLEETMVMRRNKKGNGFVTSKIDVPPSASQHCGGGKRFKNMATTNR 63

Query: 390 --TNHGHLPGGYLSSLCQPC 337
                  LPGG  SSLC  C
Sbjct:  64 HDDQFSPLPGGVSSSLCIRC 83

>gi|145324008|ref|NP_001077593.1| uncharacterized protein [Arabidopsis
        thaliana]

          Length = 127

 Score =  60 bits (145), Expect = 2e-007
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 621 MLSSIVSSVLFLLLLVLLLHMDHAFGAQTEIRKLKETIN-ARNLEGD-NQRSSKMWFPPS 448
           M SS   S+LFLL+LV  LH+D A GAQT+IRKLKE I   RNLEG+ + RSSK     S
Sbjct:   1 MASSTFYSMLFLLVLVFSLHVDEALGAQTKIRKLKEMITMRRNLEGNIDYRSSKRRTGGS 60

Query: 447 RSMHCGGGKAFQNMATTY 394
            S  C   K++  + TTY
Sbjct:  61 VSNQC-RSKSYIEIVTTY 77

>gi|116830739|gb|ABK28327.1| unknown [Arabidopsis thaliana]

          Length = 128

 Score =  60 bits (145), Expect = 2e-007
 Identities = 41/78 (52%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = -1

Query: 621 MLSSIVSSVLFLLLLVLLLHMDHAFGAQTEIRKLKETIN-ARNLEGD-NQRSSKMWFPPS 448
           M SS   S+LFLL+LV  LH+D A GAQT+IRKLKE I   RNLEG+ + RSSK     S
Sbjct:   1 MASSTFYSMLFLLVLVFSLHVDEALGAQTKIRKLKEMITMRRNLEGNIDYRSSKRRTGGS 60

Query: 447 RSMHCGGGKAFQNMATTY 394
            S  C   K++  + TTY
Sbjct:  61 VSNQC-RSKSYIEIVTTY 77

>gi|334182812|ref|NP_001185078.1| uncharacterized protein [Arabidopsis
        thaliana]

          Length = 93

 Score =  59 bits (140), Expect = 7e-007
 Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = -1

Query: 501 RNLEGDNQRSSKMWFPPSRSMHCGGGKAFQNMATTYR--TNHGHLPGGYLSSLCQPC 337
           RN +G+   +SK+  PPS S HCGGGK F+NMATT R       LPGG  SSLC  C
Sbjct:   5 RNKKGNGFVTSKIDVPPSASQHCGGGKRFKNMATTNRHDDQFSPLPGGVSSSLCIRC 61

>gi|116830111|gb|ABK28013.1| unknown [Arabidopsis thaliana]

          Length = 94

 Score =  59 bits (140), Expect = 7e-007
 Identities = 31/57 (54%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
 Frame = -1

Query: 501 RNLEGDNQRSSKMWFPPSRSMHCGGGKAFQNMATTYR--TNHGHLPGGYLSSLCQPC 337
           RN +G+   +SK+  PPS S HCGGGK F+NMATT R       LPGG  SSLC  C
Sbjct:   5 RNKKGNGFVTSKIDVPPSASQHCGGGKRFKNMATTNRHDDQFSPLPGGVSSSLCIRC 61

  Database: GenBank nr
    Posted date:  Thu Sep 08 23:06:31 2011
  Number of letters in database: 5,219,829,378
  Number of sequences in database:  15,229,318

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0