BLASTX 7.6.2
Query= UN10005 /QuerySize=805
(804 letters)
Database: GenBank nr;
15,229,318 sequences; 5,219,829,378 total letters
Score E
Sequences producing significant alignments: (bits) Value
gi|15227957|ref|NP_179396.1| histone H1-3 [Arabidopsis thaliana] 185 7e-045
gi|297832450|ref|XP_002884107.1| hypothetical protein ARALYDRAFT... 171 1e-040
gi|189473427|gb|ACD99685.1| histone H1-like protein [Camellia si... 154 1e-035
gi|30680194|ref|NP_849970.1| histone H1-3 [Arabidopsis thaliana] 149 6e-034
gi|255629522|gb|ACU15107.1| unknown [Glycine max] 144 2e-032
gi|23506611|gb|AAN37904.1| histone H1D [Nicotiana tabacum] 142 9e-032
gi|255581422|ref|XP_002531519.1| histone h1/h5, putative [Ricinu... 142 9e-032
gi|224097142|ref|XP_002310849.1| histone H1 [Populus trichocarpa] 141 1e-031
gi|27529850|dbj|BAC53940.1| stress-inducible H1 histone-like pro... 140 3e-031
gi|729668|sp|P40267.1|H1_SOLPN RecName: Full=Histone H1 139 6e-031
gi|5726575|gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum] 138 1e-030
gi|224133758|ref|XP_002327673.1| histone H1 [Populus trichocarpa] 138 2e-030
gi|7595978|gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum ... 137 2e-030
gi|225431183|ref|XP_002270241.1| PREDICTED: hypothetical protein... 137 2e-030
gi|825521|emb|CAA77867.1| H1 histone-like protein [Solanum lycop... 136 6e-030
gi|47027093|gb|AAT08760.1| histone H1 [Hyacinthus orientalis] 131 2e-028
gi|106879565|emb|CAJ38366.1| histone H1 [Plantago major] 130 3e-028
gi|14594811|emb|CAC43291.1| putative linker histone H1 variant p... 125 1e-026
gi|116778835|gb|ABK21019.1| unknown [Picea sitchensis] 122 6e-026
gi|306016561|gb|ADM77334.1| histone H1-like protein [Picea sitch... 122 9e-026
>gi|15227957|ref|NP_179396.1| histone H1-3 [Arabidopsis thaliana]
Length = 167
Score = 185 bits (469), Expect = 7e-045
Identities = 107/166 (64%), Positives = 125/166 (75%), Gaps = 19/166 (11%)
Frame = +1
Query: 73 VKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVL 252
+KKTP A KK RKPKTTTHPPYFQMIKEALM LKEKNGSSPYAIAK+IEEK+K +L
Sbjct: 7 LKKTPAA-----KKPRKPKTTTHPPYFQMIKEALMVLKEKNGSSPYAIAKKIEEKHKSLL 61
Query: 253 PENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKK---------KKMETRS 405
PE+FRKTLSLQLKNSVAKGKLVKIRASYKLS+TT TRQQ KK K++ R+
Sbjct: 62 PESFRKTLSLQLKNSVAKGKLVKIRASYKLSDTTKMITRQQDKKNKKNMKQEDKEITKRT 121
Query: 406 KKTVSKPPEMVTKN----KRTAKKPRQLKSIKSP-GSKKVLRASAS 528
+ + ++P + V+ N KR KK RQ KSIKS G KK ++ASA+
Sbjct: 122 RSSSTRPKKTVSVNKQEKKRKVKKARQPKSIKSSVGKKKAMKASAA 167
>gi|297832450|ref|XP_002884107.1| hypothetical protein ARALYDRAFT_480711
[Arabidopsis lyrata subsp. lyrata]
Length = 161
Score = 171 bits (432), Expect = 1e-040
Identities = 95/156 (60%), Positives = 114/156 (73%), Gaps = 9/156 (5%)
Frame = +1
Query: 70 TVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPV 249
T+KKTP A KK RKPKTTTHPPYFQMIKEALM LKEKNGSSPYAIAK+IEEK+K +
Sbjct: 6 TLKKTPAA-----KKPRKPKTTTHPPYFQMIKEALMALKEKNGSSPYAIAKKIEEKHKSL 60
Query: 250 LPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQK--KKKMETRSKKTVSK 423
LPE+FRK LSLQLKNSVAKGKLVKIRASYKLS+TT TTR Q K KK M+ K+ +
Sbjct: 61 LPESFRKILSLQLKNSVAKGKLVKIRASYKLSDTTKMTTRLQDKKNKKNMKQEDKEITKR 120
Query: 424 PPEMVTKNKR--TAKKPRQLKSIKSPGSKKVLRASA 525
T++K+ + K +++ K K +++SA
Sbjct: 121 TRSSSTRSKKSMSVNKQEKMRKAKKARQPKSIKSSA 156
>gi|189473427|gb|ACD99685.1| histone H1-like protein [Camellia sinensis]
Length = 207
Score = 154 bits (389), Expect = 1e-035
Identities = 91/179 (50%), Positives = 112/179 (62%), Gaps = 27/179 (15%)
Frame = +1
Query: 61 KSPTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKY 240
+ P +K P KE KK R PK +HPPYFQMIKEAL+ L EK+GSSPYAIAK +EE++
Sbjct: 29 EKPVKEKKPRVPKE--KKPRAPKIASHPPYFQMIKEALLALNEKSGSSPYAIAKYMEEEH 86
Query: 241 KPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET------TTRTTRQQQKKKKM--- 393
KPVLPENFRK L LQLKNS AKGKL+KI+ASYKLSE TT+ ++K K+
Sbjct: 87 KPVLPENFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKDNGTTKAPMAEKKPKQARST 146
Query: 394 ---------ETRSKKTVSKPPEMVTK-------NKRTAKKPRQLKSIKSPGSKKVLRAS 522
TRS K S+ + K K T KP+QLKSIKSP +K+ +A+
Sbjct: 147 TTAARAGAPNTRSTKKKSETEKKTAKKVGPKKAKKATPGKPKQLKSIKSPAAKRARKAA 205
>gi|30680194|ref|NP_849970.1| histone H1-3 [Arabidopsis thaliana]
Length = 138
Score = 149 bits (375), Expect = 6e-034
Identities = 87/138 (63%), Positives = 104/138 (75%), Gaps = 14/138 (10%)
Frame = +1
Query: 157 MIKEALMNLKEKNGSSPYAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASY 336
MIKEALM LKEKNGSSPYAIAK+IEEK+K +LPE+FRKTLSLQLKNSVAKGKLVKIRASY
Sbjct: 1 MIKEALMVLKEKNGSSPYAIAKKIEEKHKSLLPESFRKTLSLQLKNSVAKGKLVKIRASY 60
Query: 337 KLSETTTRTTRQQQKK---------KKMETRSKKTVSKPPEMVTKN----KRTAKKPRQL 477
KLS+TT TRQQ KK K++ R++ + ++P + V+ N KR KK RQ
Sbjct: 61 KLSDTTKMITRQQDKKNKKNMKQEDKEITKRTRSSSTRPKKTVSVNKQEKKRKVKKARQP 120
Query: 478 KSIKSP-GSKKVLRASAS 528
KSIKS G KK ++ASA+
Sbjct: 121 KSIKSSVGKKKAMKASAA 138
>gi|255629522|gb|ACU15107.1| unknown [Glycine max]
Length = 202
Score = 144 bits (361), Expect = 2e-032
Identities = 83/169 (49%), Positives = 104/169 (61%), Gaps = 10/169 (5%)
Frame = +1
Query: 25 PQVFPLMAREKNKSPTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSS 204
P V + K +P +K P A KE KK ++ KT +HPPYFQMIKEAL+ L EK GSS
Sbjct: 11 PAVEKPVEEVKAPNPAKEKKPKAPKE--KKPKQAKTASHPPYFQMIKEALIALNEKGGSS 68
Query: 205 PYAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSE------TTTRTT 366
PYAIAK +EEK+K VLP NF+K L LQLKN A+GKLVKI+ASYKL+E T T
Sbjct: 69 PYAIAKYMEEKHKAVLPANFKKILGLQLKNQAARGKLVKIKASYKLTEAAKKENTAKVTK 128
Query: 367 RQQQKKKKMETRSKKTVSKPPEMVTKNKRTAKK--PRQLKSIKSPGSKK 507
+KK+ RSK + P+ KR AKK P++ K + +P K
Sbjct: 129 ATAEKKESRPKRSKTATAAAPKKTEAVKRAAKKVGPKKTKKVSTPAKPK 177
>gi|23506611|gb|AAN37904.1| histone H1D [Nicotiana tabacum]
Length = 206
Score = 142 bits (356), Expect = 9e-032
Identities = 77/163 (47%), Positives = 103/163 (63%), Gaps = 5/163 (3%)
Frame = +1
Query: 49 REKNKSPTVKKTPMASKEKPKKLRKP---KTTTHPPYFQMIKEALMNLKEKNGSSPYAIA 219
+ +++ P KK+ K + + +KP KT THPPYFQMIKEAL+ L EK GSSPYAIA
Sbjct: 21 KAEDQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIA 80
Query: 220 KQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET--TTRTTRQQQKKKKM 393
K +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLS RTT +K K
Sbjct: 81 KYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSVAGKKERTTASTKKVPKA 140
Query: 394 ETRSKKTVSKPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRAS 522
+T+ K ++ K AKK + + K G+KK+ +++
Sbjct: 141 DTKKKPRSTRSTTATAKKTEVAKKAKPTQKPKKVGAKKIRKST 183
>gi|255581422|ref|XP_002531519.1| histone h1/h5, putative [Ricinus communis]
Length = 213
Score = 142 bits (356), Expect = 9e-032
Identities = 79/172 (45%), Positives = 104/172 (60%), Gaps = 4/172 (2%)
Frame = +1
Query: 37 PLMAREKNKSPTVK--KTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPY 210
P A E+ P K K K KK ++PKT +HPPYFQMIKEAL+ L EK+GSSPY
Sbjct: 16 PPPAAEEEAKPAEKPVKEKKTKAPKEKKPKQPKTASHPPYFQMIKEALLTLNEKSGSSPY 75
Query: 211 AIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKKK 390
AIAK +EEK+K VLP NF+K L+LQLKNS A+GKL+KIRASYKLSE+ + + K
Sbjct: 76 AIAKYMEEKHKAVLPSNFKKILALQLKNSAARGKLIKIRASYKLSESNKKEKGTTKVPKA 135
Query: 391 METRSKKTVSKPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRASAS*STRKT 546
+ KK K P+ + R + + ++ K P + + A T+KT
Sbjct: 136 AKGGDKK--PKQPKTANVSTRKTRSVNKAEAAKKPAAGATKKVGAPKKTKKT 185
>gi|224097142|ref|XP_002310849.1| histone H1 [Populus trichocarpa]
Length = 179
Score = 141 bits (355), Expect = 1e-031
Identities = 73/150 (48%), Positives = 97/150 (64%), Gaps = 1/150 (0%)
Frame = +1
Query: 61 KSPTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKY 240
++P K P +EK + KPK HPPYFQMIKEA++ L +++GSSPYAIAK +EEK+
Sbjct: 27 ENPVKGKRPRTPREKKPRQPKPKPAAHPPYFQMIKEAILALNDESGSSPYAIAKYMEEKH 86
Query: 241 KPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET-TTRTTRQQQKKKKMETRSKKTV 417
K VLP NF+K L LQLKNS GKL+KIRASYKL E T+ + +K + +++ +
Sbjct: 87 KAVLPANFKKILGLQLKNSATGGKLIKIRASYKLPEAKKTKEVKPTTRKTRSVNKAEASA 146
Query: 418 SKPPEMVTKNKRTAKKPRQLKSIKSPGSKK 507
K K A KP+Q KSIKSP +K+
Sbjct: 147 KKVAGAKKAKKSAAAKPKQPKSIKSPAAKR 176
>gi|27529850|dbj|BAC53940.1| stress-inducible H1 histone-like protein [Nicotiana
tabacum]
Length = 206
Score = 140 bits (352), Expect = 3e-031
Identities = 76/163 (46%), Positives = 102/163 (62%), Gaps = 5/163 (3%)
Frame = +1
Query: 49 REKNKSPTVKKTPMASKEKPKKLRKP---KTTTHPPYFQMIKEALMNLKEKNGSSPYAIA 219
+ +++ P KK+ K + + +KP KT THPPYFQMIKEAL+ L EK GSSPYAIA
Sbjct: 21 KAEDQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIA 80
Query: 220 KQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET--TTRTTRQQQKKKKM 393
K +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLS RTT +K K
Sbjct: 81 KYMEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSVAGKKERTTASTKKVPKA 140
Query: 394 ETRSKKTVSKPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRAS 522
+T+ K ++ K KK + + K G+KK+ +++
Sbjct: 141 DTKKKPRSTRSTTATAKKTEVTKKAKPTQKPKKVGAKKIRKST 183
>gi|729668|sp|P40267.1|H1_SOLPN RecName: Full=Histone H1
Length = 202
Score = 139 bits (349), Expect = 6e-031
Identities = 77/164 (46%), Positives = 103/164 (62%), Gaps = 9/164 (5%)
Frame = +1
Query: 46 AREKNKSPTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQ 225
++ K ++P K P A KE KK + K THPPYFQMIKEAL+ L EK GSSPYA+AK
Sbjct: 20 SKVKEQAPATDKKPRAPKE--KKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAVAKY 77
Query: 226 IEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLS-----ETTTRTTRQQQKKKK 390
+E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLS ETTT+T+ +K K
Sbjct: 78 MEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTS--TKKLPK 135
Query: 391 METRSKKTVSKPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRAS 522
+++ K ++ K KK + K G+K+ +++
Sbjct: 136 ADSKKKPRSTRATATAAKKTEVPKKAKATPKPKKVGAKRTRKST 179
>gi|5726575|gb|AAD48472.1|AF170089_1 histone H1C [Nicotiana tabacum]
Length = 206
Score = 138 bits (346), Expect = 1e-030
Identities = 76/161 (47%), Positives = 99/161 (61%), Gaps = 5/161 (3%)
Frame = +1
Query: 55 KNKSPTVKKTPMASKEKPKKLRKP---KTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQ 225
+N+ P KK+ K + + +KP KT THPPYFQMIKEAL+ L EK GSSPYAIAK
Sbjct: 23 ENQPPATKKSVKEKKPRAPREKKPKSAKTVTHPPYFQMIKEALLALNEKGGSSPYAIAKY 82
Query: 226 IEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSET--TTRTTRQQQKKKKMET 399
E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLSE R T +K K ++
Sbjct: 83 TEDKHKDELPANFRKILGLQLKNSAAKGKLMKIKASYKLSEAGKKERITASTKKVPKADS 142
Query: 400 RSKKTVSKPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRAS 522
+ K ++ K KK + + K G+KK +++
Sbjct: 143 KKKPRSTRSATATAKKTEVPKKAKLTQKPKKVGAKKAKKSA 183
>gi|224133758|ref|XP_002327673.1| histone H1 [Populus trichocarpa]
Length = 202
Score = 138 bits (345), Expect = 2e-030
Identities = 77/156 (49%), Positives = 97/156 (62%), Gaps = 3/156 (1%)
Frame = +1
Query: 61 KSPTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKY 240
+ P +K P +EK + KPK HPPYFQMIKEA++ L EK+GSSPYAIAK +EEK+
Sbjct: 27 EKPLKEKKPRTPREKKPRQPKPKAVAHPPYFQMIKEAILALNEKSGSSPYAIAKYMEEKH 86
Query: 241 KPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKKKMETRSKKTVS 420
K VLP NF+K L LQLKNS A+GKL+KIRASYKLSE + K K + KKT
Sbjct: 87 KAVLPANFKKILGLQLKNSAARGKLIKIRASYKLSEAGKKEKSTTGKVSKGSSAVKKTKE 146
Query: 421 KPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRASAS 528
P M K + K K K G+KK +++A+
Sbjct: 147 VKPSM-RKTRSVNKADAGAK--KVVGAKKAKKSAAA 179
>gi|7595978|gb|AAF64525.1|AF253416_1 histone H1 variant [Solanum chilense]
Length = 202
Score = 137 bits (344), Expect = 2e-030
Identities = 77/165 (46%), Positives = 103/165 (62%), Gaps = 6/165 (3%)
Frame = +1
Query: 46 AREKNKSPTVKKTPMASKEKPKKLRKPKT---TTHPPYFQMIKEALMNLKEKNGSSPYAI 216
++ K ++P +K K + K +KPK+ THPPYFQMIKEAL+ L EK GSSPYA+
Sbjct: 15 SKVKEQAPATEKAVKEKKPRAPKEKKPKSAKAVTHPPYFQMIKEALLALNEKGGSSPYAV 74
Query: 217 AKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTR-TTRQQQKKKKM 393
AK +E+K+K LP NFRK L LQLKNS AKGKL+KI+ASYKLSE + TT + KK +
Sbjct: 75 AKYMEDKHKDELPANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTSTKKLL 134
Query: 394 ETRSKKTVSKPPEMVTKNKRT--AKKPRQLKSIKSPGSKKVLRAS 522
+ SKK T K+T KK + K G+K+ +++
Sbjct: 135 KADSKKKTRSTRATATAAKKTEVPKKAKATPKPKKVGAKRTRKST 179
>gi|225431183|ref|XP_002270241.1| PREDICTED: hypothetical protein [Vitis
vinifera]
Length = 183
Score = 137 bits (344), Expect = 2e-030
Identities = 81/153 (52%), Positives = 101/153 (66%), Gaps = 9/153 (5%)
Frame = +1
Query: 67 PTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKP 246
P +K P A KE KK ++ + ++HPPYFQMIKEAL+ L EK+GSSPYAIAK +EEK+K
Sbjct: 27 PAPEKKPKARKE--KKPKQARASSHPPYFQMIKEALLALDEKSGSSPYAIAKHMEEKHKA 84
Query: 247 VLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKKKMETR--SKKTV- 417
VLP NFRK LSLQLKNSVAKG L+KI+ASYKLS T + K+ T KK+V
Sbjct: 85 VLPANFRKILSLQLKNSVAKGNLIKIKASYKLSGVRKGTAKSDGAKRAKATSDPKKKSVK 144
Query: 418 -SKPPEMVTKN---KRTAKKPRQLKSIKSPGSK 504
S+ P+ V N K K +Q +SI+S K
Sbjct: 145 KSETPKKVAANKARKTVPSKVKQPRSIRSSAKK 177
>gi|825521|emb|CAA77867.1| H1 histone-like protein [Solanum lycopersicum]
Length = 207
Score = 136 bits (340), Expect = 6e-030
Identities = 75/154 (48%), Positives = 99/154 (64%), Gaps = 9/154 (5%)
Frame = +1
Query: 76 KKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVLP 255
+K P A KE KK + K THPPYFQMIKEAL++L EK GSSPYA+AK +E+K+K LP
Sbjct: 35 EKKPRAPKE--KKPKSAKAVTHPPYFQMIKEALLSLNEKGGSSPYAVAKYMEDKHKDELP 92
Query: 256 ENFRKTLSLQLKNSVAKGKLVKIRASYKLS-----ETTTRTTRQQQKKKKMETRSKKTVS 420
NFRK L LQLKNS AKGKL+KI+ASYKLS ETTT+T+ +K K +++ K +
Sbjct: 93 ANFRKILGLQLKNSAAKGKLIKIKASYKLSEAGKKETTTKTS--TKKLPKADSKKKPRST 150
Query: 421 KPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRAS 522
+ K KK + K G+K+ +++
Sbjct: 151 RATSTAAKKTEVPKKAKATPKPKKVGAKRTRKST 184
>gi|47027093|gb|AAT08760.1| histone H1 [Hyacinthus orientalis]
Length = 161
Score = 131 bits (328), Expect = 2e-028
Identities = 71/144 (49%), Positives = 94/144 (65%), Gaps = 4/144 (2%)
Frame = +1
Query: 79 KTPMASKE-KPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVLP 255
+ P A KE KPK +HPPYFQMIKEA++ LKEK GSSPYAIAK +E K+ VLP
Sbjct: 15 RAPKAPKEGKPKGSNSTAAPSHPPYFQMIKEAILALKEKTGSSPYAIAKYMEGKHGGVLP 74
Query: 256 ENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKKKMETRSKKTVSKPPEM 435
NFRKTL++QL+N KGKLVK++AS++LS++ + +KKK+ + K K P +
Sbjct: 75 ANFRKTLAVQLRNFATKGKLVKVKASFRLSDS---GKTDKDRKKKISAAADKKKKKKPVV 131
Query: 436 VTKNKRTAKKPRQLKSIKSPGSKK 507
A KP+Q KSIKS +K+
Sbjct: 132 KRAKMAAAAKPKQPKSIKSRAAKR 155
>gi|106879565|emb|CAJ38366.1| histone H1 [Plantago major]
Length = 164
Score = 130 bits (326), Expect = 3e-028
Identities = 73/158 (46%), Positives = 100/158 (63%), Gaps = 3/158 (1%)
Frame = +1
Query: 73 VKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIEEKYKPVL 252
V+K A++ K+ + KT HPPYF+MIKEAL+ LKE+ GSSP+AIAK +EEK+K VL
Sbjct: 7 VQKPKAAAQPAKKQSKSTKTVAHPPYFEMIKEALVALKERGGSSPHAIAKYMEEKHKAVL 66
Query: 253 PENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKKKMETRSK-KTVSKPP 429
P NFRK L LQLKNS AKGKL+KI+ASYKL+ + + ++ T+ K V KP
Sbjct: 67 PANFRKMLGLQLKNSAAKGKLIKIKASYKLAGGSAPAEKVKKPVAIAGTKRKAPEVKKPK 126
Query: 430 EMVTKNKRTAKKPRQLKSIKSPGSKKVLRASAS*STRK 543
+ V K T KK +K + P K +++ A+ +K
Sbjct: 127 KEVAPKKMTPKK--SVKKVVKPKQPKSIKSPAAKKAKK 162
>gi|14594811|emb|CAC43291.1| putative linker histone H1 variant protein [Beta
vulgaris]
Length = 202
Score = 125 bits (312), Expect = 1e-026
Identities = 67/159 (42%), Positives = 93/159 (58%), Gaps = 1/159 (0%)
Frame = +1
Query: 52 EKNKSPTVKKTPMASKEKPKKLRKPKTTTHPPYFQMIKEALMNLKEKNGSSPYAIAKQIE 231
E+ K K+K +K K +HPPYFQMIKEA++ L EK GSSPYAIAK +E
Sbjct: 26 EEKPEVDTKGRKREKKQKSSMEKKHKAPSHPPYFQMIKEAILALNEKGGSSPYAIAKFME 85
Query: 232 EKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKKKMETRSKK 411
+K+K VLP NFRK L LQLKNSV++GKL+K++ASYKLSE + + + K + + + K
Sbjct: 86 QKHKTVLPSNFRKILGLQLKNSVSRGKLIKVKASYKLSEAGKKRSEKGSKSRSSSSSTTK 145
Query: 412 TVSKPPEMVTKNKRTAKKPRQLKSIKSPGSKKVLRASAS 528
++ KR K + + I +P + A S
Sbjct: 146 -AARANAAKEPTKRRRPKSKSVSKIDNPPVNPAITARRS 183
>gi|116778835|gb|ABK21019.1| unknown [Picea sitchensis]
Length = 248
Score = 122 bits (306), Expect = 6e-026
Identities = 70/165 (42%), Positives = 102/165 (61%), Gaps = 7/165 (4%)
Frame = +1
Query: 40 LMAREKNKSPTVKKTPMASKEKPKKLRKPK----TTTHPPYFQMIKEALMNLKEKNGSSP 207
++A + K+ K A K KK + PK HPPYFQMIKEA+ LKEK GSSP
Sbjct: 22 IVAATETKADEPKAAKKAKAPKEKKPKAPKGSKPAPAHPPYFQMIKEAISALKEKGGSSP 81
Query: 208 YAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKK 387
AIAK +EEK+K VLP N++K L++Q+K V GKL K++AS+KL+E + ++ KK
Sbjct: 82 RAIAKYMEEKHKAVLPPNYKKMLAVQIKKLVLAGKLTKVKASFKLAEGVKKVPAKKPVKK 141
Query: 388 KMETRSKKTVSKPPEMVTKNKRTAKKPRQLKSI-KSPGSKKVLRA 519
++ + KT SK P++ K+ ++A KP+ K + K+P + K A
Sbjct: 142 TVKP-AAKTASK-PKIAPKSAKSASKPKTAKKVAKAPAASKTAAA 184
>gi|306016561|gb|ADM77334.1| histone H1-like protein [Picea sitchensis]
Length = 233
Score = 122 bits (304), Expect = 9e-026
Identities = 70/165 (42%), Positives = 101/165 (61%), Gaps = 7/165 (4%)
Frame = +1
Query: 40 LMAREKNKSPTVKKTPMASKEKPKKLRKPK----TTTHPPYFQMIKEALMNLKEKNGSSP 207
++A + K+ K A K KK + PK HPPYFQMIKEA+ LKEK GSSP
Sbjct: 7 IVAATETKADEPKAAKKAKAPKEKKPKAPKGSKPAPAHPPYFQMIKEAISALKEKGGSSP 66
Query: 208 YAIAKQIEEKYKPVLPENFRKTLSLQLKNSVAKGKLVKIRASYKLSETTTRTTRQQQKKK 387
AIAK +EEK+K VLP N++K L++Q+K V GKL K++AS+KL+E + ++ KK
Sbjct: 67 RAIAKYMEEKHKAVLPPNYKKMLAVQIKKLVLAGKLTKVKASFKLAEGVKKVPAKKPVKK 126
Query: 388 KMETRSKKTVSKPPEMVTKNKRTAKKPRQLKSI-KSPGSKKVLRA 519
++ + KT SK P+ K+ ++A KP+ K + K+P + K A
Sbjct: 127 TVKP-AAKTASK-PKTAPKSAKSASKPKTAKKVAKAPAASKTAAA 169
Database: GenBank nr
Posted date: Thu Sep 08 23:06:31 2011
Number of letters in database: 5,219,829,378
Number of sequences in database: 15,229,318
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,183,829,113,609
Number of Sequences: 15229318
Number of Extensions: 1183829113609
Number of Successful Extensions: 337516149
Number of sequences better than 0.0: 0
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