BLASTX 7.6.2
Query= UN10061 /QuerySize=1334
(1333 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G33340.1 | Symbols: | nucleotide binding / ub... 661 3e-190
TAIR9_protein||AT2G33340.2 | Symbols: | nucleotide binding / ub... 661 3e-190
TAIR9_protein||AT1G04510.1 | Symbols: | transducin family prote... 584 6e-167
TAIR9_protein||AT1G04510.2 | Symbols: | transducin family prote... 583 1e-166
TAIR9_protein||AT2G33340.3 | Symbols: | nucleotide binding / ub... 582 2e-166
TAIR9_protein||AT3G49660.1 | Symbols: | transducin family prote... 86 6e-017
TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular... 77 2e-014
TAIR9_protein||AT5G23430.1 | Symbols: | transducin family prote... 77 3e-014
TAIR9_protein||AT5G23430.2 | Symbols: | transducin family prote... 77 3e-014
TAIR9_protein||AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nu... 71 2e-012
TAIR9_protein||AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DE... 69 6e-012
TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family pro... 69 8e-012
TAIR9_protein||AT5G13480.1 | Symbols: FY | FY; protein binding |... 60 2e-009
TAIR9_protein||AT1G24530.1 | Symbols: | transducin family prote... 54 3e-007
>TAIR9_protein||AT2G33340.1 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126584-14131000 REVERSE
Length = 526
Score = 661 bits (1705), Expect = 3e-190
Identities = 327/350 (93%), Positives = 339/350 (96%)
Frame = +3
Query: 3 ITELTDCNAALSQKRKKRQIPETLASIDSLERFTQLSSHPLHKTNKPGICSMDILHSKDV 182
ITELTDCNAALSQKRKKRQIP+TLASID+LERFTQLSSHPLHKTNKPGICSMDILHSKDV
Sbjct: 177 ITELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDV 236
Query: 183 IATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGD 362
IATGG+D TAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR+ GD
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 363 RNYACGHTLNDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDY 542
NYACG+TLNDHSAEVRAVTVH TNKYFVSASLD TWCFYDLSSG CLA+VSDDS+ VDY
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 543 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAED 722
TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVT+ISFSENGYFLATAAED
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 723 GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPD 902
GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLG+AASDI++YQTASVKAEWNLIKTLPD
Sbjct: 417 GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPD 476
Query: 903 LSGTGKATCVKFGPDAQYVAVGSMDRNLRIFGLPGDQTANADDDSAQDS* 1052
LSGTGKATCVKFG DAQYVAVGSMDRNLRIFGLPGD+ AN DDDSAQDS*
Sbjct: 477 LSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKANVDDDSAQDS* 526
>TAIR9_protein||AT2G33340.2 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126584-14131000 REVERSE
Length = 526
Score = 661 bits (1705), Expect = 3e-190
Identities = 327/350 (93%), Positives = 339/350 (96%)
Frame = +3
Query: 3 ITELTDCNAALSQKRKKRQIPETLASIDSLERFTQLSSHPLHKTNKPGICSMDILHSKDV 182
ITELTDCNAALSQKRKKRQIP+TLASID+LERFTQLSSHPLHKTNKPGICSMDILHSKDV
Sbjct: 177 ITELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDV 236
Query: 183 IATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGD 362
IATGG+D TAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR+ GD
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 363 RNYACGHTLNDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDY 542
NYACG+TLNDHSAEVRAVTVH TNKYFVSASLD TWCFYDLSSG CLA+VSDDS+ VDY
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 543 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAED 722
TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVT+ISFSENGYFLATAAED
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 723 GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPD 902
GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLG+AASDI++YQTASVKAEWNLIKTLPD
Sbjct: 417 GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPD 476
Query: 903 LSGTGKATCVKFGPDAQYVAVGSMDRNLRIFGLPGDQTANADDDSAQDS* 1052
LSGTGKATCVKFG DAQYVAVGSMDRNLRIFGLPGD+ AN DDDSAQDS*
Sbjct: 477 LSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKANVDDDSAQDS* 526
>TAIR9_protein||AT1G04510.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:1226749-1230592 FORWARD
Length = 524
Score = 584 bits (1504), Expect = 6e-167
Identities = 295/350 (84%), Positives = 320/350 (91%), Gaps = 4/350 (1%)
Frame = +3
Query: 3 ITELTDCNAALSQKRKKRQIPETLASIDSLERFTQLSSHPLHKTNKPGICSMDILHSKDV 182
ITELTDCNAALSQ+RKKRQIP+TLAS+D+LE+FTQLSSHPLHKTNKPGI SMDILHSKDV
Sbjct: 177 ITELTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDV 236
Query: 183 IATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGD 362
IATGG+DTTAVLFDRPSGQILSTLTGHSKKVTS+KFVGD+DLVLTAS+DKTVRIW S D
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSED 296
Query: 363 RNYACGHTLNDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSER-VD 539
NY HTL DHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLA+V+D SE V+
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 540 YTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAE 719
YTAAAFHPDGLILGTGT+QS+VKIWDVKSQANVAKF GH GE+TSISFSENGYFLATAA
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAAL 416
Query: 720 DGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLP 899
DGVRLWDLRKL+NF++F DANSVEFD SGSYLG+AASDIR++Q ASVKAEWN IKTLP
Sbjct: 417 DGVRLWDLRKLKNFRTFDFPDANSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLP 476
Query: 900 DLSGTGKATCVKFGPDAQYVAVGSMDRNLRIFGLPGDQTANADDDSAQDS 1049
DLSGTGKAT VKFG D++Y+AVGSMDRNLRIFGLP D +DSAQDS
Sbjct: 477 DLSGTGKATSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNT---EDSAQDS 523
>TAIR9_protein||AT1G04510.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:1226749-1230592 FORWARD
Length = 524
Score = 583 bits (1501), Expect = 1e-166
Identities = 294/350 (84%), Positives = 320/350 (91%), Gaps = 4/350 (1%)
Frame = +3
Query: 3 ITELTDCNAALSQKRKKRQIPETLASIDSLERFTQLSSHPLHKTNKPGICSMDILHSKDV 182
ITELTDCNAALSQ+RKKRQIP+TLAS+D+LE+FTQLSSHPLHKTNKPGI SMDILHSKDV
Sbjct: 177 ITELTDCNAALSQQRKKRQIPKTLASVDALEKFTQLSSHPLHKTNKPGIFSMDILHSKDV 236
Query: 183 IATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGD 362
IATGG+DTTAVLFDRPSGQILSTLTGHSKKVTS+KFVGD+DLVLTAS+DKTVRIW S D
Sbjct: 237 IATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSED 296
Query: 363 RNYACGHTLNDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSER-VD 539
NY HTL DHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLA+V+D SE V+
Sbjct: 297 GNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAQVTDASENDVN 356
Query: 540 YTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAE 719
YTAAAFHPDGLILGTGT+QS+VKIWDVKSQANVAKF GH GE+TSISFSENGYFLATAA
Sbjct: 357 YTAAAFHPDGLILGTGTAQSIVKIWDVKSQANVAKFGGHNGEITSISFSENGYFLATAAL 416
Query: 720 DGVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLP 899
DGVRLWDLRKL+NF++F DANSVEFD SGSYLG+AASDIR++Q ASVKAEWN IKTLP
Sbjct: 417 DGVRLWDLRKLKNFRTFDFPDANSVEFDHSGSYLGIAASDIRVFQAASVKAEWNPIKTLP 476
Query: 900 DLSGTGKATCVKFGPDAQYVAVGSMDRNLRIFGLPGDQTANADDDSAQDS 1049
DLSGTGK+T VKFG D++Y+AVGSMDRNLRIFGLP D +DSAQDS
Sbjct: 477 DLSGTGKSTSVKFGLDSKYIAVGSMDRNLRIFGLPDDDNT---EDSAQDS 523
>TAIR9_protein||AT2G33340.3 | Symbols: | nucleotide binding / ubiquitin-protein
ligase | chr2:14126703-14131000 REVERSE
Length = 486
Score = 582 bits (1500), Expect = 2e-166
Identities = 288/306 (94%), Positives = 299/306 (97%)
Frame = +3
Query: 3 ITELTDCNAALSQKRKKRQIPETLASIDSLERFTQLSSHPLHKTNKPGICSMDILHSKDV 182
ITELTDCNAALSQKRKKRQIP+TLASID+LERFTQLSSHPLHKTNKPGICSMDILHSKDV
Sbjct: 177 ITELTDCNAALSQKRKKRQIPQTLASIDTLERFTQLSSHPLHKTNKPGICSMDILHSKDV 236
Query: 183 IATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGD 362
IATGG+D TAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWR+ GD
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296
Query: 363 RNYACGHTLNDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDY 542
NYACG+TLNDHSAEVRAVTVH TNKYFVSASLD TWCFYDLSSG CLA+VSDDS+ VDY
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356
Query: 543 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAED 722
TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVT+ISFSENGYFLATAAED
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416
Query: 723 GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPD 902
GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLG+AASDI++YQTASVKAEWNLIKTLPD
Sbjct: 417 GVRLWDLRKLRNFKSFLSADANSVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIKTLPD 476
Query: 903 LSGTGK 920
LSGTGK
Sbjct: 477 LSGTGK 482
>TAIR9_protein||AT3G49660.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr3:18413690-18415223 FORWARD
Length = 318
Score = 86 bits (210), Expect = 6e-017
Identities = 58/201 (28%), Positives = 96/201 (47%), Gaps = 10/201 (4%)
Frame = +3
Query: 159 DILHSKDV--IATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 332
D+ S D I + D T L+D +G ++ TL GH+ V F S+++++ S D+
Sbjct: 76 DVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDE 135
Query: 333 TVRIWRDSGDRNYACGHTLNDHSAEVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAK 512
TVRIW + + C L HS V AV + VS+S D +D +G C+
Sbjct: 136 TVRIWDVTTGK---CLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKT 192
Query: 513 VSDDSERVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFS-- 686
+ DD E + F P+G + GT + +++W++ S + + GH IS +
Sbjct: 193 LIDD-ENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFS 251
Query: 687 -ENGYFLATAAEDG-VRLWDL 743
NG + + +ED V +W+L
Sbjct: 252 VTNGKRIVSGSEDNCVHMWEL 272
>TAIR9_protein||AT5G08390.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: CUL4 RING
ubiquitin ligase complex; EXPRESSED IN: 22 plant structures; EXPRESSED
DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat-like
(InterPro:IPR011046), WD40 repeat, region (InterPro:IPR017986),
WD40/YVTN repeat-like (InterPro:IPR015943), WD40 repeat
(InterPro:IPR001680); BEST Arabidopsis thaliana protein match is:
transducin family protein / WD-40 repeat family protein
(TAIR:AT5G23430.1); Has 84267 Blast hits to 30722 proteins in 748
species: Archae - 68; Bacteria - 7813; Metazoa - 39755; Fungi - 16342;
Plants - 8110; Viruses - 6; Other Eukaryotes - 12173 (source: NCBI
BLink). | chr5:2701448-2706910 FORWARD
Length = 840
Score = 77 bits (188), Expect = 2e-014
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Frame = +3
Query: 243 LSTLTGHSKKVTSVKFVGDSDLVL-TASADKTVRIWRDSGDRNYACGHTLNDHSAEVRAV 419
L HS V +K S VL T D V +W G N +L HS+ + +V
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWA-IGKPNAIL--SLYGHSSGIDSV 65
Query: 420 TVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDYTAAAFHPDGLILGTGTSQS 599
T A+ + + T +DL + ++ R + + FHP G +G+ +
Sbjct: 66 TFDASEGLVAAGAASGTIKLWDLEEAKVVRTLT--GHRSNCVSVNFHPFGEFFASGSLDT 123
Query: 600 VVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAEDG-VRLWDL---RKLRNFKS 767
+KIWD++ + + + GHT V + F+ +G ++ + ED V++WDL + L FKS
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS 183
Query: 768 FLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPDLSGTGKAT----CVK 935
S++F P L ++D +VK W+L +T + G T C+
Sbjct: 184 H-EGKIQSLDFHPHEFLLATGSAD------KTVKF-WDL-ETFELIGSGGTETTGVRCLT 234
Query: 936 FGPDAQYVAVGSMDRNLRIF 995
F PD + V G + +L+IF
Sbjct: 235 FNPDGKSVLCG-LQESLKIF 253
>TAIR9_protein||AT5G23430.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 838
Score = 77 bits (187), Expect = 3e-014
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Frame = +3
Query: 243 LSTLTGHSKKVTSVKFVGDSDLVL-TASADKTVRIWRDSGDRNYACGHTLNDHSAEVRAV 419
L HS V +K S VL T D V +W G N +L HS+ + +V
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWA-IGKPNAIL--SLYGHSSGIDSV 65
Query: 420 TVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDYTAAAFHPDGLILGTGTSQS 599
T A+ + + T +DL + ++ R + + FHP G +G+ +
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCISVDFHPFGEFFASGSLDT 123
Query: 600 VVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAEDG-VRLWDL---RKLRNFKS 767
+KIWD++ + + + GHT V + F+ +G ++ + ED V++WDL + L FKS
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 768 FLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPDLSGTGKAT----CVK 935
S++F P L ++D +VK W+L +T + G T C+
Sbjct: 184 H-EGQIQSLDFHPHEFLLATGSAD------RTVKF-WDL-ETFELIGSGGPETAGVRCLS 234
Query: 936 FGPDAQYVAVGSMDRNLRIF 995
F PD + V G + +L+IF
Sbjct: 235 FNPDGKTVLCG-LQESLKIF 253
>TAIR9_protein||AT5G23430.2 | Symbols: | transducin family protein / WD-40
repeat family protein | chr5:7894073-7899862 REVERSE
Length = 837
Score = 77 bits (187), Expect = 3e-014
Identities = 70/260 (26%), Positives = 116/260 (44%), Gaps = 24/260 (9%)
Frame = +3
Query: 243 LSTLTGHSKKVTSVKFVGDSDLVL-TASADKTVRIWRDSGDRNYACGHTLNDHSAEVRAV 419
L HS V +K S VL T D V +W G N +L HS+ + +V
Sbjct: 9 LQEFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWA-IGKPNAIL--SLYGHSSGIDSV 65
Query: 420 TVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDYTAAAFHPDGLILGTGTSQS 599
T A+ + + T +DL + ++ R + + FHP G +G+ +
Sbjct: 66 TFDASEVLVAAGAASGTIKLWDLEEAKIVRTLT--GHRSNCISVDFHPFGEFFASGSLDT 123
Query: 600 VVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAEDG-VRLWDL---RKLRNFKS 767
+KIWD++ + + + GHT V + F+ +G ++ + ED V++WDL + L FKS
Sbjct: 124 NLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS 183
Query: 768 FLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPDLSGTGKAT----CVK 935
S++F P L ++D +VK W+L +T + G T C+
Sbjct: 184 H-EGQIQSLDFHPHEFLLATGSAD------RTVKF-WDL-ETFELIGSGGPETAGVRCLS 234
Query: 936 FGPDAQYVAVGSMDRNLRIF 995
F PD + V G + +L+IF
Sbjct: 235 FNPDGKTVLCG-LQESLKIF 253
>TAIR9_protein||AT2G41500.1 | Symbols: LIS, EMB2776 | EMB2776; nucleotide
binding | chr2:17304319-17306855 REVERSE
Length = 555
Score = 71 bits (172), Expect = 2e-012
Identities = 52/197 (26%), Positives = 81/197 (41%), Gaps = 8/197 (4%)
Frame = +3
Query: 258 GHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGDRNYACGHTLNDHSAEVRAVTVHATN 437
G + +T F D ++ T S ++W N L DH V +
Sbjct: 253 GDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIA--VLKDHKERATDVVFSPVD 310
Query: 438 KYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDYTAAAFHPDGLILGTGTSQSVVKIWD 617
+AS D T + + G L +R+ AFHP G LGT + ++WD
Sbjct: 311 DCLATASADRTAKLWK-TDGTLLQTFEGHLDRL--ARVAFHPSGKYLGTTSYDKTWRLWD 367
Query: 618 VKSQANVAKFDGHTGEVTSISFSENGYFLATAAEDGV-RLWDLRKLRNFKSFLS--ADAN 788
+ + A + +GH+ V I+F ++G A+ D + R+WDLR R+ F
Sbjct: 368 INTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVF 427
Query: 789 SVEFDPSGSYLGVAASD 839
SV F P+G +L D
Sbjct: 428 SVNFSPNGYHLASGGED 444
>TAIR9_protein||AT5G16750.1 | Symbols: TOZ | TOZ (TORMOZEMBRYO DEFECTIVE);
nucleotide binding | chr5:5504541-5509266 REVERSE
Length = 877
Score = 69 bits (167), Expect = 6e-012
Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 12/183 (6%)
Frame = +3
Query: 87 SLERFTQLSSHPLHKTNKPGICSMD-------ILHSKDVIATGGLDTTAVLFDRPSGQIL 245
SL+ ++ S P++ + + + D + + ++ TG D TA ++ P +
Sbjct: 475 SLDGISEDSEEPINLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHV 534
Query: 246 STLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRDSGDRNYACGHTLNDHSAEVRAVTV 425
TL GH +++ SV+F V+TAS DKTV+IW S + +C T H++ V +
Sbjct: 535 VTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKIWAIS---DGSCLKTFEGHTSSVLRASF 591
Query: 426 HATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDYTAAAFHPDGLILGTGTSQSVV 605
FVS D +++++ C+A ++V A A ++ TG +V+
Sbjct: 592 ITDGTQFVSCGADGLLKLWNVNTSECIATYDQHEDKV--WALAVGKKTEMIATGGGDAVI 649
Query: 606 KIW 614
+W
Sbjct: 650 NLW 652
>TAIR9_protein||AT1G61210.1 | Symbols: | WD-40 repeat family protein / katanin
p80 subunit, putative | chr1:22564785-22571555 FORWARD
Length = 1181
Score = 69 bits (166), Expect = 8e-012
Identities = 61/261 (23%), Positives = 116/261 (44%), Gaps = 20/261 (7%)
Frame = +3
Query: 234 GQILSTLTGHSKKVTSVKF-VGDSDLVLTASADKTVRIWRDSGDRNY--ACGHTLNDHSA 404
G L HS V + S L +T D V +W + CGHT +
Sbjct: 5 GYKLQEFLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHT-----S 59
Query: 405 EVRAVTVHATNKYFVSASLDSTWCFYDLSSGLCLAKVSDDSERVDYTAAAFHPDGLILGT 584
V +V + ++ + +D+ + + R + +A FHP G L +
Sbjct: 60 AVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFT--GHRSNCSAVEFHPFGEFLAS 117
Query: 585 GTSQSVVKIWDVKSQANVAKFDGHTGEVTSISFSENGYFLATAAEDG-VRLWDL---RKL 752
G+S + +KIWD++ + + + GH+ +++I F+ +G ++ + D V++WDL + L
Sbjct: 118 GSSDANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLL 177
Query: 753 RNFKSFLSADANSVEFDPSGSYLGVAASDIRLYQTASVKAEWNLIKTLPDLSGTGKATCV 932
FK F S++F P L ++D R + ++ + T P+ +G +
Sbjct: 178 HEFK-FHEGPIRSLDFHPLEFLLATGSAD-RTVKFWDLETFELIGSTRPEATG---VRSI 232
Query: 933 KFGPDAQYVAVGSMDRNLRIF 995
KF PD + + G +D +L+++
Sbjct: 233 KFHPDGRTLFCG-LDDSLKVY 252
>TAIR9_protein||AT5G13480.1 | Symbols: FY | FY; protein binding |
chr5:4326638-4331557 REVERSE
Length = 648
Score = 60 bits (145), Expect = 2e-009
Identities = 42/155 (27%), Positives = 79/155 (50%), Gaps = 5/155 (3%)
Frame = +3
Query: 153 SMDILHSKDVIATGGLDTTAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADK 332
S+D +K ++ +GG D L+D SG+ L +L GH V SVK+ + + +LTAS D+
Sbjct: 254 SVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWLLTASKDQ 313
Query: 333 TVRIWRDSGDRNYACGHTLNDHSAEVRAVTVHATN-KYFVSASLDSTWCFYDLSSGLCLA 509
++++ R + H+ +V ++ H + +YFVS S D + C + +
Sbjct: 314 IIKLY---DIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSDGSICHWIVGHENPQI 370
Query: 510 KVSDDSERVDYTAAAFHPDGLILGTGTSQSVVKIW 614
++ + + + A+HP G +L +G++ K W
Sbjct: 371 EIPNAHDNSVWD-LAWHPIGYLLCSGSNDHTTKFW 404
>TAIR9_protein||AT1G24530.1 | Symbols: | transducin family protein / WD-40
repeat family protein | chr1:8693287-8694543 FORWARD
Length = 419
Score = 54 bits (127), Expect = 3e-007
Identities = 30/99 (30%), Positives = 55/99 (55%), Gaps = 6/99 (6%)
Frame = +3
Query: 135 NKPGICSMDILHSKDVIATGGLDTTAVLFDRPSGQ----ILSTLTGHSKKVTSVKFVGDS 302
+K + ++ + V+ +G D + ++++R + L GH K + S+ V S
Sbjct: 279 HKSAVNALALNDDGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILSLFNV--S 336
Query: 303 DLVLTASADKTVRIWRDSGDRNYACGHTLNDHSAEVRAV 419
DL+L+ SAD+TVRIWR D +Y+C L+ H+ V+++
Sbjct: 337 DLLLSGSADRTVRIWRRGPDSSYSCLEVLSGHTKPVKSL 375
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,526,529,529
Number of Sequences: 33410
Number of Extensions: 5526529529
Number of Successful Extensions: 205441165
Number of sequences better than 0.0: 0
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